Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NRPG0011
         (684 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_P04142 Cluster: Cecropin-B precursor; n=16; Obtectomera...    79   1e-13
UniRef50_P01507 Cluster: Cecropin-A precursor; n=17; Ditrysia|Re...    77   3e-13
UniRef50_A6BMG0 Cluster: Cecropin A; n=1; Plutella xylostella|Re...    60   5e-08
UniRef50_P01511 Cluster: Cecropin-D; n=6; Obtectomera|Rep: Cecro...    47   5e-04
UniRef50_Q2WGL2 Cluster: Antibacterial peptide; n=4; Obtectomera...    44   0.003
UniRef50_P48821 Cluster: Antibacterial peptide enbocin precursor...    37   0.53 
UniRef50_Q8MUF4 Cluster: Cecropin-B precursor; n=18; Culicidae|R...    35   1.6  
UniRef50_O54222 Cluster: EciB protein; n=2; Staphylococcus epide...    35   2.1  
UniRef50_Q7RBQ6 Cluster: Putative uncharacterized protein PY0608...    34   2.8  
UniRef50_Q8IE27 Cluster: Putative uncharacterized protein MAL13P...    33   4.9  
UniRef50_UPI00015A3FAD Cluster: UPI00015A3FAD related cluster; n...    33   6.5  
UniRef50_Q660B0 Cluster: Putative uncharacterized protein; n=3; ...    33   6.5  
UniRef50_Q5W8G6 Cluster: Cecropin; n=1; Acalolepta luxuriosa|Rep...    33   6.5  
UniRef50_A3LWB9 Cluster: DNA-directed RNA polymerase; n=1; Pichi...    33   6.5  
UniRef50_UPI00006CF26D Cluster: hypothetical protein TTHERM_0005...    33   8.6  
UniRef50_Q9EMY9 Cluster: AMV060; n=2; Betaentomopoxvirus|Rep: AM...    33   8.6  
UniRef50_Q8EQJ8 Cluster: Hypothetical conserved protein; n=1; Oc...    33   8.6  
UniRef50_Q7RQ18 Cluster: Putative uncharacterized protein PY0128...    33   8.6  

>UniRef50_P04142 Cluster: Cecropin-B precursor; n=16;
           Obtectomera|Rep: Cecropin-B precursor - Bombyx mori
           (Silk moth)
          Length = 63

 Score = 78.6 bits (185), Expect = 1e-13
 Identities = 34/63 (53%), Positives = 43/63 (68%)
 Frame = +2

Query: 65  MNFVRIXXXXXXXXXXXXXXXXXPEPRWKLFKKIEKVGRNVRDGLIKAGPAIAVIGQAKS 244
           MNF +I                 PEPRWK+FKKIEK+GRN+RDG++KAGPAI V+G AK+
Sbjct: 1   MNFAKILSFVFALVLALSMTSAAPEPRWKIFKKIEKMGRNIRDGIVKAGPAIEVLGSAKA 60

Query: 245 LGK 253
           +GK
Sbjct: 61  IGK 63


>UniRef50_P01507 Cluster: Cecropin-A precursor; n=17; Ditrysia|Rep:
           Cecropin-A precursor - Hyalophora cecropia (Cecropia
           moth)
          Length = 64

 Score = 77.4 bits (182), Expect = 3e-13
 Identities = 35/63 (55%), Positives = 42/63 (66%)
 Frame = +2

Query: 65  MNFVRIXXXXXXXXXXXXXXXXXPEPRWKLFKKIEKVGRNVRDGLIKAGPAIAVIGQAKS 244
           MNF RI                 PEP+WKLFKKIEKVG+N+RDG+IKAGPA+AV+GQA  
Sbjct: 1   MNFSRIFFFVFACLTALAMVNAAPEPKWKLFKKIEKVGQNIRDGIIKAGPAVAVVGQATQ 60

Query: 245 LGK 253
           + K
Sbjct: 61  IAK 63


>UniRef50_A6BMG0 Cluster: Cecropin A; n=1; Plutella xylostella|Rep:
           Cecropin A - Plutella xylostella (Diamondback moth)
          Length = 66

 Score = 60.1 bits (139), Expect = 5e-08
 Identities = 27/41 (65%), Positives = 35/41 (85%), Gaps = 1/41 (2%)
 Frame = +2

Query: 140 PRWKLFKKIEKVGRNVRDGLIK-AGPAIAVIGQAKSLGK*T 259
           PRWK FKK+EKVGRN+R+G+I+  GPA+AVIGQA S+ + T
Sbjct: 24  PRWKPFKKLEKVGRNIRNGIIRYNGPAVAVIGQATSIARPT 64


>UniRef50_P01511 Cluster: Cecropin-D; n=6; Obtectomera|Rep:
           Cecropin-D - Antheraea pernyi (Chinese oak silk moth)
          Length = 36

 Score = 46.8 bits (106), Expect = 5e-04
 Identities = 18/36 (50%), Positives = 26/36 (72%)
 Frame = +2

Query: 146 WKLFKKIEKVGRNVRDGLIKAGPAIAVIGQAKSLGK 253
           W  FK++E+ G+ VRD +I AGPA+A + QA +L K
Sbjct: 1   WNPFKELERAGQRVRDAIISAGPAVATVAQATALAK 36


>UniRef50_Q2WGL2 Cluster: Antibacterial peptide; n=4;
           Obtectomera|Rep: Antibacterial peptide - Bombyx mori
           (Silk moth)
          Length = 66

 Score = 44.4 bits (100), Expect = 0.003
 Identities = 19/34 (55%), Positives = 25/34 (73%)
 Frame = +2

Query: 146 WKLFKKIEKVGRNVRDGLIKAGPAIAVIGQAKSL 247
           W  FK++E VG+ VRD +I AGPAI V+ +AK L
Sbjct: 23  WDFFKELEGVGQRVRDSIISAGPAIDVLQKAKGL 56


>UniRef50_P48821 Cluster: Antibacterial peptide enbocin precursor;
           n=5; Ditrysia|Rep: Antibacterial peptide enbocin
           precursor - Bombyx mori (Silk moth)
          Length = 59

 Score = 36.7 bits (81), Expect = 0.53
 Identities = 14/34 (41%), Positives = 21/34 (61%)
 Frame = +2

Query: 146 WKLFKKIEKVGRNVRDGLIKAGPAIAVIGQAKSL 247
           W +FK+IE+     RD +I AGPA+  +  A S+
Sbjct: 23  WNIFKEIERAVARTRDAVISAGPAVRTVAAATSV 56


>UniRef50_Q8MUF4 Cluster: Cecropin-B precursor; n=18; Culicidae|Rep:
           Cecropin-B precursor - Anopheles gambiae (African
           malaria mosquito)
          Length = 60

 Score = 35.1 bits (77), Expect = 1.6
 Identities = 16/28 (57%), Positives = 19/28 (67%)
 Frame = +2

Query: 140 PRWKLFKKIEKVGRNVRDGLIKAGPAIA 223
           PRWK  K++EK+GRNV     KA P IA
Sbjct: 27  PRWKFGKRLEKLGRNVFRAAKKALPVIA 54


>UniRef50_O54222 Cluster: EciB protein; n=2; Staphylococcus
           epidermidis|Rep: EciB protein - Staphylococcus
           epidermidis
          Length = 976

 Score = 34.7 bits (76), Expect = 2.1
 Identities = 18/56 (32%), Positives = 29/56 (51%)
 Frame = -2

Query: 638 KKNENLNFLNIHSNKTYNVKLKDELYKNI*FICLRFIIYYHNILKLHYIASLKYIS 471
           KKNE+LN + + SN   N K+K+ ++     IC    IY  N   ++    + YI+
Sbjct: 664 KKNEHLNIIEVESNLLNNKKIKEVVFSAKSDICQSINIYEENKNNINLPKEILYIT 719


>UniRef50_Q7RBQ6 Cluster: Putative uncharacterized protein PY06083;
           n=3; Plasmodium (Vinckeia)|Rep: Putative uncharacterized
           protein PY06083 - Plasmodium yoelii yoelii
          Length = 1402

 Score = 34.3 bits (75), Expect = 2.8
 Identities = 24/76 (31%), Positives = 42/76 (55%), Gaps = 1/76 (1%)
 Frame = -2

Query: 656 VQVYAKKKNENLNFLNIHSNKTYNV-KLKDELYKNI*FICLRFIIYYHNILKLHYIASLK 480
           ++++AKKK +N+ FL   S   Y + KL     KNI      + +YY +IL  +YI ++K
Sbjct: 63  LKIFAKKKYKNIIFLQCASEYFYWLCKLNKGNKKNI-----SYYLYYCSIL--NYIPTIK 115

Query: 479 YISAHVYLITLMKAMT 432
           YI  ++ +     ++T
Sbjct: 116 YIEEYIKIFDYFISLT 131


>UniRef50_Q8IE27 Cluster: Putative uncharacterized protein
           MAL13P1.158; n=1; Plasmodium falciparum 3D7|Rep:
           Putative uncharacterized protein MAL13P1.158 -
           Plasmodium falciparum (isolate 3D7)
          Length = 687

 Score = 33.5 bits (73), Expect = 4.9
 Identities = 25/72 (34%), Positives = 39/72 (54%), Gaps = 2/72 (2%)
 Frame = -2

Query: 650 VYAKKKNENLNFLNIHSNKTYNVKLKDELYKN-I*FICLRFIIYYHNILKLHYIASLKY- 477
           V  K  N++ NFLN   N+T+   +K  L+ N +  + L  +IYY+NI K+    SL Y 
Sbjct: 76  VLFKNLNKSCNFLNEKWNETFMNCIKKSLFYNPLNIMTLFNLIYYYNI-KMDVKNSLFYS 134

Query: 476 ISAHVYLITLMK 441
              H+ L+ + K
Sbjct: 135 YLLHIILMKIWK 146


>UniRef50_UPI00015A3FAD Cluster: UPI00015A3FAD related cluster; n=1;
           Danio rerio|Rep: UPI00015A3FAD UniRef100 entry - Danio
           rerio
          Length = 1200

 Score = 33.1 bits (72), Expect = 6.5
 Identities = 21/67 (31%), Positives = 37/67 (55%), Gaps = 1/67 (1%)
 Frame = -2

Query: 623 LNFLNIHSNKTYNVKLKDELYKNI*FICLRFIIYYHNILKLHYIASL-KYISAHVYLITL 447
           +N + I + K  N  ++ ++  NI F+C+ F I+ H I   HYI  + K IS H  L+ L
Sbjct: 565 VNPIEIATTKAGNPSIETQVGMNI-FLCIIF-IFIHYINLQHYIIPIRKQISVHTVLLFL 622

Query: 446 MKAMTVV 426
           +  ++ +
Sbjct: 623 LSNISQI 629


>UniRef50_Q660B0 Cluster: Putative uncharacterized protein; n=3;
           Borrelia burgdorferi group|Rep: Putative uncharacterized
           protein - Borrelia garinii
          Length = 348

 Score = 33.1 bits (72), Expect = 6.5
 Identities = 13/31 (41%), Positives = 22/31 (70%), Gaps = 1/31 (3%)
 Frame = -2

Query: 641 KKKNENLNFLN-IHSNKTYNVKLKDELYKNI 552
           KK  +N+N++N ++  K YN+ +K+E  KNI
Sbjct: 103 KKIEKNINYINSVYYKKEYNINIKNEFIKNI 133


>UniRef50_Q5W8G6 Cluster: Cecropin; n=1; Acalolepta luxuriosa|Rep:
           Cecropin - Acalolepta luxuriosa (Udo longicorn beetle)
          Length = 60

 Score = 33.1 bits (72), Expect = 6.5
 Identities = 15/34 (44%), Positives = 23/34 (67%), Gaps = 1/34 (2%)
 Frame = +2

Query: 155 FKKIEKVGRNVRDGLIKAGP-AIAVIGQAKSLGK 253
           FK+IEKVG+N+R+   ++ P  +   G AK +GK
Sbjct: 27  FKRIEKVGKNIRNAAERSLPTVVGYAGVAKQIGK 60


>UniRef50_A3LWB9 Cluster: DNA-directed RNA polymerase; n=1; Pichia
           stipitis|Rep: DNA-directed RNA polymerase - Pichia
           stipitis (Yeast)
          Length = 1202

 Score = 33.1 bits (72), Expect = 6.5
 Identities = 14/26 (53%), Positives = 17/26 (65%)
 Frame = -1

Query: 324 LEIHNYLQSCFKLNASLEFNDKVYFP 247
           L IH+YL   FK+  SL FN  +YFP
Sbjct: 455 LRIHSYLYQQFKIYDSLAFNKSLYFP 480


>UniRef50_UPI00006CF26D Cluster: hypothetical protein
           TTHERM_00058280; n=1; Tetrahymena thermophila SB210|Rep:
           hypothetical protein TTHERM_00058280 - Tetrahymena
           thermophila SB210
          Length = 1063

 Score = 32.7 bits (71), Expect = 8.6
 Identities = 16/39 (41%), Positives = 24/39 (61%), Gaps = 2/39 (5%)
 Frame = -2

Query: 665 ED*VQVYAKKKNE--NLNFLNIHSNKTYNVKLKDELYKN 555
           ED  Q ++K+KNE   LN LN+  N+  ++   D +YKN
Sbjct: 537 EDPKQQFSKQKNELQELNDLNLSPNQAKSINQSDSIYKN 575


>UniRef50_Q9EMY9 Cluster: AMV060; n=2; Betaentomopoxvirus|Rep:
           AMV060 - Amsacta moorei entomopoxvirus (AmEPV)
          Length = 295

 Score = 32.7 bits (71), Expect = 8.6
 Identities = 16/38 (42%), Positives = 24/38 (63%)
 Frame = -2

Query: 668 TED*VQVYAKKKNENLNFLNIHSNKTYNVKLKDELYKN 555
           TED V+++   KNEN+N L I S K Y++ L   +Y +
Sbjct: 48  TED-VELHKNYKNENINILYIGSGKGYHIPLLINMYSD 84


>UniRef50_Q8EQJ8 Cluster: Hypothetical conserved protein; n=1;
            Oceanobacillus iheyensis|Rep: Hypothetical conserved
            protein - Oceanobacillus iheyensis
          Length = 1210

 Score = 32.7 bits (71), Expect = 8.6
 Identities = 13/47 (27%), Positives = 27/47 (57%)
 Frame = -2

Query: 635  KNENLNFLNIHSNKTYNVKLKDELYKNI*FICLRFIIYYHNILKLHY 495
            KNE + +++   + +Y  ++K +L K   ++  RF I +H++ K  Y
Sbjct: 963  KNETIQYVSTFKDDSYITRMKQKLEKQTFYVAQRFGIRFHDLFKEIY 1009


>UniRef50_Q7RQ18 Cluster: Putative uncharacterized protein PY01285;
           n=1; Plasmodium yoelii yoelii|Rep: Putative
           uncharacterized protein PY01285 - Plasmodium yoelii
           yoelii
          Length = 369

 Score = 32.7 bits (71), Expect = 8.6
 Identities = 18/42 (42%), Positives = 27/42 (64%), Gaps = 2/42 (4%)
 Frame = -2

Query: 626 NLNFLNIHSNKT-YNVKLKDELYKNI*FICLRFI-IYYHNIL 507
           N + ++I SNKT  N+K+ + L+K I F C R   IY H+I+
Sbjct: 96  NYDIISILSNKTDNNLKISENLFKTIKFDCSRLSNIYSHSII 137


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 554,388,237
Number of Sequences: 1657284
Number of extensions: 9513507
Number of successful extensions: 26369
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 25174
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 26357
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 53305790091
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)