Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV120046.Seq
(772 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P17500 Cluster: Major capsid protein; n=15; Nucleopolyh... 173 4e-42
UniRef50_Q80LM9 Cluster: Major capsid protein VP39; n=1; Adoxoph... 115 1e-24
UniRef50_Q8QLD5 Cluster: Vp39 capsid; n=1; Mamestra configurata ... 114 2e-24
UniRef50_P35840 Cluster: Major capsid protein; n=12; Nucleopolyh... 110 3e-23
UniRef50_Q0N423 Cluster: VP39; n=1; Clanis bilineata nucleopolyh... 84 3e-15
UniRef50_Q9DWZ8 Cluster: VP39; n=2; Nucleopolyhedrovirus|Rep: VP... 68 2e-10
UniRef50_Q7T9T4 Cluster: Vp39-capsid; n=5; Granulovirus|Rep: Vp3... 56 1e-06
UniRef50_Q6QXM6 Cluster: ORF086; n=1; Agrotis segetum granulovir... 49 1e-04
UniRef50_Q0ZNY8 Cluster: Major viral capsid protein 39; n=3; Nuc... 49 1e-04
UniRef50_Q9DVV4 Cluster: PxORF79 peptide; n=1; Plutella xylostel... 48 2e-04
UniRef50_Q9PYT2 Cluster: ORF111; n=4; Granulovirus|Rep: ORF111 -... 46 8e-04
UniRef50_Q8JRX1 Cluster: Capsid protein VP39; n=1; Phthorimaea o... 39 0.12
UniRef50_P26591 Cluster: Glutamate receptor precursor; n=5; Moll... 35 2.6
UniRef50_Q8XIR0 Cluster: Cation-transporting ATPase; n=12; Clost... 34 3.4
UniRef50_Q5QBL6 Cluster: Cathepsin L; n=1; Culicoides sonorensis... 33 7.9
>UniRef50_P17500 Cluster: Major capsid protein; n=15;
Nucleopolyhedrovirus|Rep: Major capsid protein - Orgyia
pseudotsugata multicapsid polyhedrosis virus (OpMNPV)
Length = 351
Score = 173 bits (421), Expect = 4e-42
Identities = 107/246 (43%), Positives = 143/246 (58%), Gaps = 7/246 (2%)
Frame = +1
Query: 46 MALMPVGMAPRQMRVNRCIFASIVSFDACITYKSPCSPDAYHDDGWFICNSHLIKRFKMS 225
MAL+ G++ R+ N CIF +I FD+C+TY+SPCS DA DDGWFIC+ HL RFKMS
Sbjct: 1 MALVSPGVSSRRS-TNHCIFGAIEPFDSCVTYRSPCSSDASVDDGWFICDYHLKLRFKMS 59
Query: 226 KMVLPIFDEETINSK*RSLGI*LEIKKEVSSEF*FQAQPITKRCLI*TV*CKPNN*---S 396
KMVLPI+DE+ K R++ L KE + + R TV P
Sbjct: 60 KMVLPIYDEDDNQYK-RTIARHLVGHKERG----VKRILVPTRANYMTVFNLPGMMLAEQ 114
Query: 397 FI*YITTKRRLT---LYATI*NIPKFHKRHATRYTQRLRNSRSILDTTNPNTFCSRVSRD 567
I ++ RL + A++ N F + +R+IL T+P +CSRV+ D
Sbjct: 115 LIFHLIYDNRLEVNRICASLKNNENFIDNTYSVVESVYSATRNILSLTDPQAYCSRVAND 174
Query: 568 ELRFFDVTNA-RTHRGGVGDQLFNNYSGFLQNLIRRAVAPEYLQIDTEELRFRNSATCII 744
++RFFD ++ G GD +FNN GFL+NLIRRAVAPE LQID+E+LR RN TC+I
Sbjct: 175 DVRFFDANVVDNNYQAGNGDTVFNNMPGFLRNLIRRAVAPETLQIDSEDLRLRNCNTCVI 234
Query: 745 DETGLV 762
+ TGLV
Sbjct: 235 NNTGLV 240
Score = 100 bits (240), Expect = 3e-20
Identities = 47/69 (68%), Positives = 54/69 (78%)
Frame = +3
Query: 255 DNQFKMTIARHLVGNKERGIKRILIPSATNYQEVFNLNSMMQAEQLIFHLIYNNEEAVNV 434
DNQ+K TIARHLVG+KERG+KRIL+P+ NY VFNL MM AEQLIFHLIY+N VN
Sbjct: 70 DNQYKRTIARHLVGHKERGVKRILVPTRANYMTVFNLPGMMLAEQLIFHLIYDNRLEVNR 129
Query: 435 ICDNLKYTE 461
IC +LK E
Sbjct: 130 ICASLKNNE 138
>UniRef50_Q80LM9 Cluster: Major capsid protein VP39; n=1; Adoxophyes
honmai NPV|Rep: Major capsid protein VP39 - Adoxophyes
honmai nucleopolyhedrovirus
Length = 312
Score = 115 bits (277), Expect = 1e-24
Identities = 85/242 (35%), Positives = 121/242 (50%), Gaps = 3/242 (1%)
Frame = +1
Query: 46 MALMPVGMAPRQMRVNRCIFASIVSFDACITYKSPCSPDAYHDDGWFICNSHLIKRFKMS 225
MAL+P G+ + N CIFA + SFDAC Y + CS DA +DGW+IC H FKM
Sbjct: 1 MALVPAGLTSSRSNSN-CIFAGVQSFDACYRYPNECSKDADSNDGWYICEYHASVHFKME 59
Query: 226 KMVLPIFDEETINSK*RSLGI*LEIKKEVSSEF*FQAQPITKRCLI*TV*CKPNN*SFI* 405
KM L I D + R++G L E + ++ V P + I
Sbjct: 60 KMSLAIPDADN-KVLFRTVGRSLVKHTEEGTARILVPNKNNYESVL-NVQDLPLAEALII 117
Query: 406 YITTKRRLTLYATI*NIPKFHKRHATRY--TQRL-RNSRSILDTTNPNTFCSRVSRDELR 576
++ + L I KF + A RY Q+L N+ S+L+ NP+ FC+ VS LR
Sbjct: 118 HMIYE-NLEKQKEICERLKFTEHFADRYKNVQKLYSNTMSVLNMANPDHFCAEVSLTSLR 176
Query: 577 FFDVTNARTHRGGVGDQLFNNYSGFLQNLIRRAVAPEYLQIDTEELRFRNSATCIIDETG 756
F + D F + F++NL+ +AVAPE ++I TE++ RN +TCII+ TG
Sbjct: 177 QF---SNEIGNEPAQDTNFELFPKFIKNLVTKAVAPEIMKIGTEDIYIRNCSTCIINSTG 233
Query: 757 LV 762
LV
Sbjct: 234 LV 235
Score = 64.9 bits (151), Expect = 2e-09
Identities = 29/63 (46%), Positives = 39/63 (61%)
Frame = +3
Query: 273 TIARHLVGNKERGIKRILIPSATNYQEVFNLNSMMQAEQLIFHLIYNNEEAVNVICDNLK 452
T+ R LV + E G RIL+P+ NY+ V N+ + AE LI H+IY N E IC+ LK
Sbjct: 76 TVGRSLVKHTEEGTARILVPNKNNYESVLNVQDLPLAEALIIHMIYENLEKQKEICERLK 135
Query: 453 YTE 461
+TE
Sbjct: 136 FTE 138
>UniRef50_Q8QLD5 Cluster: Vp39 capsid; n=1; Mamestra configurata
NPV-A|Rep: Vp39 capsid - Mamestra configurata NPV-A
Length = 325
Score = 114 bits (275), Expect = 2e-24
Identities = 85/242 (35%), Positives = 120/242 (49%), Gaps = 3/242 (1%)
Frame = +1
Query: 46 MALMPVGMAPRQMRVNRCIFASIVSFDACITYKSPCSPDAYHDDGWFICNSHLIKRFKMS 225
MAL P G Q + N CIF +I FD C TY SPCS DA +DGWFIC HL RF+M
Sbjct: 1 MALTPYGS--NQPQSNNCIFGAIRPFDTCRTYSSPCSNDASQEDGWFICEYHLSIRFRME 58
Query: 226 KMVLPIFDEE-TINSK*RSLGI*LEIKKEVSSEF*FQAQPITKRCLI*TV*CKPNN*SF- 399
KMVLPI D E TI + RS+G L I S+ + + L P F
Sbjct: 59 KMVLPIPDAEGTIYN--RSVGKSL-ISGTESNRVLIPTKTNYEDVLKLPSMSLPEQLIFH 115
Query: 400 I*YITTKRRLTLYATI*NIPKFHKRHATRYTQRLRN-SRSILDTTNPNTFCSRVSRDELR 576
+ Y ++ + + FH + +R+ N + +L TNP FC+RV+ + R
Sbjct: 116 MIYDEPDKQNEICKLLQYNENFHS-DLYKVVERVYNKTAEVLAKTNPERFCARVNINNFR 174
Query: 577 FFDVTNARTHRGGVGDQLFNNYSGFLQNLIRRAVAPEYLQIDTEELRFRNSATCIIDETG 756
+ + + + +N GFL+NLI ++VAP + + RN+ATC I++ G
Sbjct: 175 SYGTAD----ETDIANVTYNAMPGFLKNLINKSVAPCTMDFPGGTINLRNAATCAINQQG 230
Query: 757 LV 762
LV
Sbjct: 231 LV 232
Score = 58.0 bits (134), Expect = 2e-07
Identities = 27/66 (40%), Positives = 40/66 (60%)
Frame = +3
Query: 264 FKMTIARHLVGNKERGIKRILIPSATNYQEVFNLNSMMQAEQLIFHLIYNNEEAVNVICD 443
+ ++ + L+ E R+LIP+ TNY++V L SM EQLIFH+IY+ + N IC
Sbjct: 72 YNRSVGKSLISGTESN--RVLIPTKTNYEDVLKLPSMSLPEQLIFHMIYDEPDKQNEICK 129
Query: 444 NLKYTE 461
L+Y E
Sbjct: 130 LLQYNE 135
>UniRef50_P35840 Cluster: Major capsid protein; n=12;
Nucleopolyhedrovirus|Rep: Major capsid protein -
Lymantria dispar multicapsid nuclear polyhedrosis virus
(LdMNPV)
Length = 356
Score = 110 bits (265), Expect = 3e-23
Identities = 77/241 (31%), Positives = 121/241 (50%), Gaps = 2/241 (0%)
Frame = +1
Query: 46 MALMPVGMAPRQMRVNRCIFASIVSFDACITYKSPCSPDAYHDDGWFICNSHLIKRFKMS 225
MAL+ ++ ++R N C+F ++ FD C Y SPCSPD+ ++DGWFIC+ H RFK+
Sbjct: 1 MALVSGALSTNRLR-NYCVFGAVQPFDNCRAYGSPCSPDSTNNDGWFICDYHSSIRFKIE 59
Query: 226 KMVLPIFDEETINSK*RSLGI*LEIKKEV-SSEF*FQAQPITKRCL-I*TV*CKPNN*SF 399
KMVLPI D E N R++G L K + ++ + K L + ++ +
Sbjct: 60 KMVLPIPDAEG-NIYNRTVGKSLVNHKTLGAARVLIPTRDNYKTVLNLNSMSLAEQLVTH 118
Query: 400 I*YITTKRRLTLYATI*NIPKFHKRHATRYTQRLRNSRSILDTTNPNTFCSRVSRDELRF 579
+ Y + + + + + F + +IL TNP +CS+V+ + R
Sbjct: 119 MIYDNVEAQGAVCKALQHNENFQTETYRLAEDMFNRTSAILAMTNPRRYCSQVNSNYARI 178
Query: 580 FDVTNARTHRGGVGDQLFNNYSGFLQNLIRRAVAPEYLQIDTEELRFRNSATCIIDETGL 759
+ + V +F + FL+NLI AVAPE + ID + L RN TC ID++GL
Sbjct: 179 WTTDDV-----NVAGNVFESMPPFLKNLINVAVAPEQIMIDEKTLVIRNCPTCNIDDSGL 233
Query: 760 V 762
V
Sbjct: 234 V 234
Score = 69.7 bits (163), Expect = 7e-11
Identities = 31/68 (45%), Positives = 44/68 (64%)
Frame = +3
Query: 258 NQFKMTIARHLVGNKERGIKRILIPSATNYQEVFNLNSMMQAEQLIFHLIYNNEEAVNVI 437
N + T+ + LV +K G R+LIP+ NY+ V NLNSM AEQL+ H+IY+N EA +
Sbjct: 71 NIYNRTVGKSLVNHKTLGAARVLIPTRDNYKTVLNLNSMSLAEQLVTHMIYDNVEAQGAV 130
Query: 438 CDNLKYTE 461
C L++ E
Sbjct: 131 CKALQHNE 138
>UniRef50_Q0N423 Cluster: VP39; n=1; Clanis bilineata
nucleopolyhedrosis virus|Rep: VP39 - Clanis bilineata
nucleopolyhedrosis virus
Length = 350
Score = 84.2 bits (199), Expect = 3e-15
Identities = 40/70 (57%), Positives = 49/70 (70%)
Frame = +1
Query: 46 MALMPVGMAPRQMRVNRCIFASIVSFDACITYKSPCSPDAYHDDGWFICNSHLIKRFKMS 225
MAL+ GMA ++ N CIF S+ FDAC Y+SPCS DA ++DGW IC+ HL RFKM
Sbjct: 1 MALVVSGMATGRIN-NYCIFGSVQPFDACGPYRSPCSDDAKNNDGWLICDYHLSTRFKME 59
Query: 226 KMVLPIFDEE 255
KMVLPI D +
Sbjct: 60 KMVLPIPDAD 69
Score = 72.1 bits (169), Expect = 1e-11
Identities = 38/83 (45%), Positives = 50/83 (60%)
Frame = +1
Query: 514 SILDTTNPNTFCSRVSRDELRFFDVTNARTHRGGVGDQLFNNYSGFLQNLIRRAVAPEYL 693
+I+ PN +CSR + R + VT+ VG Q+FN FLQNLI +AV PE +
Sbjct: 157 AIMAMVTPNRYCSRPLYTDDRIWSVTD----ENNVGGQVFNEMPPFLQNLISKAVGPEIM 212
Query: 694 QIDTEELRFRNSATCIIDETGLV 762
QI+ EEL RN ATC I ++GLV
Sbjct: 213 QIENEELLLRNCATCHITQSGLV 235
Score = 59.7 bits (138), Expect = 8e-08
Identities = 28/63 (44%), Positives = 40/63 (63%)
Frame = +3
Query: 273 TIARHLVGNKERGIKRILIPSATNYQEVFNLNSMMQAEQLIFHLIYNNEEAVNVICDNLK 452
T+AR LV +K G +RIL+P+ NY V N+ ++ AEQ IFH+IY N+ IC L+
Sbjct: 76 TLARSLVNHKAIGDERILVPTKRNYMSVLNILALQLAEQYIFHIIYENDVERERICQMLE 135
Query: 453 YTE 461
+E
Sbjct: 136 ISE 138
>UniRef50_Q9DWZ8 Cluster: VP39; n=2; Nucleopolyhedrovirus|Rep: VP39
- Spodoptera litura multicapsid nucleopolyhedrovirus
(SpltMNPV)
Length = 302
Score = 68.1 bits (159), Expect = 2e-10
Identities = 66/241 (27%), Positives = 108/241 (44%), Gaps = 3/241 (1%)
Frame = +1
Query: 46 MALMPVGMAPRQMRVNRCIFASI--VSFDACITYKSPCSPDAYHDDGWFICNSHLIKRFK 219
MAL+ G A +M+ N CIF + + F+ C Y+SPCS DA +DG F+C HL + FK
Sbjct: 1 MALVSGGNANSRMK-NYCIFQGVRPIEFNQCSNYRSPCSDDASQNDGVFMCQYHLSRFFK 59
Query: 220 MSKMVLPIFDEETINSK*RSLGI*LEIKKEVSSEF*FQAQPITKRCLI*TV*CKPNN*SF 399
+ K + I D T R +G L +++ + ++ V P
Sbjct: 60 IEKTSIAIPD-GTGQKLYRIVGKSLVSHNARANDRILIPTQENYQAVM-NVSMLPPAERL 117
Query: 400 I*YITTKRRLTLYATI*NIPKFHKRHATRYTQRLRN-SRSILDTTNPNTFCSRVSRDELR 576
+ ++ R T A I N + + + + + + + I+ T+P FCS V+ +++R
Sbjct: 118 VLHLIYNNR-TAAAEICNQLRQQENFRSDVVENVTSMAYRIIQITDPEAFCSVVASNDIR 176
Query: 577 FFDVTNARTHRGGVGDQLFNNYSGFLQNLIRRAVAPEYLQIDTEELRFRNSATCIIDETG 756
F T + +N+ F++NLI VAPE L + + AT I G
Sbjct: 177 SFGNEADLT-------RTYNSLPPFIKNLINTLVAPEVLTLGNNTFPLKACATVSITTNG 229
Query: 757 L 759
L
Sbjct: 230 L 230
Score = 59.3 bits (137), Expect = 1e-07
Identities = 27/62 (43%), Positives = 38/62 (61%)
Frame = +3
Query: 276 IARHLVGNKERGIKRILIPSATNYQEVFNLNSMMQAEQLIFHLIYNNEEAVNVICDNLKY 455
+ + LV + R RILIP+ NYQ V N++ + AE+L+ HLIYNN A IC+ L+
Sbjct: 79 VGKSLVSHNARANDRILIPTQENYQAVMNVSMLPPAERLVLHLIYNNRTAAAEICNQLRQ 138
Query: 456 TE 461
E
Sbjct: 139 QE 140
>UniRef50_Q7T9T4 Cluster: Vp39-capsid; n=5; Granulovirus|Rep:
Vp39-capsid - Adoxophyes orana granulovirus (AoGV)
Length = 291
Score = 55.6 bits (128), Expect = 1e-06
Identities = 67/241 (27%), Positives = 101/241 (41%), Gaps = 8/241 (3%)
Frame = +1
Query: 61 VGMAPRQMRVNRCIFASIVS----FDACITYKSPCSPDAYHD--DGWFICNSHLIKRFKM 222
+ + P ++ N CIF +V + C Y SPCSPDA + DG FICN HL K FK+
Sbjct: 4 INVGPCELN-NYCIFQGVVGMMPDYYRCENYSSPCSPDASNSNLDGTFICNYHLNKYFKI 62
Query: 223 SKMVLPIFDEETINSK*RSLGI*LEIKKEVSSEF*FQAQPITKRCLI*TV*CKPNN*SFI 402
K I + S +G L + + + P+ + T I
Sbjct: 63 LKSSFRIPSGKDNKSFKMLVGQSLLQQTDNDTNKNKVLIPLDHELYLKTSSRNSVERMII 122
Query: 403 *YI-TTKRRLTLYATI*NIPKFHKRHATRYTQRLRNSRSILDTTNPNTFCSRVSRD-ELR 576
I K ++ I +F ++ A Q N+ I+ NP+ C R++ + E R
Sbjct: 123 YTIYNDKEKIKDLCDILMKQEFFEQPAWAAFQITLNT--IMGLVNPSMLCERLTTNKENR 180
Query: 577 FFDVTNARTHRGGVGDQLFNNYSGFLQNLIRRAVAPEYLQIDTEELRFRNSATCIIDETG 756
F N T+ +N +S FL+NLI R V P + I+ ++ N TC G
Sbjct: 181 VF---NNETY--------YNQFSPFLKNLINRLVRPITMTINNYVIKIDNVDTCNFTSDG 229
Query: 757 L 759
L
Sbjct: 230 L 230
Score = 34.7 bits (76), Expect = 2.6
Identities = 19/81 (23%), Positives = 40/81 (49%), Gaps = 1/81 (1%)
Frame = +3
Query: 222 VKNGFAHFRRRDNQ-FKMTIARHLVGNKERGIKRILIPSATNYQEVFNLNSMMQAEQLIF 398
+K+ F +DN+ FKM + + L+ + + + +++ +S E++I
Sbjct: 63 LKSSFRIPSGKDNKSFKMLVGQSLLQQTDNDTNKNKVLIPLDHELYLKTSSRNSVERMII 122
Query: 399 HLIYNNEEAVNVICDNLKYTE 461
+ IYN++E + +CD L E
Sbjct: 123 YTIYNDKEKIKDLCDILMKQE 143
>UniRef50_Q6QXM6 Cluster: ORF086; n=1; Agrotis segetum
granulovirus|Rep: ORF086 - Agrotis segetum granulosis
virus (AsGV) (Agrotis segetumgranulovirus)
Length = 292
Score = 49.2 bits (112), Expect = 1e-04
Identities = 26/53 (49%), Positives = 30/53 (56%), Gaps = 2/53 (3%)
Frame = +1
Query: 91 NRCIFASIV--SFDACITYKSPCSPDAYHDDGWFICNSHLIKRFKMSKMVLPI 243
N CIF + F C Y+ PC Y+DDG FIC HL K FKM KMV+ I
Sbjct: 12 NLCIFQGVQPPEFLNCRPYEPPCI-QPYNDDGTFICQYHLAKYFKMEKMVVRI 63
Score = 38.7 bits (86), Expect = 0.16
Identities = 25/83 (30%), Positives = 38/83 (45%), Gaps = 1/83 (1%)
Frame = +1
Query: 517 ILDTTNPNTFCSRVSRDELRFFDVTNARTHRGGVGDQLFNNYSGFLQNLIRRAVAPEYLQ 696
I+ NP +C ++R FD GV +F+ FL+NLIR V P+ +
Sbjct: 153 IMGLINPAIYCRPEIIRDIRSFD----NPPGNGVQTAVFDQMPPFLKNLIRLTVRPQTMT 208
Query: 697 IDTEELRFRNSATC-IIDETGLV 762
+ +L TC ++ E GLV
Sbjct: 209 VSNTQLLLAQVPTCDLVPERGLV 231
>UniRef50_Q0ZNY8 Cluster: Major viral capsid protein 39; n=3;
Nucleopolyhedrovirus|Rep: Major viral capsid protein 39
- Neodiprion abietis nucleopolyhedrovirus
Length = 315
Score = 48.8 bits (111), Expect = 1e-04
Identities = 16/45 (35%), Positives = 33/45 (73%)
Frame = +3
Query: 318 RILIPSATNYQEVFNLNSMMQAEQLIFHLIYNNEEAVNVICDNLK 452
R+++P+ NY+++F + + + QL+FHL+Y N+ A++ IC ++K
Sbjct: 104 RVIVPTRRNYEDIFKVAYLPISYQLVFHLLYQNQSAIDKICQDVK 148
>UniRef50_Q9DVV4 Cluster: PxORF79 peptide; n=1; Plutella xylostella
granulovirus|Rep: PxORF79 peptide - Plutella xylostella
granulovirus
Length = 320
Score = 48.4 bits (110), Expect = 2e-04
Identities = 28/62 (45%), Positives = 35/62 (56%), Gaps = 3/62 (4%)
Frame = +1
Query: 67 MAPRQMRV-NRCIFASIVSFDA--CITYKSPCSPDAYHDDGWFICNSHLIKRFKMSKMVL 237
M+ RQ RV N CIF ++ ++ C CS DA +DDG FICN HL F + KM L
Sbjct: 2 MSLRQNRVYNNCIFQAVSYSNSSLCADPVLHCSKDASNDDGTFICNHHLSMYFPLEKMTL 61
Query: 238 PI 243
I
Sbjct: 62 EI 63
Score = 37.1 bits (82), Expect = 0.48
Identities = 20/68 (29%), Positives = 36/68 (52%), Gaps = 5/68 (7%)
Frame = +3
Query: 264 FKMTIARHLVGNKERGIKRILIPSATNYQEVFNLNSMMQAEQLIFHLIYNNEEA-----V 428
FK+ I + LV ++ + I+IPS NY + +N+M AE+ I + IY +
Sbjct: 71 FKLLIGKSLV--QQDATRNIIIPSKANYIDYLRVNNMSPAEKFIMYSIYGESATEPTGLI 128
Query: 429 NVICDNLK 452
+C++L+
Sbjct: 129 TQLCESLR 136
>UniRef50_Q9PYT2 Cluster: ORF111; n=4; Granulovirus|Rep: ORF111 -
Xestia c-nigrum granulosis virus (XnGV) (Xestia
c-nigrumgranulovirus)
Length = 329
Score = 46.4 bits (105), Expect = 8e-04
Identities = 22/53 (41%), Positives = 28/53 (52%), Gaps = 2/53 (3%)
Frame = +1
Query: 91 NRCIFASIV--SFDACITYKSPCSPDAYHDDGWFICNSHLIKRFKMSKMVLPI 243
N CIF + F C Y PCS D + DG F+C+ HL + FK+ K V I
Sbjct: 16 NLCIFQGVQPPEFMNCGIYTPPCSDDCVNKDGTFVCSYHLARYFKLKKEVFEI 68
Score = 41.1 bits (92), Expect = 0.030
Identities = 26/84 (30%), Positives = 40/84 (47%), Gaps = 1/84 (1%)
Frame = +1
Query: 514 SILDTTNPNTFCSRVSRDELRFFDVTNARTHRGGVGDQLFNNYSGFLQNLIRRAVAPEYL 693
S++ P+ C + +R F + R + + F F++NLI R V P L
Sbjct: 183 SLMGAIKPSIICRPTREETVRTFSSNDNR--QPDENQRAFEAMPNFIKNLIMRLVRPVTL 240
Query: 694 QIDTEELRFRNSATCIID-ETGLV 762
QI + EL SATC I+ + GL+
Sbjct: 241 QIGSTELILDQSATCRIEPQQGLI 264
Score = 34.7 bits (76), Expect = 2.6
Identities = 16/58 (27%), Positives = 27/58 (46%)
Frame = +3
Query: 255 DNQFKMTIARHLVGNKERGIKRILIPSATNYQEVFNLNSMMQAEQLIFHLIYNNEEAV 428
+ FK + L+ RI IP+ NY N+ +M E+ +F+ IY+ + V
Sbjct: 74 NTSFKYLVGVSLIQQNVPTANRITIPAKDNYYSYLNVANMSSMEKYVFYSIYDEPDTV 131
>UniRef50_Q8JRX1 Cluster: Capsid protein VP39; n=1; Phthorimaea
operculella granulovirus|Rep: Capsid protein VP39 -
Phthorimaea operculella granulovirus
Length = 293
Score = 39.1 bits (87), Expect = 0.12
Identities = 23/49 (46%), Positives = 27/49 (55%), Gaps = 3/49 (6%)
Frame = +1
Query: 91 NRCIFASI-VSFDACITYKSPCSPDAYHD--DGWFICNSHLIKRFKMSK 228
N CIF + FD C Y CS DA + DG FICN HL K F++ K
Sbjct: 13 NYCIFQGVNYQFD-CDGYTRQCSEDARYSQLDGTFICNFHLGKYFRILK 60
Score = 34.3 bits (75), Expect = 3.4
Identities = 20/62 (32%), Positives = 27/62 (43%)
Frame = +1
Query: 574 RFFDVTNARTHRGGVGDQLFNNYSGFLQNLIRRAVAPEYLQIDTEELRFRNSATCIIDET 753
R F A+ D+ F FLQNL++ V P L+I T L + TC +
Sbjct: 169 RLFCPPKAKMLYSYTSDESFKKLPKFLQNLVQCLVKPVKLEIGTFSLVLETANTCSFTDN 228
Query: 754 GL 759
GL
Sbjct: 229 GL 230
>UniRef50_P26591 Cluster: Glutamate receptor precursor; n=5;
Mollusca|Rep: Glutamate receptor precursor - Lymnaea
stagnalis (Great pond snail)
Length = 917
Score = 34.7 bits (76), Expect = 2.6
Identities = 18/52 (34%), Positives = 29/52 (55%), Gaps = 4/52 (7%)
Frame = +1
Query: 454 IPKFHKRHATRYTQRLRNSRSILDTTN----PNTFCSRVSRDELRFFDVTNA 597
I F++ ++ Y +L+N +ILD T+ N C +SR +L F V+NA
Sbjct: 45 IHMFNRAYSHVYRYKLKNDTTILDVTDSFAVSNALCHHLSRGDLAIFGVSNA 96
>UniRef50_Q8XIR0 Cluster: Cation-transporting ATPase; n=12;
Clostridium|Rep: Cation-transporting ATPase -
Clostridium perfringens
Length = 849
Score = 34.3 bits (75), Expect = 3.4
Identities = 18/54 (33%), Positives = 32/54 (59%)
Frame = -3
Query: 344 IGCAWN*NSLDTSFFISN*MPSDRHFELIVSSSKMGKTIFDILKRLMRWLLQIN 183
IG A + D + S+ + D +FE IVS+ + G+ I+D +++ +R+LL N
Sbjct: 604 IGVAMGISGTDVTKEASSMILMDDNFETIVSAVEEGRIIYDNIRKFIRYLLSCN 657
>UniRef50_Q5QBL6 Cluster: Cathepsin L; n=1; Culicoides
sonorensis|Rep: Cathepsin L - Culicoides sonorensis
Length = 331
Score = 33.1 bits (72), Expect = 7.9
Identities = 13/39 (33%), Positives = 24/39 (61%)
Frame = +1
Query: 622 DQLFNNYSGFLQNLIRRAVAPEYLQIDTEELRFRNSATC 738
++L N G+++ +RR +APE DT+++ +N A C
Sbjct: 99 NELMTNADGWIEKPLRRQLAPESYAWDTKDVPVKNQAQC 137
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 765,296,106
Number of Sequences: 1657284
Number of extensions: 14859291
Number of successful extensions: 36294
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 35094
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 36279
length of database: 575,637,011
effective HSP length: 99
effective length of database: 411,565,895
effective search space used: 64615845515
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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