Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= FWDP01_FL5_A02
(857 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P09180 Cluster: 60S ribosomal protein L4; n=96; Eukaryo... 254 2e-66
UniRef50_P36578 Cluster: 60S ribosomal protein L4; n=70; Eukaryo... 254 3e-66
UniRef50_A7E7X3 Cluster: 60S ribosomal protein L4; n=2; Scleroti... 190 4e-47
UniRef50_Q3SEA6 Cluster: Ribosomal protein L4, putative; n=2; Ol... 188 2e-46
UniRef50_Q4XUM2 Cluster: 60S ribosomal subunit protein L4/L1, pu... 184 2e-45
UniRef50_Q4FXU6 Cluster: Ribosomal protein L1a, putative; n=1; L... 184 3e-45
UniRef50_Q1KYM6 Cluster: RPL4; n=1; Streblomastix strix|Rep: RPL... 177 2e-43
UniRef50_A3FPV6 Cluster: 60S ribosomal protein-like, putative; n... 175 1e-42
UniRef50_A7AUF0 Cluster: Ribosomal protein RPL4A; n=1; Babesia b... 172 8e-42
UniRef50_Q4UES5 Cluster: 60S ribosomal subunit protein L4/L1, pu... 167 4e-40
UniRef50_UPI0000499FAF Cluster: 60S ribosomal protein L4; n=5; E... 166 7e-40
UniRef50_Q4U6T4 Cluster: SL3; n=1; Brugia malayi|Rep: SL3 - Brug... 163 4e-39
UniRef50_A2E1Z6 Cluster: Ribosomal protein, putative; n=3; Trich... 161 3e-38
UniRef50_Q0U8Q3 Cluster: Putative uncharacterized protein; n=1; ... 156 8e-37
UniRef50_Q8SRC2 Cluster: 60S RIBOSOMAL PROTEIN L4; n=1; Encephal... 152 1e-35
UniRef50_Q98S44 Cluster: 60s ribosomal protein L1; n=2; Cryptomo... 143 4e-33
UniRef50_Q7R0P2 Cluster: GLP_79_45017_44067; n=1; Giardia lambli... 120 5e-26
UniRef50_Q5MGK5 Cluster: Ribosomal protein 23; n=2; Endopterygot... 117 4e-25
UniRef50_Q8TY91 Cluster: 50S ribosomal protein L4P; n=13; Euryar... 105 1e-21
UniRef50_Q8ZW51 Cluster: 50S ribosomal protein L4P; n=9; Archaea... 91 2e-17
UniRef50_Q00UB0 Cluster: Ribosomal protein RPL1/RPL2/RL4L4; n=1;... 90 8e-17
UniRef50_Q3LWC7 Cluster: Ribosomal protein L4A; n=1; Bigelowiell... 86 9e-16
UniRef50_Q2NFV7 Cluster: 50S ribosomal protein L4P; n=2; Euryarc... 84 4e-15
UniRef50_O28355 Cluster: 50S ribosomal protein L4P; n=9; Euryarc... 75 2e-12
UniRef50_Q9UXA6 Cluster: 50S ribosomal protein L4P; n=3; Archaea... 75 2e-12
UniRef50_UPI00005A2ACC Cluster: PREDICTED: similar to ribosomal ... 75 3e-12
UniRef50_A0RVX5 Cluster: Ribosomal protein L4; n=2; Thermoprotei... 70 9e-11
UniRef50_UPI00005A24EF Cluster: PREDICTED: similar to ribosomal ... 67 6e-10
UniRef50_A7R5H8 Cluster: Chromosome undetermined scaffold_974, w... 64 6e-09
UniRef50_Q9HIR0 Cluster: 50S ribosomal protein L4P; n=4; Thermop... 62 2e-08
UniRef50_Q9YFM1 Cluster: 50S ribosomal protein L4P; n=8; Archaea... 56 9e-07
UniRef50_Q4FXU7 Cluster: Putative uncharacterized protein; n=2; ... 56 1e-06
UniRef50_P12735 Cluster: 50S ribosomal protein L4P; n=1; Haloarc... 54 3e-06
UniRef50_P60847 Cluster: 50S ribosomal protein L4P; n=1; Nanoarc... 53 8e-06
UniRef50_Q95YH2 Cluster: Ribosomal protein L4; n=1; Paramecium c... 50 1e-04
UniRef50_A7QKL2 Cluster: Chromosome chr2 scaffold_113, whole gen... 42 0.020
UniRef50_Q673S8 Cluster: Ribosomal protein L4; n=3; cellular org... 38 0.25
UniRef50_A7Q400 Cluster: Chromosome chr13 scaffold_48, whole gen... 38 0.32
UniRef50_Q9UFE2 Cluster: Putative uncharacterized protein DKFZp4... 37 0.57
UniRef50_UPI00015B4B32 Cluster: PREDICTED: hypothetical protein;... 36 1.7
UniRef50_Q5NB71 Cluster: Putative uncharacterized protein P0431F... 36 1.7
UniRef50_Q2S0X7 Cluster: Sensor protein; n=1; Salinibacter ruber... 35 2.3
UniRef50_A6NR78 Cluster: Putative uncharacterized protein; n=1; ... 35 3.0
UniRef50_A4QZ10 Cluster: Predicted protein; n=2; Magnaporthe gri... 34 4.0
UniRef50_UPI000058888F Cluster: PREDICTED: similar to ENSANGP000... 34 5.3
UniRef50_A3C3B6 Cluster: Putative uncharacterized protein; n=3; ... 34 5.3
UniRef50_Q6PEV8 Cluster: Uncharacterized protein CXorf39; n=19; ... 34 5.3
UniRef50_Q52PH1 Cluster: Golden2-like transcription factor; n=8;... 33 7.0
UniRef50_UPI0000F212F9 Cluster: PREDICTED: hypothetical protein;... 33 9.2
UniRef50_A7SGS6 Cluster: Predicted protein; n=1; Nematostella ve... 33 9.2
UniRef50_A2DPP4 Cluster: Phosphatidylinositol 3-and 4-kinase fam... 33 9.2
UniRef50_P04196 Cluster: Histidine-rich glycoprotein precursor; ... 33 9.2
>UniRef50_P09180 Cluster: 60S ribosomal protein L4; n=96;
Eukaryota|Rep: 60S ribosomal protein L4 - Drosophila
melanogaster (Fruit fly)
Length = 401
Score = 254 bits (623), Expect = 2e-66
Identities = 120/206 (58%), Positives = 143/206 (69%)
Frame = +2
Query: 182 VFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAGHQTSAESWGTGRAVARIPRVRGGGTHR 361
VFKAPIRPD+VN+VH + +N+RQ Y VS+ AGHQTSAESWGTGRAVARIPRVRGGGTHR
Sbjct: 30 VFKAPIRPDVVNEVHQLLRRNNRQAYAVSELAGHQTSAESWGTGRAVARIPRVRGGGTHR 89
Query: 362 SGQGAFGNMCRGGRMFAPTKPWRRWHXXXXXXXXXXXXXXXXXXXXXXXXXQARGHIIEK 541
SGQGAFGNMCRGGRMFAPTK +RRWH Q++GH+I+
Sbjct: 90 SGQGAFGNMCRGGRMFAPTKTFRRWHRKVNVNQRRYALVSAIAASGVPALVQSKGHVIDG 149
Query: 542 IPELPLVVADKVQEINKTKQAVIFLRRLKAWSDILKVYKSQXXXXXXXXXXXXXXXXXXX 721
+ E PLVV+D+VQ++ KTKQAVIFLRRLK W+DI KVYKSQ
Sbjct: 150 VSEFPLVVSDEVQKVQKTKQAVIFLRRLKIWADIQKVYKSQRFRAGRGTMRDRRRIARRG 209
Query: 722 PLIIXXXDQGLTRAFRNIPGVXXLNV 799
PL++ D+GL +AFRNIPG+ +NV
Sbjct: 210 PLVVYDKDEGLRKAFRNIPGIETINV 235
>UniRef50_P36578 Cluster: 60S ribosomal protein L4; n=70;
Eukaryota|Rep: 60S ribosomal protein L4 - Homo sapiens
(Human)
Length = 427
Score = 254 bits (621), Expect = 3e-66
Identities = 121/206 (58%), Positives = 139/206 (67%)
Frame = +2
Query: 182 VFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAGHQTSAESWGTGRAVARIPRVRGGGTHR 361
VFKAPIRPD+VN VH ++ KN+RQPY VS+ AGHQTSAESWGTGRAVARIPRVRGGGTHR
Sbjct: 27 VFKAPIRPDIVNFVHTNLRKNNRQPYAVSELAGHQTSAESWGTGRAVARIPRVRGGGTHR 86
Query: 362 SGQGAFGNMCRGGRMFAPTKPWRRWHXXXXXXXXXXXXXXXXXXXXXXXXXQARGHIIEK 541
SGQGAFGNMCRGGRMFAPTK WRRWH ++GH IE+
Sbjct: 87 SGQGAFGNMCRGGRMFAPTKTWRRWHRRVNTTQKRYAICSALAASALPALVMSKGHRIEE 146
Query: 542 IPELPLVVADKVQEINKTKQAVIFLRRLKAWSDILKVYKSQXXXXXXXXXXXXXXXXXXX 721
+PELPLVV DKV+ KTK+AV+ L++LKAW+DI KVY SQ
Sbjct: 147 VPELPLVVEDKVEGYKKTKEAVLLLKKLKAWNDIKKVYASQRMRAGKGKMRNRRRIQRRG 206
Query: 722 PLIIXXXDQGLTRAFRNIPGVXXLNV 799
P II D G+ +AFRNIPG+ LNV
Sbjct: 207 PCIIYNEDNGIIKAFRNIPGITLLNV 232
>UniRef50_A7E7X3 Cluster: 60S ribosomal protein L4; n=2;
Sclerotiniaceae|Rep: 60S ribosomal protein L4 -
Sclerotinia sclerotiorum 1980
Length = 373
Score = 190 bits (463), Expect = 4e-47
Identities = 101/214 (47%), Positives = 123/214 (57%), Gaps = 6/214 (2%)
Frame = +2
Query: 182 VFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAGHQTSAESWGTGRAVARIPRVRGGGTHR 361
VF +PIRPD+V VH M+KN RQPY VS++AGHQTSAESWGTGRAVARIPRV GGGTHR
Sbjct: 26 VFTSPIRPDIVQTVHTGMAKNKRQPYAVSEKAGHQTSAESWGTGRAVARIPRVSGGGTHR 85
Query: 362 SGQGAFGNMCRGGRMFAPTKPWRRWHXXXXXXXXXXXXXXXXXXXXXXXXXQARGHIIEK 541
+GQ AFGNMCR GRMFAPTK WR+WH ARGH I +
Sbjct: 86 AGQAAFGNMCRSGRMFAPTKVWRKWHQKINLGQKRFATVSALAASGVPALLFARGHQISE 145
Query: 542 IPELPLVVADKVQE---INKTKQAVIFLRRLKAWSDILKVYKSQXXXXXXXXXXXXXXXX 712
+ E+PLV+ +V E I +T A L+ + A D+ KV S+
Sbjct: 146 VAEVPLVINSEVFEGAKIARTAAAAGLLKTVGALKDVEKVKDSRKLRAGKGKLRGRRHRQ 205
Query: 713 XXXPLII---XXXDQGLTRAFRNIPGVXXLNVXS 805
PL++ + L RAFRN+PGV +V S
Sbjct: 206 RRGPLVVYDGATDGKELVRAFRNLPGVETCDVYS 239
>UniRef50_Q3SEA6 Cluster: Ribosomal protein L4, putative; n=2;
Oligohymenophorea|Rep: Ribosomal protein L4, putative -
Paramecium tetraurelia
Length = 406
Score = 188 bits (458), Expect = 2e-46
Identities = 93/207 (44%), Positives = 120/207 (57%), Gaps = 1/207 (0%)
Frame = +2
Query: 182 VFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAGHQTSAESWGTGRAVARIPRVRGGGTHR 361
VF+ PIRPD+V+ VH +++KN RQ + V+ +AG Q SAESWGTGRAVARIPRV G GTHR
Sbjct: 28 VFQTPIRPDIVSFVHTNIAKNRRQAHAVNPQAGMQHSAESWGTGRAVARIPRVSGSGTHR 87
Query: 362 SGQGAFGNMCRGGRMFAPTKPWRRWHXXXXXXXXXXXXXXXXXXXXXXXXXQARGHIIEK 541
SGQ AFGN CR GRM P K WRRWH ARGH I +
Sbjct: 88 SGQAAFGNQCRKGRMSLPIKVWRRWHRRVNIKQKRHAAATAVAATGIVPLVLARGHRISQ 147
Query: 542 IPELPLVVADKVQEINKTKQAVIFLRRLKAWSDILKVYKSQXXXXXXXXXXXXXXXXXXX 721
+P++PLVV DK++ KT A+ FL+R A+ D+ KV ++
Sbjct: 148 VPQIPLVVEDKIESYEKTTDALNFLKRFGAFEDVQKVVSTKVVRAGISKQRGKKYRVRKG 207
Query: 722 PLIIXXXDQG-LTRAFRNIPGVXXLNV 799
PL++ + L +AFRN+PGV +NV
Sbjct: 208 PLVVYFNENAKLLKAFRNVPGVEVVNV 234
>UniRef50_Q4XUM2 Cluster: 60S ribosomal subunit protein L4/L1,
putative; n=5; Plasmodium|Rep: 60S ribosomal subunit
protein L4/L1, putative - Plasmodium chabaudi
Length = 411
Score = 184 bits (449), Expect = 2e-45
Identities = 97/206 (47%), Positives = 118/206 (57%)
Frame = +2
Query: 182 VFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAGHQTSAESWGTGRAVARIPRVRGGGTHR 361
VF+ PIR DL+ + +MSKN R PY V AG++TSAESWGTGRAVARIPRV GGGTHR
Sbjct: 27 VFQTPIRHDLIEYIFSNMSKNIRHPYAVKLGAGYETSAESWGTGRAVARIPRVPGGGTHR 86
Query: 362 SGQGAFGNMCRGGRMFAPTKPWRRWHXXXXXXXXXXXXXXXXXXXXXXXXXQARGHIIEK 541
+GQ AFGNMCRGG MF PTK WRRW ARGH I
Sbjct: 87 AGQAAFGNMCRGGGMFNPTKIWRRWGRKINLKEKRYAVCSSIAASGITSLVLARGHRISN 146
Query: 542 IPELPLVVADKVQEINKTKQAVIFLRRLKAWSDILKVYKSQXXXXXXXXXXXXXXXXXXX 721
+ E+PLV ++ ++ + KTK A+ FL L ++ ++ KS
Sbjct: 147 LKEVPLVASNDIESMQKTKDALKFLISLGLRDEVNRLIKSXKLRARXGKMRNRKYKISNG 206
Query: 722 PLIIXXXDQGLTRAFRNIPGVXXLNV 799
PLII D G+ +AFRNIPGV NV
Sbjct: 207 PLIIYSXDSGIKKAFRNIPGVDLCNV 232
>UniRef50_Q4FXU6 Cluster: Ribosomal protein L1a, putative; n=1;
Leishmania major strain Friedlin|Rep: Ribosomal protein
L1a, putative - Leishmania major strain Friedlin
Length = 432
Score = 184 bits (448), Expect = 3e-45
Identities = 95/206 (46%), Positives = 120/206 (58%)
Frame = +2
Query: 182 VFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAGHQTSAESWGTGRAVARIPRVRGGGTHR 361
VF APIR D+V VH +M+KNSRQ Y V++ +G SA SWGTGRAVARIPR+ GGGT
Sbjct: 26 VFTAPIRSDIVKFVHTNMAKNSRQAYAVNRLSGMNHSAHSWGTGRAVARIPRISGGGTST 85
Query: 362 SGQGAFGNMCRGGRMFAPTKPWRRWHXXXXXXXXXXXXXXXXXXXXXXXXXQARGHIIEK 541
SG GAFGNMCRGGRMFAPTK +RRWH +RGH I
Sbjct: 86 SGAGAFGNMCRGGRMFAPTKIFRRWHRKINLHQKRFAVVSALAASSVPSLVMSRGHQIGN 145
Query: 542 IPELPLVVADKVQEINKTKQAVIFLRRLKAWSDILKVYKSQXXXXXXXXXXXXXXXXXXX 721
+PE+PLVV D +Q KTK+A+ FL+ + A D+ +V S+
Sbjct: 146 VPEVPLVVEDSIQGYEKTKEAMAFLKAIAAIDDVNRVNDSREIRAGRGKMRNRRYVARRG 205
Query: 722 PLIIXXXDQGLTRAFRNIPGVXXLNV 799
P+++ ++G TRAFRNI G+ NV
Sbjct: 206 PMLVMPNNKG-TRAFRNIFGLDLANV 230
>UniRef50_Q1KYM6 Cluster: RPL4; n=1; Streblomastix strix|Rep: RPL4 -
Streblomastix strix
Length = 492
Score = 177 bits (432), Expect = 2e-43
Identities = 91/203 (44%), Positives = 116/203 (57%)
Frame = +2
Query: 191 APIRPDLVNDVHVSMSKNSRQPYCVSKEAGHQTSAESWGTGRAVARIPRVRGGGTHRSGQ 370
+PIRPD+V+ VH++++KN RQP+ AGHQ SAESWGTGRAVAR+PR+ G GT R+GQ
Sbjct: 30 SPIRPDVVHFVHMNLAKNERQPFGRYYLAGHQHSAESWGTGRAVARVPRISGSGTSRNGQ 89
Query: 371 GAFGNMCRGGRMFAPTKPWRRWHXXXXXXXXXXXXXXXXXXXXXXXXXQARGHIIEKIPE 550
AF N RGG M++P K WRRWH ARGH I+ +PE
Sbjct: 90 AAFANSARGGHMYSPLKVWRRWHRMVNVTQRRFAMCSAIAASSNPSLVLARGHKIDNVPE 149
Query: 551 LPLVVADKVQEINKTKQAVIFLRRLKAWSDILKVYKSQXXXXXXXXXXXXXXXXXXXPLI 730
LPLVV+D V++I KTK+AV L LKA D+ +S+ LI
Sbjct: 150 LPLVVSDDVEQIKKTKEAVKVLAALKASDDVKHSAESKRIRVGSGKARNRRYTQRRGVLI 209
Query: 731 IXXXDQGLTRAFRNIPGVXXLNV 799
+ ++GL AFRNI GV NV
Sbjct: 210 VHDQNEGLANAFRNISGVDISNV 232
>UniRef50_A3FPV6 Cluster: 60S ribosomal protein-like, putative; n=4;
Cryptosporidium|Rep: 60S ribosomal protein-like,
putative - Cryptosporidium parvum Iowa II
Length = 394
Score = 175 bits (426), Expect = 1e-42
Identities = 94/208 (45%), Positives = 116/208 (55%), Gaps = 2/208 (0%)
Frame = +2
Query: 182 VFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAGHQTSAESWGTGRAVARIPRVRGGGTHR 361
VF +P+R DLV V +MSKN RQ Y VS +AGHQ SAESWGTGRAVARIPRV GT R
Sbjct: 28 VFVSPLRHDLVRYVFTNMSKNKRQAYGVSTKAGHQHSAESWGTGRAVARIPRVSASGTSR 87
Query: 362 SGQGAFGNMCRGGRMFAPTKPWRRWHXXXXXXXXXXXXXXXXXXXXXXXXXQARGHIIEK 541
SGQGAFGNMCRGG MF+P K +RR+H ARGH I
Sbjct: 88 SGQGAFGNMCRGGHMFSPNKTYRRFHRKINTTEKRHAVAAAIAATGCPSLVMARGHRINN 147
Query: 542 IPELPLVVADKVQEINKTKQAVIFLRRL-KAWSDILK-VYKSQXXXXXXXXXXXXXXXXX 715
+PELPLV+++++Q INKT AV F + K + +K + S
Sbjct: 148 VPELPLVISNEIQNINKTSTAVEFFKNFGKGLEEEMKRIESSIAIRCGKGKMRNRRRVCA 207
Query: 716 XXPLIIXXXDQGLTRAFRNIPGVXXLNV 799
PL++ D G+ +A RNI GV +V
Sbjct: 208 VGPLVVYAEDNGIVKAMRNIKGVDTCSV 235
>UniRef50_A7AUF0 Cluster: Ribosomal protein RPL4A; n=1; Babesia
bovis|Rep: Ribosomal protein RPL4A - Babesia bovis
Length = 360
Score = 172 bits (419), Expect = 8e-42
Identities = 92/203 (45%), Positives = 117/203 (57%), Gaps = 2/203 (0%)
Frame = +2
Query: 182 VFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAGHQTSAESWGTGRAVARIPRVRGGGTHR 361
VF AP+R DLV VH +MSKN RQ Y VSK +G+QTSA SWGTGRA+AR+PRV+GGGTHR
Sbjct: 26 VFSAPLRLDLVRIVHTNMSKNRRQAYAVSKMSGYQTSARSWGTGRAMARVPRVKGGGTHR 85
Query: 362 SGQGAFGNMCRGGRMFAPTKPWRRWHXXXXXXXXXXXXXXXXXXXXXXXXXQARGHIIEK 541
+GQ A+ N CR G M+APT+ WRRWH +RGH IE
Sbjct: 86 AGQAAYANFCRAGGMYAPTRVWRRWHRKVNLKEKRQALASALAATAVVPVVMSRGHRIEA 145
Query: 542 IPELPLVVADKVQEINKTKQAVIFLRRLKAWSDILKVYKSQXXXXXXXXXXXXXXXXXXX 721
+ E+P+VV D +++INKTK AV L + +++ ++ K
Sbjct: 146 LREVPMVVDDAIEQINKTKDAVKLLETIGLGAELKRIDK------VTGRARDGRKKRPVG 199
Query: 722 PLIIXXXD--QGLTRAFRNIPGV 784
PLII +G RAFRNIPGV
Sbjct: 200 PLIILRATAVEG-KRAFRNIPGV 221
>UniRef50_Q4UES5 Cluster: 60S ribosomal subunit protein L4/L1,
putative; n=2; Theileria|Rep: 60S ribosomal subunit
protein L4/L1, putative - Theileria annulata
Length = 426
Score = 167 bits (405), Expect = 4e-40
Identities = 86/208 (41%), Positives = 117/208 (56%), Gaps = 2/208 (0%)
Frame = +2
Query: 182 VFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAGHQTSAESWGTGRAVARIPRVRGGGTHR 361
VF P+R DLV+ VH +MSKN RQ Y +S+ +G+QTSA SWGTGRA++R PRV+GGGTHR
Sbjct: 26 VFSTPLRSDLVHYVHTNMSKNKRQAYAISRMSGYQTSARSWGTGRALSRTPRVKGGGTHR 85
Query: 362 SGQGAFGNMCRGGRMFAPTKPWRRWHXXXXXXXXXXXXXXXXXXXXXXXXXQARGHIIEK 541
SGQ A+ N CR G MFAPT+ WR WH +RGH +E
Sbjct: 86 SGQAAYANFCRAGGMFAPTRTWRHWHRKINLKEKRLALAVSVAATASVPLVMSRGHRVES 145
Query: 542 IPELPLVVADKVQEINKTKQAVIFLRRLKAWSDILKVYKSQXXXXXXXXXXXXXXXXXXX 721
+PELPLV+ D ++ + KT+ AV L + ++ +V ++
Sbjct: 146 VPELPLVLDDTMETLTKTRDAVELLNSMGLADELKRVSVTK-------RTKRKGKKRPVG 198
Query: 722 PLIIXXXD--QGLTRAFRNIPGVXXLNV 799
PL++ +G RAFRNIPGV ++V
Sbjct: 199 PLVVMRSTAVEG-KRAFRNIPGVDVMSV 225
>UniRef50_UPI0000499FAF Cluster: 60S ribosomal protein L4; n=5;
Entamoeba histolytica HM-1:IMSS|Rep: 60S ribosomal
protein L4 - Entamoeba histolytica HM-1:IMSS
Length = 431
Score = 166 bits (403), Expect = 7e-40
Identities = 92/208 (44%), Positives = 117/208 (56%), Gaps = 2/208 (0%)
Frame = +2
Query: 182 VFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAGHQTSAESWGTGRAVARIPRVRGGGTHR 361
VF APIR D+V+ V+ + SKN+RQP VS +AG Q SA SWGTGRAVARIPR+ G G+ R
Sbjct: 27 VFLAPIRGDVVHFVYRNQSKNTRQPEGVSTKAGKQHSAISWGTGRAVARIPRISGSGSGR 86
Query: 362 SGQGAFGNMCRGGRMFAPTKPWRRWHXXXXXXXXXXXXXXXXXXXXXXXXXQARGHIIEK 541
+GQGAFGNM R G MF+P K +R+W ARGH I
Sbjct: 87 NGQGAFGNMTRKGHMFSPLKNFRKWQRKTPKQMRRFAVASCIAASAVPALVSARGHHIAG 146
Query: 542 IPELPLVVADK-VQEINKTKQAVIFLRRLKAWSDILKVYKSQXXXXXXXXXXXXXXXXXX 718
+P++PLVV K + I KTKQAV L+++ A+SD+LKV S+
Sbjct: 147 VPQIPLVVNSKSISVIKKTKQAVYLLKKINAYSDVLKVIASKTVRAGQGKMRGRKIKERK 206
Query: 719 XPLIIXXXDQ-GLTRAFRNIPGVXXLNV 799
PL++ D +AFRNIPGV V
Sbjct: 207 GPLVVYGNDDLQAVKAFRNIPGVDTCRV 234
>UniRef50_Q4U6T4 Cluster: SL3; n=1; Brugia malayi|Rep: SL3 - Brugia
malayi (Filarial nematode worm)
Length = 306
Score = 163 bits (397), Expect = 4e-39
Identities = 72/86 (83%), Positives = 78/86 (90%)
Frame = +2
Query: 182 VFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAGHQTSAESWGTGRAVARIPRVRGGGTHR 361
VF+AP+RPD+V+ VH + KN RQPY VS EAGHQTSAESWGTGRAVARIPRVRGGGTHR
Sbjct: 144 VFRAPLRPDIVSFVHDQIRKNKRQPYAVSVEAGHQTSAESWGTGRAVARIPRVRGGGTHR 203
Query: 362 SGQGAFGNMCRGGRMFAPTKPWRRWH 439
SGQGAFGNMCRGGRMFAPTK +RRWH
Sbjct: 204 SGQGAFGNMCRGGRMFAPTKVFRRWH 229
>UniRef50_A2E1Z6 Cluster: Ribosomal protein, putative; n=3;
Trichomonas vaginalis G3|Rep: Ribosomal protein,
putative - Trichomonas vaginalis G3
Length = 370
Score = 161 bits (390), Expect = 3e-38
Identities = 78/206 (37%), Positives = 114/206 (55%)
Frame = +2
Query: 182 VFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAGHQTSAESWGTGRAVARIPRVRGGGTHR 361
VF PIR ++V +V+V+++KN++QP+ AG + SA SWGTGRA A +PRV G G++R
Sbjct: 24 VFDTPIRAEVVKEVYVNLAKNAQQPHANDPMAGKKVSAISWGTGRAKACVPRVNGSGSNR 83
Query: 362 SGQGAFGNMCRGGRMFAPTKPWRRWHXXXXXXXXXXXXXXXXXXXXXXXXXQARGHIIEK 541
+GQGA+ N CRGG F P RRW QARGH++ +
Sbjct: 84 NGQGAYANFCRGGHRFNPPTLLRRWFRPVPSRQRKFAIASAIAATAVVPLVQARGHVLGE 143
Query: 542 IPELPLVVADKVQEINKTKQAVIFLRRLKAWSDILKVYKSQXXXXXXXXXXXXXXXXXXX 721
+ E+P+VV D VQEI +T+ AV L+++ + D+ +V
Sbjct: 144 VKEVPIVVVDAVQEIKRTRDAVELLKKVGVYGDVQRVLDGSVHRSSKGKFRRAAYKTKKG 203
Query: 722 PLIIXXXDQGLTRAFRNIPGVXXLNV 799
PL+I D+G+ +AFRNIPGV ++V
Sbjct: 204 PLVIYNEDKGIVKAFRNIPGVETISV 229
>UniRef50_Q0U8Q3 Cluster: Putative uncharacterized protein; n=1;
Phaeosphaeria nodorum|Rep: Putative uncharacterized
protein - Phaeosphaeria nodorum (Septoria nodorum)
Length = 349
Score = 156 bits (378), Expect = 8e-37
Identities = 84/195 (43%), Positives = 104/195 (53%), Gaps = 6/195 (3%)
Frame = +2
Query: 239 KNSRQPYCVSKEAGHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPT 418
++++ V +AGHQTSAESWGTGRAVARIPRV GGGTHR+GQ AFGNMCR GRMFAPT
Sbjct: 22 ESTKDTLTVPNKAGHQTSAESWGTGRAVARIPRVSGGGTHRAGQAAFGNMCRSGRMFAPT 81
Query: 419 KPWRRWHXXXXXXXXXXXXXXXXXXXXXXXXXQARGHIIEKIPELPLVVADKV---QEIN 589
K WR+WH ARGH + +PE+PLV++ I
Sbjct: 82 KVWRKWHQKINLNQKRFATASALAASGSPALLMARGHNVSTVPEVPLVISSTAFADAAIR 141
Query: 590 KTKQAVIFLRRLKAWSDILKVYKSQXXXXXXXXXXXXXXXXXXXPLIIXXXDQG---LTR 760
KT AV L+ + A +D K S+ PL+I D+ L +
Sbjct: 142 KTSAAVALLKAVGAGADCEKAKNSRKLRAGKGKLRGRRHKQRRGPLVIYNPDEDGKELVK 201
Query: 761 AFRNIPGVXXLNVXS 805
AFRNIPGV +V S
Sbjct: 202 AFRNIPGVETSSVYS 216
>UniRef50_Q8SRC2 Cluster: 60S RIBOSOMAL PROTEIN L4; n=1;
Encephalitozoon cuniculi|Rep: 60S RIBOSOMAL PROTEIN L4 -
Encephalitozoon cuniculi
Length = 335
Score = 152 bits (369), Expect = 1e-35
Identities = 84/208 (40%), Positives = 106/208 (50%)
Frame = +2
Query: 182 VFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAGHQTSAESWGTGRAVARIPRVRGGGTHR 361
VF PIR DLV + +RQPY VSK AG Q SAESWGTGRA+AR+PRV+GGGT R
Sbjct: 24 VFSVPIRQDLVLKTYSLYRMKTRQPYAVSKNAGMQHSAESWGTGRAIARVPRVKGGGTRR 83
Query: 362 SGQGAFGNMCRGGRMFAPTKPWRRWHXXXXXXXXXXXXXXXXXXXXXXXXXQARGHIIEK 541
+GQGAF N CR GRM PTK RRW +ARGH I
Sbjct: 84 AGQGAFANFCRKGRMAHPTKTHRRWARKVVENTKKIAEAMAVAASAQASLVEARGHRISD 143
Query: 542 IPELPLVVADKVQEINKTKQAVIFLRRLKAWSDILKVYKSQXXXXXXXXXXXXXXXXXXX 721
+ LP++V+D + + KTK AV LR L ++ +V KS+
Sbjct: 144 VKMLPIIVSDDIAKARKTKDAVEILRNLNMTEELKRVEKSRGVRCGKGKMRNRRYTQRKG 203
Query: 722 PLIIXXXDQGLTRAFRNIPGVXXLNVXS 805
LI+ + FRNI GV +++ S
Sbjct: 204 ILIVHGESSEML-GFRNIRGVDQMSIDS 230
>UniRef50_Q98S44 Cluster: 60s ribosomal protein L1; n=2;
Cryptomonadaceae|Rep: 60s ribosomal protein L1 -
Guillardia theta (Cryptomonas phi)
Length = 255
Score = 143 bits (347), Expect = 4e-33
Identities = 69/148 (46%), Positives = 87/148 (58%)
Frame = +2
Query: 182 VFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAGHQTSAESWGTGRAVARIPRVRGGGTHR 361
VF + IR D+V VH +M KN RQ Y VS AG TSA SWGTGRAV+R+PRV G GTHR
Sbjct: 22 VFFSKIRVDIVRFVHKNMCKNKRQVYAVSSTAGMGTSAVSWGTGRAVSRVPRVPGSGTHR 81
Query: 362 SGQGAFGNMCRGGRMFAPTKPWRRWHXXXXXXXXXXXXXXXXXXXXXXXXXQARGHIIEK 541
SGQGA N CRGGR+F PT WR+WH +RG+ ++
Sbjct: 82 SGQGAIANFCRGGRIFNPTTIWRKWHHKINKNQRKSAIFSAIASSSIVSIIVSRGYRVKT 141
Query: 542 IPELPLVVADKVQEINKTKQAVIFLRRL 625
IPE+P V+ D +++I KT+ + L L
Sbjct: 142 IPEIPFVIEDSIEKIPKTRDLIKILTTL 169
>UniRef50_Q7R0P2 Cluster: GLP_79_45017_44067; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_79_45017_44067 - Giardia lamblia
ATCC 50803
Length = 316
Score = 120 bits (289), Expect = 5e-26
Identities = 72/208 (34%), Positives = 96/208 (46%)
Frame = +2
Query: 182 VFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAGHQTSAESWGTGRAVARIPRVRGGGTHR 361
VF P+RPD++N VH + K R PY VS+ AG Q +A SWG GRAVAR+PR G
Sbjct: 23 VFNVPLRPDIINFVHTQLRKCLRTPYAVSRYAGVQCTAHSWGPGRAVARLPRKHG----- 77
Query: 362 SGQGAFGNMCRGGRMFAPTKPWRRWHXXXXXXXXXXXXXXXXXXXXXXXXXQARGHIIEK 541
G GA+ N RGG M PT RRW +ARGH I
Sbjct: 78 -GIGAYANFARGGHMAHPTTVIRRWCRKVNLNQRRYAVASALAASANAALVEARGHRIAD 136
Query: 542 IPELPLVVADKVQEINKTKQAVIFLRRLKAWSDILKVYKSQXXXXXXXXXXXXXXXXXXX 721
+P +PLVV + KTK A+ ++ + D+ + S+
Sbjct: 137 VPSIPLVV--DTDNVTKTKDALAIIKAVGVLRDVERCKDSRHIRAGRGKMRNRRYITRKG 194
Query: 722 PLIIXXXDQGLTRAFRNIPGVXXLNVXS 805
PL+I + + R FRN+PGV +V S
Sbjct: 195 PLVIYNTED-VARGFRNLPGVDLCHVSS 221
>UniRef50_Q5MGK5 Cluster: Ribosomal protein 23; n=2;
Endopterygota|Rep: Ribosomal protein 23 - Lonomia
obliqua (Moth)
Length = 274
Score = 117 bits (281), Expect = 4e-25
Identities = 55/93 (59%), Positives = 67/93 (72%)
Frame = +2
Query: 521 RGHIIEKIPELPLVVADKVQEINKTKQAVIFLRRLKAWSDILKVYKSQXXXXXXXXXXXX 700
RG++++ + E+PLVV+DK+QEINKTKQAVIFLRR+KAWSD+LKVYKSQ
Sbjct: 5 RGYVVDNVSEIPLVVSDKIQEINKTKQAVIFLRRIKAWSDVLKVYKSQRLRAGKGKMRNR 64
Query: 701 XXXXXXXPLIIXXXDQGLTRAFRNIPGVXXLNV 799
PLII DQGLTR+FRNIPGV +NV
Sbjct: 65 RRLHRKGPLIIYNKDQGLTRSFRNIPGVDMVNV 97
>UniRef50_Q8TY91 Cluster: 50S ribosomal protein L4P; n=13;
Euryarchaeota|Rep: 50S ribosomal protein L4P -
Methanopyrus kandleri
Length = 260
Score = 105 bits (253), Expect = 1e-21
Identities = 59/201 (29%), Positives = 92/201 (45%), Gaps = 1/201 (0%)
Frame = +2
Query: 185 FKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAGHQTSAESWGTGRAVARIPRVRGGGTHRS 364
F+ P+R DL+ ++ N RQPY AG +TSAESWG G VA +PRV+G +
Sbjct: 22 FEEPVRKDLIRRAVLAAQANRRQPYGTDPRAGFRTSAESWGAGHGVAMVPRVKGRRHPAA 81
Query: 365 GQGAFGNMCRGG-RMFAPTKPWRRWHXXXXXXXXXXXXXXXXXXXXXXXXXQARGHIIEK 541
G+ A GG + APT P + W + RGH+I+
Sbjct: 82 GRAARVAQAVGGQKAHAPT-PEKDWTQRVNRKERRAALRSALAATAKPEFVKERGHVIDD 140
Query: 542 IPELPLVVADKVQEINKTKQAVIFLRRLKAWSDILKVYKSQXXXXXXXXXXXXXXXXXXX 721
+P LP+VV D+++ +NK ++ F + + W+D+ + ++
Sbjct: 141 VPHLPVVVVDELKSLNKAREVREFFKSVGLWADVERAKSNRRIRAGKGKRRGRRYVKPKS 200
Query: 722 PLIIXXXDQGLTRAFRNIPGV 784
LI+ D+G+ RN PGV
Sbjct: 201 VLIVVDEDEGIKLGARNHPGV 221
>UniRef50_Q8ZW51 Cluster: 50S ribosomal protein L4P; n=9;
Archaea|Rep: 50S ribosomal protein L4P - Pyrobaculum
aerophilum
Length = 283
Score = 91.5 bits (217), Expect = 2e-17
Identities = 61/206 (29%), Positives = 86/206 (41%), Gaps = 1/206 (0%)
Frame = +2
Query: 185 FKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAGHQTSAESWGTGRAVARIPRVRGGGTHRS 364
F PIRPDL+ ++S QP V + AG + S ES+G G +ARIPR +G R
Sbjct: 48 FLEPIRPDLIRRAYLSALSARFQPKGVYEGAGKEHSCESFGVGLGIARIPRYKGSLWPR- 106
Query: 365 GQGAFGNMCRGGRMFAPTKPWRRWHXXXXXXXXXXXXXXXXXXXXXXXXXQARGHIIEKI 544
G F RGGR P K ++ H ARGH++EK+
Sbjct: 107 --GCFAPNTRGGRRAHPPKVEKKLHEEINKKEKKLAIRSAIAATAYRSWVAARGHVVEKV 164
Query: 545 PELPLVVADKVQEINKTKQAVIFLRRLKAWSDILKVYKSQXXXXXXXXXXXXXXXXXXXP 724
P LP+VV ++IN+ K+A L W D+ + +
Sbjct: 165 PSLPVVVVGDAEKINRAKEAKKLFEALGLWPDVERAAEGVKIRAGKGKMRGRRYKEPKSV 224
Query: 725 L-IIXXXDQGLTRAFRNIPGVXXLNV 799
L ++ + L A RN PGV + V
Sbjct: 225 LVVVSDLNAPLIAAVRNFPGVDVVAV 250
>UniRef50_Q00UB0 Cluster: Ribosomal protein RPL1/RPL2/RL4L4; n=1;
Ostreococcus tauri|Rep: Ribosomal protein
RPL1/RPL2/RL4L4 - Ostreococcus tauri
Length = 404
Score = 89.8 bits (213), Expect = 8e-17
Identities = 66/215 (30%), Positives = 88/215 (40%), Gaps = 9/215 (4%)
Frame = +2
Query: 182 VFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAGHQTSAESWGTGRAVARIPRVRGGGTHR 361
VF +PIR D+VN VH ++KN + + + A PR G
Sbjct: 23 VFLSPIRADIVNAVHTGLAKNDSTTDEIQLCFLLDSQGKRTPCTDVPATKPRPSPGAP-- 80
Query: 362 SGQGAFGNMCRGGRMFAPTK---------PWRRWHXXXXXXXXXXXXXXXXXXXXXXXXX 514
+ +CR AP K WRRWH
Sbjct: 81 VARSLVFRVCRAVVPTAPVKGRSVTCAAVTWRRWHRRVNIKEKRYAVCSAIAASAVPSLL 140
Query: 515 QARGHIIEKIPELPLVVADKVQEINKTKQAVIFLRRLKAWSDILKVYKSQXXXXXXXXXX 694
ARGH +E +PE+PLVV D I KT +AV L++L A++DI KV S+
Sbjct: 141 LARGHRVEGVPEVPLVVDDSASSIKKTAKAVELLKQLGAYADIEKVKASRNVRSGKGKMR 200
Query: 695 XXXXXXXXXPLIIXXXDQGLTRAFRNIPGVXXLNV 799
PL++ D G+TRAFRNIPGV +V
Sbjct: 201 NRRYVQRRGPLVVYSEDNGVTRAFRNIPGVELCSV 235
>UniRef50_Q3LWC7 Cluster: Ribosomal protein L4A; n=1; Bigelowiella
natans|Rep: Ribosomal protein L4A - Bigelowiella natans
(Pedinomonas minutissima) (Chlorarachnion sp.(strain
CCMP 621))
Length = 278
Score = 86.2 bits (204), Expect = 9e-16
Identities = 39/125 (31%), Positives = 65/125 (52%)
Frame = +2
Query: 275 AGHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWHXXXXX 454
+G+Q SA+SWG GR +ARIPR++G GT ++GQGA NMCRGGR+F ++W+
Sbjct: 59 SGNQVSAKSWGPGRGLARIPRIKGSGTRKAGQGALANMCRGGRLFGNRNYSKKWNIKTNR 118
Query: 455 XXXXXXXXXXXXXXXXXXXXQARGHIIEKIPELPLVVADKVQEINKTKQAVIFLRRLKAW 634
+RGH ++ + P+++ ++ I + ++ L+ +
Sbjct: 119 KVKVSAFKTALLSTLFETLVVSRGHSLKDVKNFPMIIDSILKYIWHPSELLMLLKLYGGY 178
Query: 635 SDILK 649
SD K
Sbjct: 179 SDFKK 183
>UniRef50_Q2NFV7 Cluster: 50S ribosomal protein L4P; n=2;
Euryarchaeota|Rep: 50S ribosomal protein L4P -
Methanosphaera stadtmanae (strain DSM 3091)
Length = 259
Score = 84.2 bits (199), Expect = 4e-15
Identities = 51/206 (24%), Positives = 88/206 (42%)
Frame = +2
Query: 182 VFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAGHQTSAESWGTGRAVARIPRVRGGGTHR 361
+F+ RPD++ +SM QP+ AG +T+AES+G+GR A +PRV+G
Sbjct: 22 IFEEEYRPDVIKRAVISMQTARIQPWGTDPMAGKRTTAESFGSGRGAAMVPRVKG----- 76
Query: 362 SGQGAFGNMCRGGRMFAPTKPWRRWHXXXXXXXXXXXXXXXXXXXXXXXXXQARGHIIEK 541
S + AF GGR P + +H + RGH + +
Sbjct: 77 SSKAAFVPQAIGGRKAHPPRVNTIYHEKINKKERTLAIRSAIAATANKELVEQRGHQVSE 136
Query: 542 IPELPLVVADKVQEINKTKQAVIFLRRLKAWSDILKVYKSQXXXXXXXXXXXXXXXXXXX 721
+ ++P V+ D+++ + TK+ + L DI++ K +
Sbjct: 137 LEQIPFVIDDEIETVKTTKETREIFKDLGIMDDIVRAKKGRKIKSGKGKLRGRKYRTPKG 196
Query: 722 PLIIXXXDQGLTRAFRNIPGVXXLNV 799
PL++ D+G++ RN GV + V
Sbjct: 197 PLVVVGNDRGISLGARNHAGVDVVEV 222
>UniRef50_O28355 Cluster: 50S ribosomal protein L4P; n=9;
Euryarchaeota|Rep: 50S ribosomal protein L4P -
Archaeoglobus fulgidus
Length = 252
Score = 75.4 bits (177), Expect = 2e-12
Identities = 48/201 (23%), Positives = 83/201 (41%)
Frame = +2
Query: 182 VFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAGHQTSAESWGTGRAVARIPRVRGGGTHR 361
VF RPD++ +++ + RQPY + +G S E+WG G AR+PR + G
Sbjct: 21 VFAEEFRPDIIKRAVLALQSHRRQPYGPNPLSGVDYSWENWGPGHGYARVPRWKLG---- 76
Query: 362 SGQGAFGNMCRGGRMFAPTKPWRRWHXXXXXXXXXXXXXXXXXXXXXXXXXQARGHIIEK 541
+ GGR P KP R+W + R H+ E
Sbjct: 77 -RRAVVVPQAVGGRRAHPPKPERKWAEKINKKEMRKALKSAIAATANEELVRQRSHVFE- 134
Query: 542 IPELPLVVADKVQEINKTKQAVIFLRRLKAWSDILKVYKSQXXXXXXXXXXXXXXXXXXX 721
ELP VV+++++ + +TK R + ++D+ + + +
Sbjct: 135 -GELPKVVSNELESVKRTKDVAEVFRAIGVYADVERAKERKRYRAGRGKMRGRRYVKKKS 193
Query: 722 PLIIXXXDQGLTRAFRNIPGV 784
L++ D G+ +A +N+PGV
Sbjct: 194 VLLVVGKDDGVVKAAKNLPGV 214
>UniRef50_Q9UXA6 Cluster: 50S ribosomal protein L4P; n=3;
Archaea|Rep: 50S ribosomal protein L4P - Sulfolobus
solfataricus
Length = 267
Score = 74.9 bits (176), Expect = 2e-12
Identities = 52/206 (25%), Positives = 85/206 (41%), Gaps = 1/206 (0%)
Frame = +2
Query: 182 VFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAGHQTSAESWGTGRAVARIPRVRGGGTHR 361
+F P+R DL+ V ++ +S QP AG +TSAES+G +AR+PRV+
Sbjct: 28 IFSFPVRKDLIRRVFIAEFTHSLQPKGRDPNAGKRTSAESFGINLGMARVPRVK-----N 82
Query: 362 SGQGAFGNMCRGGRMFAPTKPWRRWHXXXXXXXXXXXXXXXXXXXXXXXXXQARGHIIEK 541
SG+ A GGR+ P ++ +ARGH+ +
Sbjct: 83 SGEAALAPNTVGGRLAFPPSVNKKLAEEANVKEKRLAVISALSATADIAFVRARGHVFKD 142
Query: 542 IPELPLVVADKVQEINKTKQAVIFLRRLKAWSDILKVYKSQXXXXXXXXXXXXXXXXXXX 721
P+VV D + + T + FL+++ + D+ +V +
Sbjct: 143 SVRFPIVVTDDIVNLKTTSEVEEFLKKIGVYDDVERVKERIRIRAGKGKMRGRKYKEPIG 202
Query: 722 PLIIXXXDQG-LTRAFRNIPGVXXLN 796
PLII + +A RN+ GV +N
Sbjct: 203 PLIIVHDSNSPIIKAARNLAGVDVVN 228
>UniRef50_UPI00005A2ACC Cluster: PREDICTED: similar to ribosomal
protein L4; n=1; Canis lupus familiaris|Rep: PREDICTED:
similar to ribosomal protein L4 - Canis familiaris
Length = 248
Score = 74.5 bits (175), Expect = 3e-12
Identities = 33/49 (67%), Positives = 39/49 (79%)
Frame = +2
Query: 206 DLVNDVHVSMSKNSRQPYCVSKEAGHQTSAESWGTGRAVARIPRVRGGG 352
D+VN VH ++ KN QPY VS+ AG+QTSAESWGTGRA +PRVRGGG
Sbjct: 25 DVVNFVHSNLHKNDSQPYAVSESAGYQTSAESWGTGRARGPMPRVRGGG 73
Score = 43.6 bits (98), Expect = 0.007
Identities = 23/64 (35%), Positives = 31/64 (48%)
Frame = +2
Query: 572 KVQEINKTKQAVIFLRRLKAWSDILKVYKSQXXXXXXXXXXXXXXXXXXXPLIIXXXDQG 751
KV+ KTK+ V+ L++LKAW+DI KVY SQ II D G
Sbjct: 98 KVEGYKKTKEEVLLLKKLKAWNDIKKVYASQRMRAGKGKMRNRRPIQRRGSCIIYNEDNG 157
Query: 752 LTRA 763
+ +A
Sbjct: 158 IIKA 161
>UniRef50_A0RVX5 Cluster: Ribosomal protein L4; n=2;
Thermoprotei|Rep: Ribosomal protein L4 - Cenarchaeum
symbiosum
Length = 271
Score = 69.7 bits (163), Expect = 9e-11
Identities = 46/156 (29%), Positives = 67/156 (42%), Gaps = 2/156 (1%)
Frame = +2
Query: 182 VFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAGHQTSAESWG--TGRAVARIPRVRGGGT 355
VF P R DL+ + + + QP AG SA+S TG ARI R++GGG
Sbjct: 21 VFGTPYRRDLIKKAYTILDTHHFQPKGTHPTAGMDVSADSLNPPTGHGQARIARMKGGGG 80
Query: 356 HRSGQGAFGNMCRGGRMFAPTKPWRRWHXXXXXXXXXXXXXXXXXXXXXXXXXQARGHII 535
R G+ RGGR P K + H RGHII
Sbjct: 81 RRRGEAGEVASIRGGRQAHPPKVQKVIHKKINKKEKKLALCSAIAATASKSTVAGRGHII 140
Query: 536 EKIPELPLVVADKVQEINKTKQAVIFLRRLKAWSDI 643
+ I ELP+V++D ++ ++K + L L ++D+
Sbjct: 141 DGI-ELPIVISDDIESVSKASEVRKILSALGLFADV 175
>UniRef50_UPI00005A24EF Cluster: PREDICTED: similar to ribosomal
protein L4; n=1; Canis lupus familiaris|Rep: PREDICTED:
similar to ribosomal protein L4 - Canis familiaris
Length = 253
Score = 66.9 bits (156), Expect = 6e-10
Identities = 29/49 (59%), Positives = 40/49 (81%)
Frame = +2
Query: 518 ARGHIIEKIPELPLVVADKVQEINKTKQAVIFLRRLKAWSDILKVYKSQ 664
++GH I ++PELPLVV DKV+ KT++AV+ L++LKAW+DI KVY SQ
Sbjct: 2 SKGHRIGEVPELPLVVEDKVEGYKKTEEAVLLLKKLKAWNDIKKVYASQ 50
>UniRef50_A7R5H8 Cluster: Chromosome undetermined scaffold_974,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome undetermined scaffold_974, whole genome
shotgun sequence - Vitis vinifera (Grape)
Length = 386
Score = 63.7 bits (148), Expect = 6e-09
Identities = 35/95 (36%), Positives = 46/95 (48%), Gaps = 1/95 (1%)
Frame = +2
Query: 518 ARGHIIEKIPELPLVVADKVQEINKTKQAVIFLRRLKAWSDILKVYKSQXXXXXXXXXXX 697
ARGH IE +PELPLV+ D + + KT A+ L++ A+ D K S
Sbjct: 2 ARGHRIESVPELPLVIGDSAESVEKTSAAIDILKQFDAYLDTEKAKDSHAIHPGKGKMRN 61
Query: 698 XXXXXXXXPLIIXXXDQG-LTRAFRNIPGVXXLNV 799
PLI+ + L +AFRNIPGV NV
Sbjct: 62 RRYISRKGPLIVYGMEGAKLVKAFRNIPGVEVANV 96
>UniRef50_Q9HIR0 Cluster: 50S ribosomal protein L4P; n=4;
Thermoplasmatales|Rep: 50S ribosomal protein L4P -
Thermoplasma acidophilum
Length = 255
Score = 61.7 bits (143), Expect = 2e-08
Identities = 48/201 (23%), Positives = 81/201 (40%)
Frame = +2
Query: 182 VFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAGHQTSAESWGTGRAVARIPRVRGGGTHR 361
VF +R D++ ++S + RQPY S AG + + G ++R+PR+ GG
Sbjct: 23 VFDTEVREDIIRRAFRAISLSMRQPYGSSPLAGMRRVGHTTRPGLGISRMPRIAGGSRVV 82
Query: 362 SGQGAFGNMCRGGRMFAPTKPWRRWHXXXXXXXXXXXXXXXXXXXXXXXXXQARGHIIEK 541
A G G+ + + + + RGH ++
Sbjct: 83 GIASAVG-----GKSAHSPRTTKNLYVKINDRERKMAKYSAIALTASVEAVKKRGHRFKE 137
Query: 542 IPELPLVVADKVQEINKTKQAVIFLRRLKAWSDILKVYKSQXXXXXXXXXXXXXXXXXXX 721
+LP+VV D V+ INKTK A+ L+ L + DI + + +
Sbjct: 138 GLKLPIVVEDGVEGINKTKDAIALLKNLGVYEDIERSREGKHIRAGRGKMRGRRYKQPKS 197
Query: 722 PLIIXXXDQGLTRAFRNIPGV 784
LI+ + +AFR++PGV
Sbjct: 198 VLIVARNSSAM-KAFRSLPGV 217
>UniRef50_Q9YFM1 Cluster: 50S ribosomal protein L4P; n=8;
Archaea|Rep: 50S ribosomal protein L4P - Aeropyrum
pernix
Length = 272
Score = 56.4 bits (130), Expect = 9e-07
Identities = 44/157 (28%), Positives = 67/157 (42%), Gaps = 1/157 (0%)
Frame = +2
Query: 182 VFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAGHQTSAESWGTGRAVARIPRVRGGGTHR 361
+F+ P+R DL+ +S QP AG +TSA S G GR VAR+PR++G
Sbjct: 34 IFRFPVRKDLIRRAFLSEFTARLQPKGRDPMAGKRTSAVSLGVGRGVARVPRIKG----- 88
Query: 362 SGQGAFGNMCRGGRMFAPTKPWRRWHXXXXXXXXXXXXXXXXXXXXXXXXXQARGHIIEK 541
S + A NM RGGR P + + + RGH
Sbjct: 89 SLRAALVNMARGGRAAHPPRVEKVLKEYINKKEKRLATISAISATSREDLVRQRGHRF-S 147
Query: 542 IPELPLVVADKV-QEINKTKQAVIFLRRLKAWSDILK 649
LP+V+ V +I+ ++A L + + D+L+
Sbjct: 148 AETLPIVLDSSVLAKISTAREARSLLESVGVYEDVLR 184
>UniRef50_Q4FXU7 Cluster: Putative uncharacterized protein; n=2;
Leishmania|Rep: Putative uncharacterized protein -
Leishmania major strain Friedlin
Length = 534
Score = 56.0 bits (129), Expect = 1e-06
Identities = 51/171 (29%), Positives = 70/171 (40%), Gaps = 4/171 (2%)
Frame = +1
Query: 298 IMGYRTCCCPNSACPWWWYP*VRSGCLR*HVSWWTYVRPHEALAALAPSRQPPTAESGLG 477
++G+R C SA W VR C+R HV WW +VR E L LAP QP A L
Sbjct: 117 LVGHRPRRCAYSAHQRRWNEHVRRRCVRQHVPWWPHVRADEDLPPLAPQDQP--APEALR 174
Query: 478 SSRCCYWRPSARSG*RTHY*KDSRA--SLGCSRQSPGDQQDQTGCHLPEAPQGMV*YP*G 651
C A +G RA + G PG ++D+ G +PE +
Sbjct: 175 CGVCARRVVCAVAGDVARPPDRQRAGGAAGGGGLDPGLREDEGGYGVPEGDRCDRRREPR 234
Query: 652 VQVSASSCW*G*NAXPSSYPA*GTPHNXXXGSGSD--SRXPXHPRGGXPEC 798
+++ CW +A P P G P + + +R P H R G EC
Sbjct: 235 ERLARDPCWPRQDAQP---PLRGAPRSDAGDAEQQGHARVPQHLRAGPGEC 282
>UniRef50_P12735 Cluster: 50S ribosomal protein L4P; n=1; Haloarcula
marismortui|Rep: 50S ribosomal protein L4P - Haloarcula
marismortui (Halobacterium marismortui)
Length = 246
Score = 54.4 bits (125), Expect = 3e-06
Identities = 42/154 (27%), Positives = 66/154 (42%)
Frame = +2
Query: 182 VFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAGHQTSAESWGTGRAVARIPRVRGGGTHR 361
VF+ P+R DL+ + N +Q Y + AG +T AES+G+GR A +P+ + G R
Sbjct: 21 VFETPVRSDLIGKAVRAAQANRKQDYGSDEYAGLRTPAESFGSGRGQAHVPK-QDGRARR 79
Query: 362 SGQGAFGNMCRGGRMFAPTKPWRRWHXXXXXXXXXXXXXXXXXXXXXXXXXQARGHIIEK 541
Q GR P K + RGH ++
Sbjct: 80 VPQAV------KGRSAHPPKTEKDRSLDLNDKERQLAVRSALAATADADLVADRGHEFDR 133
Query: 542 IPELPLVVADKVQEINKTKQAVIFLRRLKAWSDI 643
E+P+VV+D +++ KT++ V L L +DI
Sbjct: 134 -DEVPVVVSDDFEDLVKTQEVVSLLEALDVHADI 166
>UniRef50_P60847 Cluster: 50S ribosomal protein L4P; n=1;
Nanoarchaeum equitans|Rep: 50S ribosomal protein L4P -
Nanoarchaeum equitans
Length = 268
Score = 53.2 bits (122), Expect = 8e-06
Identities = 51/211 (24%), Positives = 86/211 (40%), Gaps = 11/211 (5%)
Frame = +2
Query: 185 FKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAGHQTSA------ESWGT--GRAVARIPRV 340
F IR D++ +++ + RQPY S AG Q SA SW T GR ++R+ R
Sbjct: 22 FNEKIRFDVIKRAFLAIQSHKRQPYGASPIAGKQHSAWTSKRRRSWRTSYGRGISRVSRA 81
Query: 341 ---RGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWHXXXXXXXXXXXXXXXXXXXXXXXX 511
R G +G + P K + W+
Sbjct: 82 ILRRHGALFYWVARNIAQAVKGKKAHPP-KAEKDWYEKINKKERRLAIRSALAATKELDL 140
Query: 512 XQARGHIIEKIPELPLVVADKVQEINKTKQAVIFLRRLKAWSDILKVYKSQXXXXXXXXX 691
+ARGHII+K +P+VV D ++++ KTK+ L +L ++ +VY+ +
Sbjct: 141 VKARGHIIDK--PVPIVV-DGLEQLRKTKEIQQLLLKLGLEKELERVYEIKRRAGKGKRR 197
Query: 692 XXXXXXXXXXPLIIXXXDQGLTRAFRNIPGV 784
+++ ++ L +A NIPG+
Sbjct: 198 GRAYIERKGPLIVVNDYNEQLFKAVDNIPGL 228
>UniRef50_Q95YH2 Cluster: Ribosomal protein L4; n=1; Paramecium
caudatum|Rep: Ribosomal protein L4 - Paramecium caudatum
Length = 252
Score = 49.6 bits (113), Expect = 1e-04
Identities = 26/80 (32%), Positives = 40/80 (50%), Gaps = 1/80 (1%)
Frame = +2
Query: 563 VADKVQEINKTKQAVIFLRRLKAWSDILKVYKSQXXXXXXXXXXXXXXXXXXXPLIIXXX 742
V DK++ KTK A+ FL+R A+ D+ KV ++ PL++
Sbjct: 1 VEDKIESYEKTKDALNFLKRFGAFEDVQKVVSTKTIRAGVSKSRGKKYRVRKGPLVVYFN 60
Query: 743 DQG-LTRAFRNIPGVXXLNV 799
+ L +AFRN+PGV +NV
Sbjct: 61 ENAKLLKAFRNVPGVEVVNV 80
>UniRef50_A7QKL2 Cluster: Chromosome chr2 scaffold_113, whole genome
shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome
chr2 scaffold_113, whole genome shotgun sequence - Vitis
vinifera (Grape)
Length = 145
Score = 41.9 bits (94), Expect = 0.020
Identities = 18/44 (40%), Positives = 28/44 (63%)
Frame = +2
Query: 518 ARGHIIEKIPELPLVVADKVQEINKTKQAVIFLRRLKAWSDILK 649
ARGH IE + ELPLV+ D + ++KT + L+++ A D+ K
Sbjct: 24 ARGHRIESVLELPLVIGDSTKSVDKTSTTIDILKQVGACPDVEK 67
>UniRef50_Q673S8 Cluster: Ribosomal protein L4; n=3; cellular
organisms|Rep: Ribosomal protein L4 - uncultured marine
group II euryarchaeote DeepAnt-JyKC7
Length = 304
Score = 38.3 bits (85), Expect = 0.25
Identities = 51/223 (22%), Positives = 75/223 (33%), Gaps = 22/223 (9%)
Frame = +2
Query: 182 VFKAPIRPDLVNDVHVSMSKNSRQPYCVSK-------EAGHQTSAESWGTGRAVARIPRV 340
VF IR DL+ ++ N RQ Y + +AG + S E WG GR V+RI R
Sbjct: 53 VFSGEIREDLIRRAVLASRANRRQSYGHREHDGKRKPQAGMKHSVEWWGKGRGVSRIMRK 112
Query: 341 RGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWHXXXXXXXXXXXXXXXXXXXXXXXXXQA 520
G T A RGGR K + W
Sbjct: 113 AGQRT-----AAQNPHTRGGRRAHGPKVDKDWSQKINSKENRIARDSAIAASASSNLVSE 167
Query: 521 RGHIIEKIPELPLVV---------ADKVQEIN------KTKQAVIFLRRLKAWSDILKVY 655
RGH E P+++ D+ ++ T++ V + L +D+ +
Sbjct: 168 RGHHFEASLRFPIIIDGYVESREGGDEKYDLESLPLQYSTRKFVAMMEGLGLGADLDRAR 227
Query: 656 KSQXXXXXXXXXXXXXXXXXXXPLIIXXXDQGLTRAFRNIPGV 784
+ L++ GL +A RNIPGV
Sbjct: 228 TGRTIRAGKGTMRGRKYRTPKSILLVVSQTNGLAKAARNIPGV 270
>UniRef50_A7Q400 Cluster: Chromosome chr13 scaffold_48, whole genome
shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome
chr13 scaffold_48, whole genome shotgun sequence - Vitis
vinifera (Grape)
Length = 131
Score = 37.9 bits (84), Expect = 0.32
Identities = 16/18 (88%), Positives = 16/18 (88%)
Frame = -3
Query: 417 VGANIRPPRHMLPKAP*P 364
VGANI PPRHMLPKAP P
Sbjct: 107 VGANILPPRHMLPKAPWP 124
>UniRef50_Q9UFE2 Cluster: Putative uncharacterized protein
DKFZp434E026; n=1; Homo sapiens|Rep: Putative
uncharacterized protein DKFZp434E026 - Homo sapiens
(Human)
Length = 158
Score = 37.1 bits (82), Expect = 0.57
Identities = 17/34 (50%), Positives = 20/34 (58%)
Frame = -2
Query: 520 SLNERWDASSSNGCCQGRSPLSEVDATVPAPPGL 419
+L +W S+G C G SPLS A PAPPGL
Sbjct: 106 ALPGKWHLLLSSGLCGGNSPLSGNGAVCPAPPGL 139
>UniRef50_UPI00015B4B32 Cluster: PREDICTED: hypothetical protein;
n=1; Nasonia vitripennis|Rep: PREDICTED: hypothetical
protein - Nasonia vitripennis
Length = 1628
Score = 35.5 bits (78), Expect = 1.7
Identities = 14/27 (51%), Positives = 16/27 (59%), Gaps = 1/27 (3%)
Frame = -1
Query: 380 RRHPDRTYGYHHHGHAEFGQQHVR-YP 303
R PD +G+HHHGH G HV YP
Sbjct: 181 RGAPDTRHGHHHHGHHNHGHHHVEPYP 207
>UniRef50_Q5NB71 Cluster: Putative uncharacterized protein
P0431F01.18; n=1; Oryza sativa (japonica
cultivar-group)|Rep: Putative uncharacterized protein
P0431F01.18 - Oryza sativa subsp. japonica (Rice)
Length = 320
Score = 35.5 bits (78), Expect = 1.7
Identities = 15/26 (57%), Positives = 16/26 (61%)
Frame = +2
Query: 323 ARIPRVRGGGTHRSGQGAFGNMCRGG 400
AR PR GGG HR GA G + RGG
Sbjct: 201 ARRPRAAGGGKHRGAHGANGGVARGG 226
>UniRef50_Q2S0X7 Cluster: Sensor protein; n=1; Salinibacter ruber
DSM 13855|Rep: Sensor protein - Salinibacter ruber
(strain DSM 13855)
Length = 942
Score = 35.1 bits (77), Expect = 2.3
Identities = 22/63 (34%), Positives = 35/63 (55%)
Frame = +3
Query: 426 GGAGTVASTSDSGERPWQQPLLLLASQRSFRLEDTLLKRFPSFPWL*PTKSRRSTRPNRL 605
GG GTV +T +G RP PL+LLAS + + +T+L + + W+ T + R L
Sbjct: 146 GGGGTVLATL-TGPRPETSPLILLASMGTIAVVETVLTQ--GWLWIRKTVREQEARLQGL 202
Query: 606 SSS 614
++S
Sbjct: 203 TNS 205
>UniRef50_A6NR78 Cluster: Putative uncharacterized protein; n=1;
Bacteroides capillosus ATCC 29799|Rep: Putative
uncharacterized protein - Bacteroides capillosus ATCC
29799
Length = 448
Score = 34.7 bits (76), Expect = 3.0
Identities = 11/24 (45%), Positives = 15/24 (62%)
Frame = -1
Query: 395 HDTCYRRHPDRTYGYHHHGHAEFG 324
HD C+ H + +G+HHH HA G
Sbjct: 109 HDHCHEHHHEHEHGHHHHHHASPG 132
>UniRef50_A4QZ10 Cluster: Predicted protein; n=2; Magnaporthe
grisea|Rep: Predicted protein - Magnaporthe grisea (Rice
blast fungus) (Pyricularia grisea)
Length = 161
Score = 34.3 bits (75), Expect = 4.0
Identities = 13/38 (34%), Positives = 19/38 (50%)
Frame = -1
Query: 407 TYVHHDTCYRRHPDRTYGYHHHGHAEFGQQHVRYPMIR 294
+Y H + RH R+YG+ HH H + R P +R
Sbjct: 90 SYYHQEVSPGRHRSRSYGHRHHHHHRHSRSRSRGPDVR 127
>UniRef50_UPI000058888F Cluster: PREDICTED: similar to
ENSANGP00000014064; n=1; Strongylocentrotus
purpuratus|Rep: PREDICTED: similar to ENSANGP00000014064
- Strongylocentrotus purpuratus
Length = 300
Score = 33.9 bits (74), Expect = 5.3
Identities = 11/27 (40%), Positives = 15/27 (55%)
Frame = -1
Query: 395 HDTCYRRHPDRTYGYHHHGHAEFGQQH 315
H+ YR H + +HHHGH+ G H
Sbjct: 106 HERAYRPHSNSDGHHHHHGHSHHGHSH 132
>UniRef50_A3C3B6 Cluster: Putative uncharacterized protein; n=3;
Oryza sativa (japonica cultivar-group)|Rep: Putative
uncharacterized protein - Oryza sativa subsp. japonica
(Rice)
Length = 150
Score = 33.9 bits (74), Expect = 5.3
Identities = 17/37 (45%), Positives = 19/37 (51%)
Frame = +2
Query: 293 AESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGR 403
A+SW TGRA A + R R GG R A N G R
Sbjct: 36 AQSWATGRAAAELGRGRKGGRRRGLAQAAANSGEGNR 72
>UniRef50_Q6PEV8 Cluster: Uncharacterized protein CXorf39; n=19;
Euteleostomi|Rep: Uncharacterized protein CXorf39 - Homo
sapiens (Human)
Length = 388
Score = 33.9 bits (74), Expect = 5.3
Identities = 21/73 (28%), Positives = 37/73 (50%), Gaps = 8/73 (10%)
Frame = -2
Query: 613 EDDSLFGLVDLLDFVGYNQGKLGNLFNNVSSSLNERWDASSS--------NGCCQGRSPL 458
+ D + L+D DF ++ G++ ++VSSS++ WD S S + G L
Sbjct: 93 DQDDCYSLLDDQDFTSFDLFPEGSVCSDVSSSISTYWDWSDSEFEWQLPGSDIASGSDVL 152
Query: 457 SEVDATVPAPPGL 419
S+V ++P+ P L
Sbjct: 153 SDVIPSIPSSPCL 165
>UniRef50_Q52PH1 Cluster: Golden2-like transcription factor; n=8;
Poaceae|Rep: Golden2-like transcription factor - Zea
mays (Maize)
Length = 469
Score = 33.5 bits (73), Expect = 7.0
Identities = 11/19 (57%), Positives = 14/19 (73%)
Frame = -3
Query: 396 PRHMLPKAP*PDLWVPPPR 340
PRH+ P+AP P W PPP+
Sbjct: 325 PRHLAPRAPPPPPWAPPPQ 343
>UniRef50_UPI0000F212F9 Cluster: PREDICTED: hypothetical protein;
n=1; Danio rerio|Rep: PREDICTED: hypothetical protein -
Danio rerio
Length = 194
Score = 33.1 bits (72), Expect = 9.2
Identities = 12/27 (44%), Positives = 15/27 (55%)
Frame = -1
Query: 398 HHDTCYRRHPDRTYGYHHHGHAEFGQQ 318
HH + RH DR +G HHHG G +
Sbjct: 132 HHTRHHTRHHDRHHGRHHHGRHHHGHR 158
>UniRef50_A7SGS6 Cluster: Predicted protein; n=1; Nematostella
vectensis|Rep: Predicted protein - Nematostella
vectensis
Length = 263
Score = 33.1 bits (72), Expect = 9.2
Identities = 14/45 (31%), Positives = 24/45 (53%)
Frame = -1
Query: 407 TYVHHDTCYRRHPDRTYGYHHHGHAEFGQQHVRYPMIRHWFGDQP 273
TY+ H Y +HP T+ YHH H + ++ ++P + H + P
Sbjct: 114 TYLTHR--YHQHPQVTHRYHHQ-HPQVTHRYHQHPQVTHRYHQHP 155
>UniRef50_A2DPP4 Cluster: Phosphatidylinositol 3-and 4-kinase family
protein; n=1; Trichomonas vaginalis G3|Rep:
Phosphatidylinositol 3-and 4-kinase family protein -
Trichomonas vaginalis G3
Length = 2286
Score = 33.1 bits (72), Expect = 9.2
Identities = 21/67 (31%), Positives = 34/67 (50%), Gaps = 1/67 (1%)
Frame = -2
Query: 757 SQTLIXXXNYEGSLTLDTTTVAHFTLTSTKTLRLVHLKDIRPCLEAPQE-DDSLFGLVDL 581
SQ LI Y L ++ F TS+ + V LK + C Q+ + S++ ++DL
Sbjct: 1065 SQKLIIDSEYLRGKILPIAFLSCFLNTSSDQ-KEVFLKQLNDCFSLGQKINSSIYKIIDL 1123
Query: 580 LDFVGYN 560
L+ +GYN
Sbjct: 1124 LEMLGYN 1130
>UniRef50_P04196 Cluster: Histidine-rich glycoprotein precursor;
n=19; Eutheria|Rep: Histidine-rich glycoprotein
precursor - Homo sapiens (Human)
Length = 525
Score = 33.1 bits (72), Expect = 9.2
Identities = 19/46 (41%), Positives = 24/46 (52%), Gaps = 3/46 (6%)
Frame = -1
Query: 395 HDTCYRRHPD--RTYGYHHHGHAEFGQQ-HVRYPMIRHWFGDQPPC 267
HDT +R+HP +G+H HGH G H +P H F D PC
Sbjct: 374 HDT-HRQHPHGHHPHGHHPHGHHPHGHHPHGHHPHC-HDFQDYGPC 417
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 810,826,711
Number of Sequences: 1657284
Number of extensions: 16712101
Number of successful extensions: 54173
Number of sequences better than 10.0: 52
Number of HSP's better than 10.0 without gapping: 50074
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 53769
length of database: 575,637,011
effective HSP length: 100
effective length of database: 409,908,611
effective search space used: 75833093035
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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