Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NRPG0026
(455 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q1HRW2 Cluster: CCAAT-binding factor, subunit A; n=2; C... 47 2e-04
UniRef50_UPI0000519ECA Cluster: PREDICTED: similar to Nuclear tr... 45 9e-04
UniRef50_O76256 Cluster: Nuclear factor Y transcription factor s... 43 0.004
UniRef50_P25208 Cluster: Nuclear transcription factor Y subunit ... 42 0.008
UniRef50_Q8ST61 Cluster: RH50436p; n=2; Sophophora|Rep: RH50436p... 41 0.015
UniRef50_Q9FGJ3 Cluster: Nuclear transcription factor Y subunit ... 40 0.025
UniRef50_Q7E0Y8 Cluster: CCAAT-binding protein; n=3; Oryza sativ... 40 0.034
UniRef50_Q05KQ3 Cluster: Heading date 5; n=5; Oryza sativa|Rep: ... 39 0.059
UniRef50_Q84W66 Cluster: Nuclear transcription factor Y subunit ... 38 0.077
UniRef50_Q67XJ2 Cluster: Nuclear transcription factor Y subunit ... 37 0.18
UniRef50_Q8VYK4 Cluster: Nuclear transcription factor Y subunit ... 37 0.18
UniRef50_A7NW33 Cluster: Chromosome chr5 scaffold_2, whole genom... 37 0.24
UniRef50_P13434 Cluster: Transcriptional activator HAP3; n=3; Sa... 37 0.24
UniRef50_A7PL27 Cluster: Chromosome chr7 scaffold_20, whole geno... 36 0.31
UniRef50_Q4H329 Cluster: Transcription factor protein; n=1; Cion... 36 0.55
UniRef50_Q22AL0 Cluster: Histone-like transcription factor (CBF/... 36 0.55
UniRef50_A7PTW4 Cluster: Chromosome chr7 scaffold_31, whole geno... 35 0.72
UniRef50_Q94EJ7 Cluster: Leafy cotyledon1; n=4; Poaceae|Rep: Lea... 35 0.95
UniRef50_Q6C4Q0 Cluster: Similarities with DEHA0C03817g Debaryom... 35 0.95
UniRef50_Q9SIT9 Cluster: Nuclear transcription factor Y subunit ... 35 0.95
UniRef50_Q76FX3 Cluster: CCAAT-box binding factor HAP3 homolog; ... 34 1.3
UniRef50_Q5KGK8 Cluster: Transcriptional activator, putative; n=... 34 1.3
UniRef50_A5DAN8 Cluster: Putative uncharacterized protein; n=2; ... 34 1.7
UniRef50_Q96WP0 Cluster: CCAAT-binding protein subunit HAP3; n=8... 33 2.2
UniRef50_Q65XK1 Cluster: Nuclear transcription factor Y subunit ... 33 2.2
UniRef50_Q84528 Cluster: A208R protein; n=1; Paramecium bursaria... 33 3.8
UniRef50_Q461Z9 Cluster: Putative uncharacterized protein; n=1; ... 33 3.8
UniRef50_O82248 Cluster: Nuclear transcription factor Y subunit ... 33 3.8
UniRef50_Q91F97 Cluster: 428L; n=1; Invertebrate iridescent viru... 32 5.1
UniRef50_Q92611 Cluster: ER degradation-enhancing alpha-mannosid... 32 5.1
UniRef50_UPI0000E487FF Cluster: PREDICTED: similar to Transcript... 32 6.7
UniRef50_Q8I2Y8 Cluster: Putative uncharacterized protein PFI080... 32 6.7
UniRef50_Q54Y18 Cluster: Bromodomain-containing protein; n=1; Di... 32 6.7
UniRef50_P38966 Cluster: Uncharacterized protein YDR089W; n=2; S... 32 6.7
UniRef50_Q48IS0 Cluster: Putative uncharacterized protein; n=1; ... 31 8.9
UniRef50_Q5CGD1 Cluster: Aspartyl (Acid) protease; n=2; Cryptosp... 31 8.9
UniRef50_Q54RC1 Cluster: Putative asparaginase 2; n=1; Dictyoste... 31 8.9
UniRef50_A5K5C2 Cluster: CCAAT-box DNA binding protein subunit B... 31 8.9
>UniRef50_Q1HRW2 Cluster: CCAAT-binding factor, subunit A; n=2;
Culicidae|Rep: CCAAT-binding factor, subunit A - Aedes
aegypti (Yellowfever mosquito)
Length = 184
Score = 46.8 bits (106), Expect = 2e-04
Identities = 24/40 (60%), Positives = 28/40 (70%), Gaps = 4/40 (10%)
Frame = +1
Query: 346 DVLEDENNSDSGS----KSNAPLREQDRFLPIANIAKIMK 453
D ++ N+ DSG+ K PLREQDRFLPIANI KIMK
Sbjct: 13 DEIDGLNSDDSGAEHLHKPGVPLREQDRFLPIANITKIMK 52
>UniRef50_UPI0000519ECA Cluster: PREDICTED: similar to Nuclear
transcription factor Y subunit beta (Nuclear
transcription factor Y subunit B) (NF-YB) (CAAT-box
DNA-binding protein subunit B); n=2; Endopterygota|Rep:
PREDICTED: similar to Nuclear transcription factor Y
subunit beta (Nuclear transcription factor Y subunit B)
(NF-YB) (CAAT-box DNA-binding protein subunit B) - Apis
mellifera
Length = 219
Score = 44.8 bits (101), Expect = 9e-04
Identities = 28/53 (52%), Positives = 33/53 (62%), Gaps = 13/53 (24%)
Frame = +1
Query: 334 VNSDDVLEDENNSD------------SGSKS-NAPLREQDRFLPIANIAKIMK 453
V SDD+ +D N+D +GS S PLREQDRFLPIAN+AKIMK
Sbjct: 32 VQSDDMEDDPENTDDSNHGASDPLQGAGSGSVGGPLREQDRFLPIANVAKIMK 84
>UniRef50_O76256 Cluster: Nuclear factor Y transcription factor
subunit B homolog; n=2; Schistosoma|Rep: Nuclear factor
Y transcription factor subunit B homolog - Schistosoma
mansoni (Blood fluke)
Length = 242
Score = 42.7 bits (96), Expect = 0.004
Identities = 19/24 (79%), Positives = 21/24 (87%)
Frame = +1
Query: 382 SKSNAPLREQDRFLPIANIAKIMK 453
S + PLREQDRFLPIAN+AKIMK
Sbjct: 16 SNRDHPLREQDRFLPIANVAKIMK 39
>UniRef50_P25208 Cluster: Nuclear transcription factor Y subunit
beta; n=41; Deuterostomia|Rep: Nuclear transcription
factor Y subunit beta - Homo sapiens (Human)
Length = 207
Score = 41.5 bits (93), Expect = 0.008
Identities = 24/69 (34%), Positives = 36/69 (52%), Gaps = 2/69 (2%)
Frame = +1
Query: 253 LIMDSDELGNDLVRLD-NGFLVADDTFVVNSDDVLEDE-NNSDSGSKSNAPLREQDRFLP 426
+ MD D D +L + + +V+ D ED N+ + + S REQD +LP
Sbjct: 1 MTMDGDSSTTDASQLGISADYIGGSHYVIQPHDDTEDSMNDHEDTNGSKESFREQDIYLP 60
Query: 427 IANIAKIMK 453
IAN+A+IMK
Sbjct: 61 IANVARIMK 69
>UniRef50_Q8ST61 Cluster: RH50436p; n=2; Sophophora|Rep: RH50436p -
Drosophila melanogaster (Fruit fly)
Length = 156
Score = 40.7 bits (91), Expect = 0.015
Identities = 21/35 (60%), Positives = 23/35 (65%), Gaps = 2/35 (5%)
Frame = +1
Query: 355 EDENNSDSGSKSNAP--LREQDRFLPIANIAKIMK 453
EDE + D K + LREQDRFLPI NI KIMK
Sbjct: 19 EDEASGDDSDKQDGGIMLREQDRFLPICNIIKIMK 53
>UniRef50_Q9FGJ3 Cluster: Nuclear transcription factor Y subunit
B-2; n=33; Eukaryota|Rep: Nuclear transcription factor Y
subunit B-2 - Arabidopsis thaliana (Mouse-ear cress)
Length = 190
Score = 39.9 bits (89), Expect = 0.025
Identities = 18/29 (62%), Positives = 24/29 (82%)
Frame = +1
Query: 367 NSDSGSKSNAPLREQDRFLPIANIAKIMK 453
N+ +G S +P REQDRFLPIAN+++IMK
Sbjct: 15 NNQNGQSSLSP-REQDRFLPIANVSRIMK 42
>UniRef50_Q7E0Y8 Cluster: CCAAT-binding protein; n=3; Oryza
sativa|Rep: CCAAT-binding protein - Oryza sativa subsp.
japonica (Rice)
Length = 189
Score = 39.5 bits (88), Expect = 0.034
Identities = 19/35 (54%), Positives = 26/35 (74%), Gaps = 1/35 (2%)
Frame = +1
Query: 352 LEDENNSDSGSKSNAP-LREQDRFLPIANIAKIMK 453
+ D + +SGS + +REQDRFLPIANI++IMK
Sbjct: 1 MADAGHDESGSPPRSGGVREQDRFLPIANISRIMK 35
>UniRef50_Q05KQ3 Cluster: Heading date 5; n=5; Oryza sativa|Rep:
Heading date 5 - Oryza sativa subsp. indica (Rice)
Length = 298
Score = 38.7 bits (86), Expect = 0.059
Identities = 15/25 (60%), Positives = 21/25 (84%)
Frame = +1
Query: 379 GSKSNAPLREQDRFLPIANIAKIMK 453
G ++P +EQDRFLPIAN+++IMK
Sbjct: 49 GGGGDSPAKEQDRFLPIANVSRIMK 73
>UniRef50_Q84W66 Cluster: Nuclear transcription factor Y subunit
B-6; n=9; core eudicotyledons|Rep: Nuclear transcription
factor Y subunit B-6 - Arabidopsis thaliana (Mouse-ear
cress)
Length = 234
Score = 38.3 bits (85), Expect = 0.077
Identities = 14/30 (46%), Positives = 22/30 (73%)
Frame = +1
Query: 364 NNSDSGSKSNAPLREQDRFLPIANIAKIMK 453
N + +G + +REQDRF+PIAN+ +IM+
Sbjct: 44 NKTSNGGEEECTVREQDRFMPIANVIRIMR 73
>UniRef50_Q67XJ2 Cluster: Nuclear transcription factor Y subunit
B-10; n=4; core eudicotyledons|Rep: Nuclear
transcription factor Y subunit B-10 - Arabidopsis
thaliana (Mouse-ear cress)
Length = 176
Score = 37.1 bits (82), Expect = 0.18
Identities = 18/31 (58%), Positives = 23/31 (74%)
Frame = +1
Query: 361 ENNSDSGSKSNAPLREQDRFLPIANIAKIMK 453
E+ D +S +REQDRFLPIANI++IMK
Sbjct: 15 ESGGDQSPRS-LNVREQDRFLPIANISRIMK 44
>UniRef50_Q8VYK4 Cluster: Nuclear transcription factor Y subunit
B-8; n=11; Eukaryota|Rep: Nuclear transcription factor Y
subunit B-8 - Arabidopsis thaliana (Mouse-ear cress)
Length = 173
Score = 37.1 bits (82), Expect = 0.18
Identities = 18/31 (58%), Positives = 23/31 (74%)
Frame = +1
Query: 361 ENNSDSGSKSNAPLREQDRFLPIANIAKIMK 453
E+ D +S +REQDRFLPIANI++IMK
Sbjct: 16 ESGGDQSPRS-LHVREQDRFLPIANISRIMK 45
>UniRef50_A7NW33 Cluster: Chromosome chr5 scaffold_2, whole genome
shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome
chr5 scaffold_2, whole genome shotgun sequence - Vitis
vinifera (Grape)
Length = 197
Score = 36.7 bits (81), Expect = 0.24
Identities = 15/31 (48%), Positives = 22/31 (70%)
Frame = +1
Query: 361 ENNSDSGSKSNAPLREQDRFLPIANIAKIMK 453
+N S S + ++EQDR LPIAN+++IMK
Sbjct: 3 DNPGASASTDDGSIKEQDRLLPIANVSRIMK 33
>UniRef50_P13434 Cluster: Transcriptional activator HAP3; n=3;
Saccharomycetaceae|Rep: Transcriptional activator HAP3 -
Saccharomyces cerevisiae (Baker's yeast)
Length = 144
Score = 36.7 bits (81), Expect = 0.24
Identities = 20/39 (51%), Positives = 27/39 (69%), Gaps = 2/39 (5%)
Frame = +1
Query: 343 DDVLEDENN-SDSGSKSN-APLREQDRFLPIANIAKIMK 453
+D E+ N S SGS + LREQDR+LPI N+A++MK
Sbjct: 14 EDTQENGGNASSSGSLQQISTLREQDRWLPINNVARLMK 52
>UniRef50_A7PL27 Cluster: Chromosome chr7 scaffold_20, whole genome
shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome
chr7 scaffold_20, whole genome shotgun sequence - Vitis
vinifera (Grape)
Length = 654
Score = 36.3 bits (80), Expect = 0.31
Identities = 18/31 (58%), Positives = 24/31 (77%), Gaps = 2/31 (6%)
Frame = +1
Query: 367 NSDSGSKSN--APLREQDRFLPIANIAKIMK 453
NS GS S+ + +EQDRFLPIAN+++IMK
Sbjct: 460 NSPVGSPSSDTSSSKEQDRFLPIANVSRIMK 490
>UniRef50_Q4H329 Cluster: Transcription factor protein; n=1; Ciona
intestinalis|Rep: Transcription factor protein - Ciona
intestinalis (Transparent sea squirt)
Length = 184
Score = 35.5 bits (78), Expect = 0.55
Identities = 18/53 (33%), Positives = 31/53 (58%)
Frame = +1
Query: 295 LDNGFLVADDTFVVNSDDVLEDENNSDSGSKSNAPLREQDRFLPIANIAKIMK 453
+DN AD + + ++ + ++ S+ + REQD +LPIAN+A+IMK
Sbjct: 1 MDNASFAADFLQLEDQEEEVAEQRPSN---EQKGQFREQDIYLPIANVARIMK 50
>UniRef50_Q22AL0 Cluster: Histone-like transcription factor
(CBF/NF-Y) and archaeal histone; n=3;
Oligohymenophorea|Rep: Histone-like transcription factor
(CBF/NF-Y) and archaeal histone - Tetrahymena
thermophila SB210
Length = 191
Score = 35.5 bits (78), Expect = 0.55
Identities = 15/35 (42%), Positives = 23/35 (65%)
Frame = +1
Query: 349 VLEDENNSDSGSKSNAPLREQDRFLPIANIAKIMK 453
+ + + + DSG + N + RFLPIANI++IMK
Sbjct: 33 ISKKQMDGDSGQQDNRQVPNYSRFLPIANISRIMK 67
>UniRef50_A7PTW4 Cluster: Chromosome chr7 scaffold_31, whole genome
shotgun sequence; n=2; Vitis vinifera|Rep: Chromosome
chr7 scaffold_31, whole genome shotgun sequence - Vitis
vinifera (Grape)
Length = 186
Score = 35.1 bits (77), Expect = 0.72
Identities = 19/47 (40%), Positives = 27/47 (57%), Gaps = 3/47 (6%)
Frame = +1
Query: 322 DTFVVNSDDVLEDENNSDSGSKSNAP---LREQDRFLPIANIAKIMK 453
D N+D + + N GS +A ++EQDR LPIAN+ +IMK
Sbjct: 14 DDIGTNADRDYDHKYNYAGGSSVSAEDGIIKEQDRLLPIANVGRIMK 60
>UniRef50_Q94EJ7 Cluster: Leafy cotyledon1; n=4; Poaceae|Rep: Leafy
cotyledon1 - Zea mays (Maize)
Length = 278
Score = 34.7 bits (76), Expect = 0.95
Identities = 15/31 (48%), Positives = 22/31 (70%), Gaps = 1/31 (3%)
Frame = +1
Query: 364 NNSDSGSKSNAP-LREQDRFLPIANIAKIMK 453
NN + + AP +REQDR +PIAN+ +IM+
Sbjct: 22 NNGGAAQQHAAPAIREQDRLMPIANVIRIMR 52
>UniRef50_Q6C4Q0 Cluster: Similarities with DEHA0C03817g
Debaryomyces hansenii; n=2; Ascomycota|Rep: Similarities
with DEHA0C03817g Debaryomyces hansenii - Yarrowia
lipolytica (Candida lipolytica)
Length = 1219
Score = 34.7 bits (76), Expect = 0.95
Identities = 17/52 (32%), Positives = 34/52 (65%)
Frame = +1
Query: 262 DSDELGNDLVRLDNGFLVADDTFVVNSDDVLEDENNSDSGSKSNAPLREQDR 417
D D +GN+ + F + DD V++D+ +DE+++D ++++APL E++R
Sbjct: 228 DDDGVGNN-----DMFKIDDDARSVSTDESSDDESDADRAARADAPLIERER 274
>UniRef50_Q9SIT9 Cluster: Nuclear transcription factor Y subunit
B-7; n=3; core eudicotyledons|Rep: Nuclear transcription
factor Y subunit B-7 - Arabidopsis thaliana (Mouse-ear
cress)
Length = 215
Score = 34.7 bits (76), Expect = 0.95
Identities = 15/28 (53%), Positives = 20/28 (71%)
Frame = +1
Query: 370 SDSGSKSNAPLREQDRFLPIANIAKIMK 453
S + +N +EQDRFLPIAN+ +IMK
Sbjct: 24 SSKTNNNNNNNKEQDRFLPIANVGRIMK 51
>UniRef50_Q76FX3 Cluster: CCAAT-box binding factor HAP3 homolog;
n=3; Daucus carota|Rep: CCAAT-box binding factor HAP3
homolog - Daucus carota (Carrot)
Length = 207
Score = 34.3 bits (75), Expect = 1.3
Identities = 14/31 (45%), Positives = 24/31 (77%)
Frame = +1
Query: 361 ENNSDSGSKSNAPLREQDRFLPIANIAKIMK 453
+NN +G + + +REQDRF+PIAN+ ++M+
Sbjct: 34 DNNPAAGDQ-DCLVREQDRFMPIANVIRLMR 63
>UniRef50_Q5KGK8 Cluster: Transcriptional activator, putative; n=2;
Filobasidiella neoformans|Rep: Transcriptional
activator, putative - Cryptococcus neoformans
(Filobasidiella neoformans)
Length = 155
Score = 34.3 bits (75), Expect = 1.3
Identities = 14/17 (82%), Positives = 17/17 (100%)
Frame = +1
Query: 403 REQDRFLPIANIAKIMK 453
REQDR+LPIAN+A+IMK
Sbjct: 41 REQDRWLPIANVARIMK 57
>UniRef50_A5DAN8 Cluster: Putative uncharacterized protein; n=2;
Saccharomycetaceae|Rep: Putative uncharacterized protein
- Pichia guilliermondii (Yeast) (Candida guilliermondii)
Length = 244
Score = 33.9 bits (74), Expect = 1.7
Identities = 13/18 (72%), Positives = 18/18 (100%)
Frame = +1
Query: 400 LREQDRFLPIANIAKIMK 453
LREQDR+LPIAN++++MK
Sbjct: 12 LREQDRWLPIANVSRLMK 29
>UniRef50_Q96WP0 Cluster: CCAAT-binding protein subunit HAP3; n=8;
Pezizomycotina|Rep: CCAAT-binding protein subunit HAP3 -
Trichoderma reesei (Hypocrea jecorina)
Length = 204
Score = 33.5 bits (73), Expect = 2.2
Identities = 13/18 (72%), Positives = 18/18 (100%)
Frame = +1
Query: 400 LREQDRFLPIANIAKIMK 453
++EQDR+LPIAN+A+IMK
Sbjct: 44 VKEQDRWLPIANVARIMK 61
>UniRef50_Q65XK1 Cluster: Nuclear transcription factor Y subunit
B-4; n=5; Oryza sativa|Rep: Nuclear transcription factor
Y subunit B-4 - Oryza sativa subsp. japonica (Rice)
Length = 143
Score = 33.5 bits (73), Expect = 2.2
Identities = 15/32 (46%), Positives = 19/32 (59%)
Frame = +1
Query: 358 DENNSDSGSKSNAPLREQDRFLPIANIAKIMK 453
D + G +EQDRFLPIANI +IM+
Sbjct: 6 DGTENGGGGGGGGVGKEQDRFLPIANIGRIMR 37
>UniRef50_Q84528 Cluster: A208R protein; n=1; Paramecium bursaria
Chlorella virus 1|Rep: A208R protein - Paramecium
bursaria Chlorella virus 1 (PBCV-1)
Length = 311
Score = 32.7 bits (71), Expect = 3.8
Identities = 15/40 (37%), Positives = 25/40 (62%)
Frame = +1
Query: 313 VADDTFVVNSDDVLEDENNSDSGSKSNAPLREQDRFLPIA 432
V+DD FV +SDD +D+++ DS S+ + + D + IA
Sbjct: 192 VSDDDFVEDSDDDSDDDSDDDSDDDSDDDINDNDFEIDIA 231
>UniRef50_Q461Z9 Cluster: Putative uncharacterized protein; n=1;
Trichoplusia ni SNPV|Rep: Putative uncharacterized
protein - Trichoplusia ni SNPV
Length = 97
Score = 32.7 bits (71), Expect = 3.8
Identities = 14/38 (36%), Positives = 23/38 (60%)
Frame = +1
Query: 280 NDLVRLDNGFLVADDTFVVNSDDVLEDENNSDSGSKSN 393
N+++ ++ L +D + N DD+L DENN SG+ N
Sbjct: 55 NEIMPSEDDLLSGEDDPLSNEDDLLSDENNPLSGNNDN 92
>UniRef50_O82248 Cluster: Nuclear transcription factor Y subunit
B-5; n=3; Magnoliophyta|Rep: Nuclear transcription
factor Y subunit B-5 - Arabidopsis thaliana (Mouse-ear
cress)
Length = 160
Score = 32.7 bits (71), Expect = 3.8
Identities = 13/27 (48%), Positives = 19/27 (70%)
Frame = +1
Query: 373 DSGSKSNAPLREQDRFLPIANIAKIMK 453
D + + ++EQDR LPIAN+ +IMK
Sbjct: 40 DQQQEESMMVKEQDRLLPIANVGRIMK 66
>UniRef50_Q91F97 Cluster: 428L; n=1; Invertebrate iridescent virus
6|Rep: 428L - Chilo iridescent virus (CIV) (Insect
iridescent virus type 6)
Length = 1193
Score = 32.3 bits (70), Expect = 5.1
Identities = 19/63 (30%), Positives = 30/63 (47%), Gaps = 4/63 (6%)
Frame = +1
Query: 244 LKFLIMDSDELGNDLVRL----DNGFLVADDTFVVNSDDVLEDENNSDSGSKSNAPLREQ 411
LKFLI D +EL L+++ +G + D ++ +D +EN + K EQ
Sbjct: 294 LKFLIGDEEELDKYLIKIVEETSDGGIFDDMEIEISQEDDFNEENEESTEKKKITQFIEQ 353
Query: 412 DRF 420
D F
Sbjct: 354 DMF 356
>UniRef50_Q92611 Cluster: ER degradation-enhancing
alpha-mannosidase-like 1; n=36; Eumetazoa|Rep: ER
degradation-enhancing alpha-mannosidase-like 1 - Homo
sapiens (Human)
Length = 657
Score = 32.3 bits (70), Expect = 5.1
Identities = 13/40 (32%), Positives = 23/40 (57%)
Frame = +3
Query: 54 YINVNVVSGEHINSFLDYLNAMIQRR*LLLSSLNTQFCKH 173
Y+NVN+ SG+ +N+++D L A +L+ + C H
Sbjct: 420 YVNVNMFSGQLMNTWIDSLQAFFPGLQVLIGDVEDAICLH 459
>UniRef50_UPI0000E487FF Cluster: PREDICTED: similar to Transcription
initiation factor IIF alpha subunit; n=3;
Strongylocentrotus purpuratus|Rep: PREDICTED: similar to
Transcription initiation factor IIF alpha subunit -
Strongylocentrotus purpuratus
Length = 490
Score = 31.9 bits (69), Expect = 6.7
Identities = 15/44 (34%), Positives = 27/44 (61%)
Frame = +1
Query: 265 SDELGNDLVRLDNGFLVADDTFVVNSDDVLEDENNSDSGSKSNA 396
S G+DLVRL + + +D + ++S + +ED ++ D G KS +
Sbjct: 163 SKSKGSDLVRLID--TITEDDYFLSSGEEIEDSDDEDGGGKSKS 204
>UniRef50_Q8I2Y8 Cluster: Putative uncharacterized protein PFI0805w;
n=1; Plasmodium falciparum 3D7|Rep: Putative
uncharacterized protein PFI0805w - Plasmodium falciparum
(isolate 3D7)
Length = 2506
Score = 31.9 bits (69), Expect = 6.7
Identities = 24/70 (34%), Positives = 36/70 (51%), Gaps = 9/70 (12%)
Frame = +3
Query: 42 CVNKYINVNVVSGEHINSFLDYL----NAMIQRR*LLLSSLNTQ-----FCKHYVTLSCK 194
C++K+I+VNVV E N L Y+ N M+ ++ L + NT+ F YV+L K
Sbjct: 1836 CIDKHISVNVVEQEKKNHILSYIYCKNNFMMNKKEKLFVNSNTKKSMFYFKNKYVSLIYK 1895
Query: 195 SSTHFFNKRE 224
H N R+
Sbjct: 1896 ---HLLNDRD 1902
>UniRef50_Q54Y18 Cluster: Bromodomain-containing protein; n=1;
Dictyostelium discoideum AX4|Rep: Bromodomain-containing
protein - Dictyostelium discoideum AX4
Length = 715
Score = 31.9 bits (69), Expect = 6.7
Identities = 18/45 (40%), Positives = 27/45 (60%)
Frame = +1
Query: 280 NDLVRLDNGFLVADDTFVVNSDDVLEDENNSDSGSKSNAPLREQD 414
N++V+LD + VV ++D ED+NN D GSK A L ++D
Sbjct: 616 NEIVKLDKTLNLVPKLVVVENND--EDDNNDDEGSK-KAVLVDED 657
>UniRef50_P38966 Cluster: Uncharacterized protein YDR089W; n=2;
Saccharomyces cerevisiae|Rep: Uncharacterized protein
YDR089W - Saccharomyces cerevisiae (Baker's yeast)
Length = 869
Score = 31.9 bits (69), Expect = 6.7
Identities = 16/49 (32%), Positives = 29/49 (59%), Gaps = 1/49 (2%)
Frame = +1
Query: 247 KFLIMDSDELGNDLVRLDNGFLVADDTFVVNSDDVLEDENNSDS-GSKS 390
+FL+ D G + L+ GF + DD+ + S ++L+ +N +S G+KS
Sbjct: 273 RFLLSSEDIEGLKFMLLNIGFRIIDDSIISTSKEILDTTDNINSAGNKS 321
>UniRef50_Q48IS0 Cluster: Putative uncharacterized protein; n=1;
Pseudomonas syringae pv. phaseolicola 1448A|Rep:
Putative uncharacterized protein - Pseudomonas syringae
pv. phaseolicola (strain 1448A / Race 6)
Length = 1164
Score = 31.5 bits (68), Expect = 8.9
Identities = 20/60 (33%), Positives = 31/60 (51%), Gaps = 3/60 (5%)
Frame = +1
Query: 268 DELGNDLVRLDNG---FLVADDTFVVNSDDVLEDENNSDSGSKSNAPLREQDRFLPIANI 438
DELG L+R +NG F+V+ D+ DDV+E N +G+ R + P+A +
Sbjct: 421 DELGAGLIRFENGDGKFIVSKDSSPQLYDDVVEKWNELGTGNIGET--RSRHNLPPVAEL 478
>UniRef50_Q5CGD1 Cluster: Aspartyl (Acid) protease; n=2;
Cryptosporidium|Rep: Aspartyl (Acid) protease -
Cryptosporidium hominis
Length = 794
Score = 31.5 bits (68), Expect = 8.9
Identities = 15/52 (28%), Positives = 28/52 (53%)
Frame = +1
Query: 298 DNGFLVADDTFVVNSDDVLEDENNSDSGSKSNAPLREQDRFLPIANIAKIMK 453
D FLV +F +N D +++ +N+ S KSN P R + +++++K
Sbjct: 533 DKSFLVLGASFFINKDVIIDVKNSRASFVKSNCPQIAHARRTSTSEMSQLLK 584
>UniRef50_Q54RC1 Cluster: Putative asparaginase 2; n=1;
Dictyostelium discoideum AX4|Rep: Putative asparaginase
2 - Dictyostelium discoideum AX4
Length = 589
Score = 31.5 bits (68), Expect = 8.9
Identities = 17/48 (35%), Positives = 33/48 (68%), Gaps = 1/48 (2%)
Frame = +1
Query: 253 LIMDSDELGNDLVRLDNGFLVADDTFVVNS-DDVLEDENNSDSGSKSN 393
+I +S+++ N+L++L N F+ D T++V + LED+ ++SG+ SN
Sbjct: 117 VIDNSNDIENELIKLKNNFI--DSTWIVETVITFLEDDPLTNSGTGSN 162
>UniRef50_A5K5C2 Cluster: CCAAT-box DNA binding protein subunit B,
putative; n=1; Plasmodium vivax|Rep: CCAAT-box DNA
binding protein subunit B, putative - Plasmodium vivax
Length = 1058
Score = 31.5 bits (68), Expect = 8.9
Identities = 22/60 (36%), Positives = 29/60 (48%), Gaps = 2/60 (3%)
Frame = +1
Query: 280 NDLVRLDNGFLVADDTFVVNSDDVLE--DENNSDSGSKSNAPLREQDRFLPIANIAKIMK 453
N+ +DN D +SDD LE D N D K + + LPIANI++IMK
Sbjct: 868 NEYADVDNENNNLSDDGKNSSDDNLEKKDSNQFDVNDKKKTKA-DSETLLPIANISRIMK 926
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 386,769,909
Number of Sequences: 1657284
Number of extensions: 7001190
Number of successful extensions: 18573
Number of sequences better than 10.0: 38
Number of HSP's better than 10.0 without gapping: 17574
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18489
length of database: 575,637,011
effective HSP length: 94
effective length of database: 419,852,315
effective search space used: 23931581955
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -