Samia BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0001_A03
         (485 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_UPI000051AD28 Cluster: PREDICTED: similar to CG4080-PA,...    35   1.1  
UniRef50_Q47TW1 Cluster: Similar to Uncharacterized conserved pr...    34   1.5  
UniRef50_Q5FNA7 Cluster: Transport ATP-binding protein CydD; n=3...    33   4.5  
UniRef50_Q9PEW9 Cluster: Ubiquinol cytochrome C oxidoreductase, ...    32   6.0  
UniRef50_Q6SL28 Cluster: NADH-ubiquinone oxidoreductase chain 4;...    32   6.0  
UniRef50_UPI0000DB797F Cluster: PREDICTED: similar to CG4840-PA;...    32   7.9  
UniRef50_A4A4V8 Cluster: Membrane protein; n=1; Congregibacter l...    32   7.9  

>UniRef50_UPI000051AD28 Cluster: PREDICTED: similar to CG4080-PA,
           partial; n=1; Apis mellifera|Rep: PREDICTED: similar to
           CG4080-PA, partial - Apis mellifera
          Length = 249

 Score = 34.7 bits (76), Expect = 1.1
 Identities = 17/73 (23%), Positives = 38/73 (52%)
 Frame = -2

Query: 310 RLNYYMSIIDYYHLLIFFIQLMVDSLGIMLMSPLAVLAAWLSGRTLAGLMAQDNHVTPWP 131
           R N + SI  +++ +I   Q+++D L +++ +PLA+ + ++    L  L+       PW 
Sbjct: 167 RYNIFRSIAIWFNSVIVTRQMLLDILYLVVTTPLALFSCYICILALRMLIKNGLQEMPWM 226

Query: 130 LASTFVLACMTLV 92
           + +      +TL+
Sbjct: 227 IVAMLPTCSLTLI 239


>UniRef50_Q47TW1 Cluster: Similar to Uncharacterized conserved
           protein; n=3; Actinomycetales|Rep: Similar to
           Uncharacterized conserved protein - Thermobifida fusca
           (strain YX)
          Length = 760

 Score = 34.3 bits (75), Expect = 1.5
 Identities = 14/41 (34%), Positives = 23/41 (56%)
 Frame = +1

Query: 334 LQIDHILLSFFMFHGYSTRHINTAIFVGFVLPVSRLSIWNR 456
           L+I H+     +++GY  +H+N      F+ P S+L I NR
Sbjct: 423 LEIHHVFPKPLLYNGYDRKHVNAIANFCFLTPQSKLEIGNR 463


>UniRef50_Q5FNA7 Cluster: Transport ATP-binding protein CydD; n=3;
           Acetobacteraceae|Rep: Transport ATP-binding protein CydD
           - Gluconobacter oxydans (Gluconobacter suboxydans)
          Length = 561

 Score = 32.7 bits (71), Expect = 4.5
 Identities = 17/45 (37%), Positives = 25/45 (55%)
 Frame = -2

Query: 226 MLMSPLAVLAAWLSGRTLAGLMAQDNHVTPWPLASTFVLACMTLV 92
           +L + L +L AW   RTLA ++ +D   T  P    F+LAC+  V
Sbjct: 31  LLSTLLGLLQAWALARTLASVLTRDTDST-GPAIGVFLLACVLRV 74


>UniRef50_Q9PEW9 Cluster: Ubiquinol cytochrome C oxidoreductase,
           cytochrome B subunit; n=20; cellular organisms|Rep:
           Ubiquinol cytochrome C oxidoreductase, cytochrome B
           subunit - Xylella fastidiosa
          Length = 420

 Score = 32.3 bits (70), Expect = 6.0
 Identities = 12/23 (52%), Positives = 17/23 (73%)
 Frame = +1

Query: 409 FVGFVLPVSRLSIWNRKVVLSYF 477
           FVG+VLP  ++S W  KV++S F
Sbjct: 144 FVGYVLPWGQVSFWGAKVIISLF 166


>UniRef50_Q6SL28 Cluster: NADH-ubiquinone oxidoreductase chain 4;
           n=1; Argulus americanus|Rep: NADH-ubiquinone
           oxidoreductase chain 4 - Argulus americanus
          Length = 425

 Score = 32.3 bits (70), Expect = 6.0
 Identities = 15/50 (30%), Positives = 29/50 (58%), Gaps = 3/50 (6%)
 Frame = -2

Query: 325 GTGIWRLNYYMSIIDYYHLLIFFIQLM---VDSLGIMLMSPLAVLAAWLS 185
           G G+WR+N  +++ +Y+ +L+F   +M   +  L  ++ S L  L A+ S
Sbjct: 216 GYGLWRINVILNLNEYWMMLLFIFLMMGSIIICLECLMQSDLKTLIAYSS 265


>UniRef50_UPI0000DB797F Cluster: PREDICTED: similar to CG4840-PA;
           n=1; Apis mellifera|Rep: PREDICTED: similar to CG4840-PA
           - Apis mellifera
          Length = 702

 Score = 31.9 bits (69), Expect = 7.9
 Identities = 18/76 (23%), Positives = 37/76 (48%)
 Frame = +1

Query: 181 VRKAMQQEQPVVTLTLYRDYQPLTE*KILKDDSNQLLTYSS*GAKFQFLDYLQIDHILLS 360
           ++K +Q+E  V + +L  D +P     ILK  S++ +T      +   +++  + H+L+ 
Sbjct: 586 MKKTLQRELRVPSSSLDSDAEPSAA--ILKPSSSKTVTARHNNTRDDDVNFKYLKHVLIK 643

Query: 361 FFMFHGYSTRHINTAI 408
           F     Y   H+  A+
Sbjct: 644 FLTSREYEALHLTRAV 659


>UniRef50_A4A4V8 Cluster: Membrane protein; n=1; Congregibacter
           litoralis KT71|Rep: Membrane protein - Congregibacter
           litoralis KT71
          Length = 155

 Score = 31.9 bits (69), Expect = 7.9
 Identities = 21/66 (31%), Positives = 32/66 (48%), Gaps = 4/66 (6%)
 Frame = -2

Query: 283 DYYHLLIFFIQLMVDSLGIML----MSPLAVLAAWLSGRTLAGLMAQDNHVTPWPLASTF 116
           DY  L IF ++  V++ G+ +    M  L V  AW+S  T  GLM  D   T   +++  
Sbjct: 55  DYAALAIFEVRTAVNAAGVFVALNVMFALFVAIAWISAFTAVGLMVIDISATATSVSALT 114

Query: 115 VLACMT 98
           + A  T
Sbjct: 115 LCASAT 120


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 465,931,503
Number of Sequences: 1657284
Number of extensions: 8982270
Number of successful extensions: 22370
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 21845
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 22370
length of database: 575,637,011
effective HSP length: 94
effective length of database: 419,852,315
effective search space used: 28130105105
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)