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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= 030623sawa_B12_e90_04.seq
         (1494 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q8MZI3 Cluster: GH10652p; n=2; Drosophila melanogaster|...   369   e-100
UniRef50_P19109 Cluster: ATP-dependent RNA helicase p62; n=9; Eu...   368   e-100
UniRef50_Q17JB5 Cluster: DEAD box ATP-dependent RNA helicase; n=...   347   3e-94
UniRef50_Q17KA8 Cluster: DEAD box ATP-dependent RNA helicase; n=...   346   1e-93
UniRef50_Q16XX4 Cluster: DEAD box ATP-dependent RNA helicase; n=...   339   9e-92
UniRef50_Q17II7 Cluster: DEAD box ATP-dependent RNA helicase; n=...   331   2e-89
UniRef50_Q4IF76 Cluster: ATP-dependent RNA helicase DBP2; n=4; F...   309   1e-82
UniRef50_Q5N7W4 Cluster: DEAD-box ATP-dependent RNA helicase 30;...   290   5e-77
UniRef50_Q5CNJ7 Cluster: Similar to RNA-dependent helicase p68; ...   276   1e-72
UniRef50_Q4N215 Cluster: RNA helicase, putative; n=3; Aconoidasi...   267   4e-70
UniRef50_Q8SRB2 Cluster: ATP-dependent RNA helicase DBP2; n=103;...   260   5e-68
UniRef50_Q24I45 Cluster: DEAD/DEAH box helicase family protein; ...   256   1e-66
UniRef50_UPI00006CD03A Cluster: P68-like protein, putative; n=1;...   253   8e-66
UniRef50_Q8IL14 Cluster: Helicase, truncated, putative; n=3; Euk...   253   1e-65
UniRef50_A2EVI2 Cluster: DEAD/DEAH box helicase family protein; ...   246   9e-64
UniRef50_Q4QIQ9 Cluster: ATP-dependent DEAD/H RNA helicase, puta...   244   4e-63
UniRef50_UPI00004988F8 Cluster: DEAD/DEAH box helicase; n=1; Ent...   242   1e-62
UniRef50_Q26696 Cluster: Putative DEAD-box RNA helicase HEL64; n...   242   1e-62
UniRef50_Q5VQL1-2 Cluster: Isoform 2 of Q5VQL1 ; n=2; Magnolioph...   239   1e-61
UniRef50_Q9SWV9 Cluster: Ethylene-responsive RNA helicase; n=5; ...   235   2e-60
UniRef50_A2WLP5 Cluster: Putative uncharacterized protein; n=3; ...   235   3e-60
UniRef50_Q5JKF2 Cluster: DEAD-box ATP-dependent RNA helicase 40;...   231   3e-59
UniRef50_Q7QA96 Cluster: ENSANGP00000013118; n=5; Eumetazoa|Rep:...   230   8e-59
UniRef50_Q9SQV1 Cluster: Probable DEAD-box ATP-dependent RNA hel...   229   1e-58
UniRef50_Q9LYJ9 Cluster: DEAD-box ATP-dependent RNA helicase 46;...   225   2e-57
UniRef50_Q4MYL1 Cluster: ATP-dependent RNA helicase, putative; n...   225   3e-57
UniRef50_A2ED04 Cluster: DEAD/DEAH box helicase family protein; ...   222   2e-56
UniRef50_A4S3A0 Cluster: Predicted protein; n=2; Ostreococcus|Re...   222   2e-56
UniRef50_Q9LKL6 Cluster: DEAD box protein P68; n=5; Viridiplanta...   217   5e-55
UniRef50_Q9P7C7 Cluster: Pre-mRNA-processing ATP-dependent RNA h...   217   6e-55
UniRef50_A7RY08 Cluster: Predicted protein; n=2; Eukaryota|Rep: ...   216   1e-54
UniRef50_A0C015 Cluster: Chromosome undetermined scaffold_14, wh...   216   1e-54
UniRef50_O22907 Cluster: DEAD-box ATP-dependent RNA helicase 24;...   215   2e-54
UniRef50_Q16T16 Cluster: DEAD box ATP-dependent RNA helicase; n=...   215   3e-54
UniRef50_Q4IP34 Cluster: Pre-mRNA-processing ATP-dependent RNA h...   213   1e-53
UniRef50_Q86XP3 Cluster: ATP-dependent RNA helicase DDX42; n=47;...   212   2e-53
UniRef50_A0CUL6 Cluster: Chromosome undetermined scaffold_28, wh...   212   2e-53
UniRef50_A6RW79 Cluster: Putative uncharacterized protein; n=1; ...   210   5e-53
UniRef50_Q965K2 Cluster: Putative uncharacterized protein; n=2; ...   208   3e-52
UniRef50_Q6BML1 Cluster: Pre-mRNA-processing ATP-dependent RNA h...   208   3e-52
UniRef50_Q9SF41 Cluster: DEAD-box ATP-dependent RNA helicase 45;...   208   4e-52
UniRef50_Q7K4L8 Cluster: LD33749p; n=1; Drosophila melanogaster|...   207   7e-52
UniRef50_Q8H0U8 Cluster: DEAD-box ATP-dependent RNA helicase 42;...   205   2e-51
UniRef50_UPI00015609AE Cluster: PREDICTED: similar to DEAD (Asp-...   204   5e-51
UniRef50_Q4PFD9 Cluster: Pre-mRNA-processing ATP-dependent RNA h...   203   8e-51
UniRef50_Q6BG49 Cluster: RNA helicase, putative; n=1; Paramecium...   202   2e-50
UniRef50_Q9NXZ2 Cluster: Probable ATP-dependent RNA helicase DDX...   201   4e-50
UniRef50_Q93382 Cluster: Putative uncharacterized protein; n=2; ...   200   6e-50
UniRef50_Q012E3 Cluster: DEAD-box protein abstrakt; n=1; Ostreoc...   200   1e-49
UniRef50_Q54CB8 Cluster: Putative uncharacterized protein; n=1; ...   200   1e-49
UniRef50_A0BDD2 Cluster: Chromosome undetermined scaffold_100, w...   199   1e-49
UniRef50_Q9VXW2 Cluster: CG6227-PA; n=11; Coelomata|Rep: CG6227-...   199   2e-49
UniRef50_A4S294 Cluster: Predicted protein; n=1; Ostreococcus lu...   198   4e-49
UniRef50_Q54T87 Cluster: Putative uncharacterized protein; n=1; ...   194   5e-48
UniRef50_Q4UBP8 Cluster: RNA helicase, putative; n=4; Eukaryota|...   193   9e-48
UniRef50_Q9C551 Cluster: DEAD-box ATP-dependent RNA helicase 5; ...   193   1e-47
UniRef50_UPI00006CDDA3 Cluster: CLN3 protein; n=1; Tetrahymena t...   191   5e-47
UniRef50_A5E058 Cluster: Pre-mRNA-processing ATP-dependent RNA h...   190   6e-47
UniRef50_A4S107 Cluster: Predicted protein; n=1; Ostreococcus lu...   190   8e-47
UniRef50_Q869K2 Cluster: Similar to Dictyostelium discoideum (Sl...   190   1e-46
UniRef50_Q9M2F9 Cluster: DEAD-box ATP-dependent RNA helicase 52;...   190   1e-46
UniRef50_Q4JF01 Cluster: Vasa homlogue; n=2; Eukaryota|Rep: Vasa...   189   2e-46
UniRef50_A7AWZ5 Cluster: DEAD/DEAH box helicase and helicase con...   186   1e-45
UniRef50_O00571 Cluster: ATP-dependent RNA helicase DDX3X; n=74;...   185   2e-45
UniRef50_UPI00004994C0 Cluster: DEAD/DEAH box helicase; n=2; Ent...   184   4e-45
UniRef50_UPI000065DC0B Cluster: Probable ATP-dependent RNA helic...   184   4e-45
UniRef50_A5KB15 Cluster: ATP-dependent RNA helicase, putative; n...   184   7e-45
UniRef50_P20447 Cluster: ATP-dependent RNA helicase DBP3; n=20; ...   183   9e-45
UniRef50_UPI00006CF9CE Cluster: DEAD/DEAH box helicase family pr...   183   1e-44
UniRef50_Q0UN57 Cluster: Pre-mRNA-processing ATP-dependent RNA h...   182   2e-44
UniRef50_Q5KME7 Cluster: Pre-mRNA-processing ATP-dependent RNA h...   182   3e-44
UniRef50_Q9XVZ6 Cluster: Putative uncharacterized protein; n=2; ...   180   7e-44
UniRef50_O97032 Cluster: DjVLGB; n=2; Dugesia|Rep: DjVLGB - Duge...   180   1e-43
UniRef50_Q9VHP0 Cluster: ATP-dependent RNA helicase bel; n=4; Pr...   178   3e-43
UniRef50_Q5KHB7 Cluster: ATP-dependent RNA helicase DBP3; n=2; F...   177   5e-43
UniRef50_UPI00004992E6 Cluster: DEAD/DEAH box helicase; n=3; Ent...   177   8e-43
UniRef50_Q1AG34 Cluster: Ded1-like DEAD-box RNA helicase; n=1; C...   177   8e-43
UniRef50_A0BDT5 Cluster: Chromosome undetermined scaffold_101, w...   177   8e-43
UniRef50_Q4Z5Q6 Cluster: ATP-dependent RNA helicase, putative; n...   176   1e-42
UniRef50_A0EA02 Cluster: Chromosome undetermined scaffold_85, wh...   176   1e-42
UniRef50_Q8I416 Cluster: ATP-dependent RNA helicase, putative; n...   176   1e-42
UniRef50_A0D315 Cluster: Chromosome undetermined scaffold_36, wh...   176   1e-42
UniRef50_A7TJK8 Cluster: Putative uncharacterized protein; n=1; ...   176   1e-42
UniRef50_O97031 Cluster: DjVLGA; n=1; Dugesia japonica|Rep: DjVL...   175   2e-42
UniRef50_Q00T47 Cluster: Putative RNA helicase, DRH1; n=1; Ostre...   175   2e-42
UniRef50_P21372 Cluster: Pre-mRNA-processing ATP-dependent RNA h...   175   2e-42
UniRef50_Q4PDT1 Cluster: ATP-dependent RNA helicase DBP3; n=1; U...   175   2e-42
UniRef50_Q65XX1 Cluster: Vasa-and belle-like helicase protein 1,...   175   3e-42
UniRef50_Q0FAJ4 Cluster: Dead-box ATP-dependent RNA helicase; n=...   174   4e-42
UniRef50_Q5CP59 Cluster: DEAD box polypeptide, Y chromosome-rela...   173   1e-41
UniRef50_Q754U8 Cluster: Pre-mRNA-processing ATP-dependent RNA h...   173   1e-41
UniRef50_P24784 Cluster: ATP-dependent RNA helicase DBP1; n=103;...   170   7e-41
UniRef50_Q10202 Cluster: ATP-dependent RNA helicase dbp3; n=1; S...   169   2e-40
UniRef50_A2DES1 Cluster: DEAD/DEAH box helicase family protein; ...   169   2e-40
UniRef50_Q388E8 Cluster: ATP-dependent DEAD/H RNA helicase, puta...   168   4e-40
UniRef50_P93008 Cluster: DEAD-box ATP-dependent RNA helicase 21;...   168   4e-40
UniRef50_UPI0000F3242A Cluster: Probable ATP-dependent RNA helic...   167   5e-40
UniRef50_A2DH37 Cluster: DEAD/DEAH box helicase family protein; ...   167   5e-40
UniRef50_Q6FML5 Cluster: Pre-mRNA-processing ATP-dependent RNA h...   167   5e-40
UniRef50_Q9BUQ8 Cluster: Probable ATP-dependent RNA helicase DDX...   167   5e-40
UniRef50_A0D361 Cluster: Chromosome undetermined scaffold_36, wh...   167   7e-40
UniRef50_A2G6R5 Cluster: DEAD/DEAH box helicase family protein; ...   166   1e-39
UniRef50_Q01PH0 Cluster: DEAD/DEAH box helicase domain protein; ...   165   3e-39
UniRef50_A3FQ46 Cluster: U5 snRNP 100 kD protein, putative; n=2;...   164   5e-39
UniRef50_Q66WQ1 Cluster: DEAD box DNA helicase; n=2; Plasmodium ...   163   1e-38
UniRef50_Q95QN2 Cluster: Putative uncharacterized protein; n=2; ...   162   2e-38
UniRef50_Q8YH70 Cluster: ATP-DEPENDENT RNA HELICASE RHLE; n=10; ...   161   4e-38
UniRef50_Q9Y7T7 Cluster: Pre-mRNA-splicing ATP-dependent RNA hel...   161   6e-38
UniRef50_A7HG33 Cluster: DEAD/DEAH box helicase domain protein; ...   159   1e-37
UniRef50_Q9N5K1 Cluster: Putative uncharacterized protein; n=2; ...   159   1e-37
UniRef50_A7RGX3 Cluster: Predicted protein; n=3; Eukaryota|Rep: ...   159   2e-37
UniRef50_P09052 Cluster: ATP-dependent RNA helicase vasa; n=5; E...   159   2e-37
UniRef50_Q7S5R1 Cluster: ATP-dependent RNA helicase dbp-3; n=10;...   159   2e-37
UniRef50_A5K071 Cluster: ATP-dependent RNA helicase, putative; n...   158   3e-37
UniRef50_Q9V3C0 Cluster: ATP-dependent RNA helicase abstrakt; n=...   158   4e-37
UniRef50_A5BHG9 Cluster: Putative uncharacterized protein; n=1; ...   157   5e-37
UniRef50_A3ZXX1 Cluster: ATP-dependent RNA helicase; n=2; Planct...   157   7e-37
UniRef50_A7SE71 Cluster: Predicted protein; n=1; Nematostella ve...   157   7e-37
UniRef50_Q9LU46 Cluster: DEAD-box ATP-dependent RNA helicase 35;...   157   7e-37
UniRef50_Q9GNP1 Cluster: Vasa homolog; n=18; Eumetazoa|Rep: Vasa...   157   9e-37
UniRef50_Q4JG17 Cluster: Vasa-like protein; n=1; Litopenaeus van...   157   9e-37
UniRef50_Q9GV13 Cluster: Vasa-related protein CnVAS1; n=3; Eumet...   156   1e-36
UniRef50_Q0E3X4 Cluster: DEAD-box ATP-dependent RNA helicase 35A...   156   1e-36
UniRef50_UPI00015B4D1B Cluster: PREDICTED: similar to DEAD box A...   156   2e-36
UniRef50_A5G1U8 Cluster: DEAD/DEAH box helicase domain protein; ...   155   4e-36
UniRef50_Q62IF8 Cluster: ATP-dependent RNA helicase RhlE; n=59; ...   154   7e-36
UniRef50_Q5NML9 Cluster: DNA and RNA helicase; n=28; Alphaproteo...   154   7e-36
UniRef50_A7U5X1 Cluster: DEAD-box helicase 11; n=11; Plasmodium|...   153   2e-35
UniRef50_UPI00015B61D8 Cluster: PREDICTED: similar to vasa-like ...   152   2e-35
UniRef50_Q82T78 Cluster: RhlE; ATP-dependent RNA helicase RhlE; ...   152   2e-35
UniRef50_Q4W7T8 Cluster: VASA RNA helicase; n=1; Artemia francis...   152   2e-35
UniRef50_Q6CCZ1 Cluster: Pre-mRNA-processing ATP-dependent RNA h...   152   2e-35
UniRef50_Q5NN72 Cluster: DNA and RNA helicase; n=3; Sphingomonad...   152   3e-35
UniRef50_Q8I0W7 Cluster: Snrnp protein, putative; n=6; Plasmodiu...   152   3e-35
UniRef50_Q013X8 Cluster: DEAD/DEAH box RNA helicase; n=1; Ostreo...   151   5e-35
UniRef50_Q54Y81 Cluster: Putative RNA helicase; n=2; Dictyosteli...   151   5e-35
UniRef50_Q5FS73 Cluster: ATP-dependent RNA helicase; n=2; Glucon...   151   6e-35
UniRef50_Q2BP56 Cluster: Putative ATP-dependent RNA helicase; n=...   150   8e-35
UniRef50_Q0M1B5 Cluster: Helicase-like:DEAD/DEAH box helicase-li...   150   8e-35
UniRef50_A6CFZ8 Cluster: ATP-dependent RNA helicase; n=1; Planct...   150   8e-35
UniRef50_Q6T442 Cluster: Hel61; n=4; Leishmania|Rep: Hel61 - Lei...   150   8e-35
UniRef50_Q1DMX8 Cluster: Pre-mRNA-splicing ATP-dependent RNA hel...   150   8e-35
UniRef50_Q4QIG1 Cluster: ATP-dependent DEAD/H RNA helicase, puta...   150   1e-34
UniRef50_A2D755 Cluster: DEAD/DEAH box helicase family protein; ...   150   1e-34
UniRef50_Q4P7Y2 Cluster: Putative uncharacterized protein; n=1; ...   150   1e-34
UniRef50_A4RK80 Cluster: Pre-mRNA-splicing ATP-dependent RNA hel...   150   1e-34
UniRef50_A5K9H3 Cluster: Pre-mRNA splicing factor RNA helicase P...   149   1e-34
UniRef50_Q87HW1 Cluster: ATP-dependent RNA helicase, DEAD box fa...   149   2e-34
UniRef50_A3WD13 Cluster: DNA and RNA helicase; n=2; Alphaproteob...   149   2e-34
UniRef50_A1KUM8 Cluster: Putative ATP-dependent RNA helicase; n=...   149   2e-34
UniRef50_Q3ZDP1 Cluster: Vasa-like protein; n=7; Neoptera|Rep: V...   149   2e-34
UniRef50_Q384E1 Cluster: Mitochondrial DEAD box protein; n=5; Tr...   149   2e-34
UniRef50_Q9FZ92 Cluster: Putative DEAD-box ATP-dependent RNA hel...   149   2e-34
UniRef50_A6PQ62 Cluster: DEAD/DEAH box helicase domain protein; ...   149   2e-34
UniRef50_A5UZK3 Cluster: DEAD/DEAH box helicase domain protein; ...   149   2e-34
UniRef50_Q44NG9 Cluster: Helicase, C-terminal:DEAD/DEAH box heli...   148   4e-34
UniRef50_Q0RTL3 Cluster: Cold-shock DeaD box ATP-dependent RNA h...   148   4e-34
UniRef50_Q9NQI0 Cluster: Probable ATP-dependent RNA helicase DDX...   148   4e-34
UniRef50_Q67NW1 Cluster: ATP-dependent RNA helicase; n=5; Firmic...   147   6e-34
UniRef50_A6DIU5 Cluster: Probable ATP dependent RNA helicase; n=...   147   6e-34
UniRef50_Q8D7D0 Cluster: Superfamily II DNA and RNA helicase; n=...   147   7e-34
UniRef50_Q480Z7 Cluster: ATP-dependent RNA helicase, DEAD box fa...   146   1e-33
UniRef50_Q9GV12 Cluster: Vasa-related protein CnVAS2; n=14; Eume...   146   1e-33
UniRef50_A2EPC6 Cluster: Type III restriction enzyme, res subuni...   146   1e-33
UniRef50_Q9P9G7 Cluster: DEAD-box RNA helicase; n=3; Methanosarc...   146   1e-33
UniRef50_Q0G0P8 Cluster: Superfamily II DNA and RNA helicase; n=...   146   1e-33
UniRef50_A7CUH7 Cluster: DEAD/DEAH box helicase domain protein; ...   146   1e-33
UniRef50_Q4UE18 Cluster: RNA helicase, putative; n=2; Theileria|...   146   1e-33
UniRef50_A6DHU9 Cluster: DEAD/DEAH box helicase-like protein; n=...   146   2e-33
UniRef50_Q89UH0 Cluster: Dead-box ATP-dependent RNA helicase; n=...   145   2e-33
UniRef50_Q3AZR1 Cluster: DEAD/DEAH box helicase-like; n=2; Synec...   145   2e-33
UniRef50_A1XCP2 Cluster: Vasa-like protein; n=2; Coelomata|Rep: ...   145   2e-33
UniRef50_P25888 Cluster: Putative ATP-dependent RNA helicase rhl...   145   3e-33
UniRef50_Q5FUQ9 Cluster: ATP-dependent RNA helicase; n=11; cellu...   144   4e-33
UniRef50_Q7MT81 Cluster: ATP-dependent RNA helicase, DEAD/DEAH b...   144   5e-33
UniRef50_A3EUK2 Cluster: Superfamily II DNA and RNA helicase; n=...   144   5e-33
UniRef50_A0C369 Cluster: Chromosome undetermined scaffold_146, w...   144   5e-33
UniRef50_Q18W60 Cluster: DEAD/DEAH box helicase-like; n=2; Desul...   144   7e-33
UniRef50_O07897 Cluster: Heat resistant RNA dependent ATPase; n=...   144   7e-33
UniRef50_Q4W7T7 Cluster: VASA RNA helicase; n=3; Daphniidae|Rep:...   144   7e-33
UniRef50_A0RUV7 Cluster: Superfamily II helicase; n=3; Thermopro...   144   7e-33
UniRef50_Q9LUW5 Cluster: DEAD-box ATP-dependent RNA helicase 53;...   144   7e-33
UniRef50_Q6C024 Cluster: Pre-mRNA-splicing ATP-dependent RNA hel...   144   7e-33
UniRef50_Q8YXJ0 Cluster: ATP-dependent RNA helicase; n=11; Cyano...   143   9e-33
UniRef50_Q6APU7 Cluster: Related to ATP-dependent RNA helicase; ...   143   9e-33
UniRef50_A4V6K8 Cluster: Putative RNA helicase protein; n=1; Dug...   143   9e-33
UniRef50_Q0HYG8 Cluster: DEAD/DEAH box helicase domain protein; ...   143   1e-32
UniRef50_Q3SF48 Cluster: DEAD/DEAH box helicase; n=6; cellular o...   142   2e-32
UniRef50_Q1J0S9 Cluster: DEAD/DEAH box helicase-like protein; n=...   142   2e-32
UniRef50_A6GPV2 Cluster: Helicase; n=1; Limnobacter sp. MED105|R...   142   2e-32
UniRef50_Q8F0Q7 Cluster: ATP-dependent RNA helicase; n=4; Leptos...   142   2e-32
UniRef50_A7HKQ8 Cluster: DEAD/DEAH box helicase domain protein; ...   142   3e-32
UniRef50_Q240I5 Cluster: DEAD/DEAH box helicase family protein; ...   142   3e-32
UniRef50_Q6FM43 Cluster: Pre-mRNA-splicing ATP-dependent RNA hel...   142   3e-32
UniRef50_A3ZWP8 Cluster: ATP-dependent RNA helicase; n=1; Blasto...   141   4e-32
UniRef50_A0Z0M4 Cluster: ATP-dependent RNA helicase; n=1; marine...   141   4e-32
UniRef50_A0KXT6 Cluster: DEAD/DEAH box helicase domain protein; ...   141   4e-32
UniRef50_A0KTC9 Cluster: DEAD/DEAH box helicase domain protein; ...   141   4e-32
UniRef50_A3AD37 Cluster: Putative uncharacterized protein; n=2; ...   141   4e-32
UniRef50_Q012T2 Cluster: DEAD-box protein abstrakt; n=3; Ostreoc...   141   5e-32
UniRef50_Q2BMZ1 Cluster: ATP-dependent RNA helicase; n=1; Neptun...   140   6e-32
UniRef50_Q1IMK6 Cluster: DEAD/DEAH box helicase-like; n=1; Acido...   140   6e-32
UniRef50_Q0S0C5 Cluster: Possible ATP-dependent RNA helicase; n=...   140   6e-32
UniRef50_A6TTG0 Cluster: DEAD/DEAH box helicase domain protein; ...   140   6e-32
UniRef50_A5FST0 Cluster: DEAD/DEAH box helicase domain protein; ...   140   6e-32
UniRef50_A4EAF2 Cluster: Putative uncharacterized protein; n=1; ...   140   6e-32
UniRef50_A0VLH7 Cluster: DEAD/DEAH box helicase domain protein; ...   140   6e-32
UniRef50_Q6MN67 Cluster: ATP-dependent RNA helicase; n=3; Deltap...   140   9e-32
UniRef50_Q4UA43 Cluster: DEAD-family helicase, putative; n=3; Pi...   140   9e-32
UniRef50_Q64VR8 Cluster: ATP-dependent RNA helicase DeaD; n=14; ...   140   1e-31
UniRef50_Q12QV2 Cluster: DEAD/DEAH box helicase-like protein; n=...   140   1e-31
UniRef50_A0RP33 Cluster: Putative ATP-dependent RNA helicase Rhl...   140   1e-31
UniRef50_Q9PA24 Cluster: ATP-dependent RNA helicase rhlB; n=87; ...   140   1e-31
UniRef50_Q1MY97 Cluster: DEAD/DEAH box helicase-like protein; n=...   139   1e-31
UniRef50_Q0LVA0 Cluster: Helicase-like:DEAD/DEAH box helicase-li...   139   1e-31
UniRef50_A7CSF3 Cluster: DEAD/DEAH box helicase domain protein; ...   139   1e-31
UniRef50_Q5ENJ0 Cluster: Chloroplast RNA helicase; n=1; Heteroca...   139   1e-31
UniRef50_Q89M45 Cluster: ATP-dependent RNA helicase; n=29; cellu...   139   2e-31
UniRef50_A4RW46 Cluster: Predicted protein; n=2; Ostreococcus|Re...   139   2e-31
UniRef50_Q1GJ43 Cluster: DEAD/DEAH box helicase-like protein; n=...   138   3e-31
UniRef50_Q11UI8 Cluster: DEAD box-related helicase; n=3; Sphingo...   138   3e-31
UniRef50_A6NQG8 Cluster: Putative uncharacterized protein; n=2; ...   138   3e-31
UniRef50_Q8L7S8 Cluster: DEAD-box ATP-dependent RNA helicase 3; ...   138   3e-31
UniRef50_Q5KNF8 Cluster: Pre-mRNA-splicing ATP-dependent RNA hel...   138   3e-31
UniRef50_Q0AVQ9 Cluster: ATP-dependent RNA helicase; n=1; Syntro...   138   3e-31
UniRef50_Q81JK1 Cluster: ATP-dependent RNA helicase, DEAD/DEAH b...   138   5e-31
UniRef50_Q3AX69 Cluster: DEAD/DEAH box helicase-like; n=15; Cyan...   138   5e-31
UniRef50_A6W6A7 Cluster: DEAD/DEAH box helicase domain protein; ...   138   5e-31
UniRef50_Q54CD6 Cluster: Putative uncharacterized protein; n=1; ...   138   5e-31
UniRef50_Q8XKJ8 Cluster: ATP-dependent RNA helicase; n=12; Clost...   137   6e-31
UniRef50_Q08Q14 Cluster: HeliCase, c-terminal:dead/deah box heli...   137   6e-31
UniRef50_P42305 Cluster: ATP-dependent RNA helicase dbpA; n=9; F...   137   6e-31
UniRef50_Q7UNV7 Cluster: ATP-dependent RNA helicase; n=2; Planct...   137   8e-31
UniRef50_Q31AC4 Cluster: DEAD/DEAH box helicase-like protein; n=...   137   8e-31
UniRef50_Q0S0C7 Cluster: ATP-dependent RNA helicase; n=5; Actino...   137   8e-31
UniRef50_Q2PZC2 Cluster: Vasa protein; n=3; Apidae|Rep: Vasa pro...   137   8e-31
UniRef50_Q978T9 Cluster: ATP-dependent RNA helicase; n=3; Thermo...   137   8e-31
UniRef50_Q9PGP6 Cluster: ATP-dependent RNA helicase; n=10; cellu...   136   1e-30
UniRef50_Q6MR64 Cluster: ATP-dependent RNA helicase; n=5; cellul...   136   1e-30
UniRef50_Q11TW3 Cluster: Possible ATP-dependent RNA helicase; n=...   136   1e-30
UniRef50_A1USG3 Cluster: DEAD/DEAH box helicase domain/helicase ...   136   1e-30
UniRef50_Q185X0 Cluster: ATP-dependent RNA helicase; n=3; Clostr...   136   1e-30
UniRef50_Q0BSI7 Cluster: ATP-dependent RNA helicase; n=12; Alpha...   136   1e-30
UniRef50_A7JLA3 Cluster: ATP-dependent RNA helicase; n=20; Franc...   136   1e-30
UniRef50_Q11WD3 Cluster: Possible ATP-dependent RNA helicase; n=...   136   2e-30
UniRef50_A2E9Y0 Cluster: DEAD/DEAH box helicase family protein; ...   136   2e-30
UniRef50_O54116 Cluster: Probable DEAD-box RNA helicase; n=10; S...   135   2e-30
UniRef50_UPI0000DAE40A Cluster: hypothetical protein Rgryl_01000...   135   3e-30
UniRef50_Q0BUS0 Cluster: ATP-dependent RNA helicase; n=3; Rhodos...   135   3e-30
UniRef50_A6VTY7 Cluster: DEAD/DEAH box helicase domain protein; ...   135   3e-30
UniRef50_Q9KAA6 Cluster: ATP-dependent RNA helicase; n=5; Firmic...   134   4e-30
UniRef50_Q5GRS8 Cluster: Superfamily II DNA/RNA helicase; n=4; W...   134   4e-30
UniRef50_A6QC93 Cluster: ATP-independent RNA helicase DbpA; n=1;...   134   4e-30
UniRef50_A2U4F0 Cluster: Putative ATP-dependent RNA helicase; n=...   134   4e-30
UniRef50_Q015I7 Cluster: ATP-dependent RNA helicase; n=2; Ostreo...   134   4e-30
UniRef50_Q54DV7 Cluster: Putative uncharacterized protein; n=1; ...   134   4e-30
UniRef50_Q484Q1 Cluster: RNA helicase DeaD; n=1; Colwellia psych...   134   6e-30
UniRef50_Q2YZZ9 Cluster: Putative uncharacterized protein; n=1; ...   134   6e-30
UniRef50_Q12B10 Cluster: DEAD/DEAH box helicase-like; n=13; Prot...   134   6e-30
UniRef50_Q5L3G9 Cluster: DEAD-box ATP-dependent RNA helicase ydb...   134   6e-30
UniRef50_A4FZ46 Cluster: DEAD/DEAH box helicase domain protein; ...   134   7e-30
UniRef50_Q966L9 Cluster: ATP-dependent RNA helicase glh-2; n=4; ...   134   7e-30
UniRef50_Q11039 Cluster: Cold-shock DEAD box protein A homolog; ...   134   7e-30
UniRef50_Q32LU9 Cluster: LOC562123 protein; n=3; Danio rerio|Rep...   133   1e-29
UniRef50_Q30YG9 Cluster: DEAD/DEAH box helicase-like; n=3; Delta...   133   1e-29
UniRef50_Q1N6E2 Cluster: ATP-dependent RNA helicase; n=1; Oceano...   133   1e-29
UniRef50_P23394 Cluster: Pre-mRNA-splicing ATP-dependent RNA hel...   133   1e-29
UniRef50_Q087U7 Cluster: DEAD/DEAH box helicase domain protein; ...   133   1e-29
UniRef50_A2TP65 Cluster: ATP-dependent RNA helicase, DEAD/DEAH b...   133   1e-29
UniRef50_A5E6W6 Cluster: ATP-dependent rRNA helicase RRP3; n=4; ...   133   1e-29
UniRef50_Q4FSS4 Cluster: Possible ATP-dependent DEAD/DEAH box RN...   132   2e-29
UniRef50_Q5CWD0 Cluster: Prp5p C terminal KH. eIF4A-1-family RNA...   132   2e-29
UniRef50_Q23WN3 Cluster: Helicase conserved C-terminal domain co...   132   2e-29
UniRef50_UPI0000E87E35 Cluster: putative ATP-dependent RNA helic...   132   2e-29
UniRef50_A1SQH8 Cluster: DEAD/DEAH box helicase domain protein p...   132   2e-29
UniRef50_A7TRT2 Cluster: Putative uncharacterized protein; n=1; ...   132   2e-29
UniRef50_A5DU73 Cluster: Pre-mRNA-splicing ATP-dependent RNA hel...   132   2e-29
UniRef50_UPI0000499D6F Cluster: DEAD/DEAH box helicase; n=1; Ent...   132   3e-29
UniRef50_Q1QYG3 Cluster: DEAD/DEAH box helicase-like protein; n=...   132   3e-29
UniRef50_Q7QDB7 Cluster: ENSANGP00000017541; n=1; Anopheles gamb...   132   3e-29
UniRef50_Q81VG0 Cluster: DEAD-box ATP-dependent RNA helicase ydb...   132   3e-29
UniRef50_P0A9P8 Cluster: Cold-shock DEAD box protein A; n=54; Ga...   132   3e-29
UniRef50_Q9KKW0 Cluster: ATP-dependent RNA helicase, DEAD box fa...   131   4e-29
UniRef50_Q1VL45 Cluster: DEAD/DEAH box helicase-like protein; n=...   131   4e-29
UniRef50_A7BCL2 Cluster: Putative uncharacterized protein; n=1; ...   131   4e-29
UniRef50_Q92GV2 Cluster: ATP-dependent RNA helicase RhlE; n=10; ...   131   5e-29
UniRef50_A6Q8Y9 Cluster: ATP-dependent RNA helicase, DEAD-box fa...   131   5e-29
UniRef50_A6NSW7 Cluster: Putative uncharacterized protein; n=1; ...   131   5e-29
UniRef50_A6GSW1 Cluster: Putative ATP-dependent RNA helicase; n=...   131   5e-29
UniRef50_A6DML6 Cluster: ATP-dependent RNA helicase; n=1; Lentis...   131   5e-29
UniRef50_A0LLL9 Cluster: DEAD/DEAH box helicase domain protein; ...   131   5e-29
UniRef50_Q5CWJ1 Cluster: Nucleolar protein GU2. eIF4A-1-family. ...   131   5e-29
UniRef50_A1IIT5 Cluster: RNA helicase; n=1; Neobenedenia girella...   131   5e-29
UniRef50_P38712 Cluster: ATP-dependent rRNA helicase RRP3; n=6; ...   131   5e-29
UniRef50_UPI0000498E70 Cluster: DEAD/DEAH box helicase; n=1; Ent...   130   7e-29
UniRef50_UPI00003C8469 Cluster: hypothetical protein Faci_030017...   130   7e-29
UniRef50_A4B5L7 Cluster: ATP-dependent RNA helicase DbpA; n=3; P...   130   7e-29
UniRef50_A0KZD5 Cluster: DEAD/DEAH box helicase domain protein; ...   130   7e-29
UniRef50_A1IIT4 Cluster: RNA helicase; n=1; Neobenedenia girella...   130   7e-29
UniRef50_Q6AMK6 Cluster: Probable ATP-dependent RNA helicase; n=...   130   9e-29
UniRef50_A4BET4 Cluster: DEAD/DEAH box helicase-like protein; n=...   130   9e-29
UniRef50_A4AFV6 Cluster: ATP-dependent RNA helicase; n=3; Actino...   130   9e-29
UniRef50_P96614 Cluster: DEAD-box ATP-dependent RNA helicase ydb...   130   9e-29
UniRef50_Q9HXE5 Cluster: ATP-dependent RNA helicase rhlB; n=22; ...   130   9e-29
UniRef50_Q6A6U7 Cluster: ATP-dependent RNA helicase; n=3; Actino...   130   1e-28
UniRef50_Q3AFI3 Cluster: ATP-dependent RNA helicase, DEAD box fa...   130   1e-28
UniRef50_Q019E9 Cluster: ATP-dependent RNA helicase; n=2; Ostreo...   130   1e-28
UniRef50_Q88NB7 Cluster: ATP-dependent RNA helicase rhlB; n=18; ...   130   1e-28
UniRef50_Q9H0S4 Cluster: Probable ATP-dependent RNA helicase DDX...   130   1e-28
UniRef50_Q39MK8 Cluster: DEAD/DEAH box helicase; n=10; Proteobac...   129   2e-28
UniRef50_Q1I3W1 Cluster: ATP-dependent RNA helicase RhlE, DEAD b...   129   2e-28
UniRef50_A3PFY9 Cluster: DEAD/DEAH box helicase domain protein; ...   129   2e-28
UniRef50_Q9RKJ0 Cluster: ATP-dependent RNA helicase; n=2; Strept...   129   2e-28
UniRef50_A4BBH5 Cluster: Probable ATP-dependent RNA helicase; n=...   129   2e-28
UniRef50_Q28T45 Cluster: DEAD/DEAH box helicase-like protein; n=...   128   3e-28
UniRef50_O26305 Cluster: ATP-dependent RNA helicase, eIF-4A fami...   128   3e-28
UniRef50_Q238V7 Cluster: Type III restriction enzyme, res subuni...   128   4e-28
UniRef50_Q5QVE4 Cluster: ATP-dependent RNA helicase; n=2; Idioma...   128   5e-28
UniRef50_A1G315 Cluster: DEAD/DEAH box helicase-like; n=2; Salin...   128   5e-28
UniRef50_UPI0000E48294 Cluster: PREDICTED: similar to DEAD (Asp-...   127   6e-28
UniRef50_Q81QF0 Cluster: ATP-dependent RNA helicase, DEAD/DEAH b...   127   6e-28
UniRef50_Q0AR94 Cluster: DEAD/DEAH box helicase domain protein; ...   127   6e-28
UniRef50_A5EYB1 Cluster: ATP-dependent rna helicase Rhl; n=2; Ga...   127   6e-28
UniRef50_Q9W3Y5 Cluster: Putative ATP-dependent RNA helicase CG1...   127   6e-28
UniRef50_UPI0000499ECF Cluster: DEAD/DEAH box helicase; n=1; Ent...   127   9e-28
UniRef50_Q7VFA9 Cluster: ATP-dependent RNA helicase DeaD; n=6; H...   127   9e-28
UniRef50_Q5T1V6 Cluster: Probable ATP-dependent RNA helicase DDX...   127   9e-28
UniRef50_Q8A2K2 Cluster: ATP-dependent RNA helicase; n=10; cellu...   126   1e-27
UniRef50_A1U3D6 Cluster: DEAD/DEAH box helicase domain protein; ...   126   1e-27
UniRef50_Q8EJQ5 Cluster: ATP-dependent RNA helicase rhlB; n=62; ...   126   1e-27
UniRef50_Q8D6Y8 Cluster: Superfamily II DNA and RNA helicase; n=...   126   1e-27
UniRef50_Q6MBR0 Cluster: Putative ATP-dependent RNA helicase; n=...   126   1e-27
UniRef50_A4BHZ9 Cluster: ATP-dependent RNA helicase; n=1; Reinek...   126   1e-27
UniRef50_Q7R3F3 Cluster: GLP_158_79919_77949; n=1; Giardia lambl...   126   1e-27
UniRef50_Q7A4G0 Cluster: Probable DEAD-box ATP-dependent RNA hel...   126   1e-27
UniRef50_P44586 Cluster: Cold-shock DEAD box protein A homolog; ...   126   1e-27
UniRef50_Q6MN50 Cluster: ATP-dependent RNA helicase; n=1; Bdello...   126   2e-27
UniRef50_A6T3R2 Cluster: ATP-dependent RNA helicase; n=52; cellu...   126   2e-27
UniRef50_A4M6V6 Cluster: DEAD/DEAH box helicase domain protein; ...   126   2e-27
UniRef50_A3TJG3 Cluster: ATP-dependent RNA helicase; n=5; Actino...   126   2e-27
UniRef50_O83749 Cluster: ATP-dependent RNA helicase; n=2; Trepon...   125   3e-27
UniRef50_Q11QF9 Cluster: Inducible ATP-independent RNA helicase;...   125   3e-27
UniRef50_Q0HKH0 Cluster: DEAD/DEAH box helicase domain protein; ...   125   3e-27
UniRef50_A6VWX2 Cluster: DEAD/DEAH box helicase domain protein; ...   125   3e-27
UniRef50_A6H0L1 Cluster: Probable ATP-dependent RNA helicase, DE...   125   3e-27
UniRef50_A4LYS0 Cluster: DEAD/DEAH box helicase domain protein; ...   125   3e-27
UniRef50_Q8D563 Cluster: Superfamily II DNA and RNA helicase; n=...   125   3e-27
UniRef50_Q6MQY6 Cluster: ATP-dependent RNA helicase; n=1; Bdello...   125   3e-27
UniRef50_Q4IZ16 Cluster: DEAD/DEAH box helicase:Helicase, C-term...   125   3e-27
UniRef50_Q11UP8 Cluster: ATP-dependent RNA helicase; n=1; Cytoph...   125   3e-27
UniRef50_Q11U28 Cluster: ATP-dependent RNA helicase protein; n=4...   125   3e-27
UniRef50_Q0C4R1 Cluster: ATP-dependent RNA helicase, DEAD/DEAH b...   125   3e-27
UniRef50_Q7QTB0 Cluster: GLP_15_15676_17025; n=1; Giardia lambli...   125   3e-27
UniRef50_Q54CD8 Cluster: Putative RNA helicase; n=2; Dictyosteli...   125   3e-27
UniRef50_A2D7F9 Cluster: DEAD/DEAH box helicase family protein; ...   125   3e-27
UniRef50_Q39189 Cluster: DEAD-box ATP-dependent RNA helicase 7; ...   125   3e-27
UniRef50_Q58083 Cluster: Probable ATP-dependent RNA helicase MJ0...   125   3e-27
UniRef50_Q6KI10 Cluster: DEAD-box ATP-dependent RNA helicase; n=...   124   5e-27
UniRef50_Q5QWG1 Cluster: ATP-dependent RNA helicase; n=1; Idioma...   124   5e-27
UniRef50_A6TUK6 Cluster: DEAD/DEAH box helicase domain protein; ...   124   5e-27
UniRef50_A0K1H7 Cluster: DEAD/DEAH box helicase domain protein; ...   124   5e-27
UniRef50_UPI00015B5BD1 Cluster: PREDICTED: similar to RE48840p; ...   124   6e-27
UniRef50_UPI00015B5BA9 Cluster: PREDICTED: similar to RE48840p; ...   124   6e-27
UniRef50_A7HDE9 Cluster: DEAD/DEAH box helicase domain protein; ...   124   6e-27
UniRef50_A6VX62 Cluster: DEAD/DEAH box helicase domain protein; ...   124   6e-27
UniRef50_Q53FI9 Cluster: Nucleolar protein GU2 variant; n=3; Eut...   124   6e-27
UniRef50_Q62J95 Cluster: ATP-dependent RNA helicase RhlE, putati...   124   8e-27
UniRef50_Q15T34 Cluster: DEAD/DEAH box helicase-like; n=1; Pseud...   124   8e-27
UniRef50_A6Q863 Cluster: ATP-dependent RNA helicase; n=1; Sulfur...   124   8e-27
UniRef50_A7RHS2 Cluster: Predicted protein; n=1; Nematostella ve...   124   8e-27
UniRef50_Q09719 Cluster: ATP-dependent RNA helicase dbp10; n=2; ...   124   8e-27
UniRef50_Q4PNH7 Cluster: Putative cold-shock dead-box protein A;...   123   1e-26
UniRef50_A2U1Q9 Cluster: ATP-dependent RNA helicase, DEAD/DEAH b...   123   1e-26
UniRef50_A2SQE1 Cluster: DEAD/DEAH box helicase domain protein; ...   123   1e-26
UniRef50_Q3EBD3 Cluster: DEAD-box ATP-dependent RNA helicase 41;...   123   1e-26
UniRef50_Q6BLU9 Cluster: Pre-mRNA-splicing ATP-dependent RNA hel...   123   1e-26
UniRef50_Q2LY23 Cluster: Superfamily II DNA and RNA helicases; n...   123   1e-26
UniRef50_Q26CN9 Cluster: ATP-dependent RNA helicase; n=1; Flavob...   123   1e-26
UniRef50_A6DK15 Cluster: ATP-dependent RNA helicase, specific fo...   123   1e-26
UniRef50_A3WBM2 Cluster: Cold-shock dead-box protein A; n=1; Ery...   123   1e-26
UniRef50_A1UCR5 Cluster: DEAD/DEAH box helicase domain protein; ...   123   1e-26
UniRef50_Q4P3U9 Cluster: ATP-dependent rRNA helicase RRP3; n=20;...   123   1e-26
UniRef50_Q9H8H2 Cluster: Probable ATP-dependent RNA helicase DDX...   123   1e-26
UniRef50_Q89IS2 Cluster: Cold-shock dead-box protein A; n=28; Al...   122   2e-26
UniRef50_Q6F0U0 Cluster: ATP-dependent RNA helicase; n=1; Mesopl...   122   2e-26
UniRef50_Q5QY63 Cluster: ATP-dependent RNA helicase; n=3; Altero...   122   2e-26
UniRef50_Q5NZY2 Cluster: ATP-dependent RNA helicase DeaD; n=18; ...   122   2e-26
UniRef50_Q4QJI9 Cluster: Nucleolar RNA helicase II, putative; n=...   122   2e-26
UniRef50_Q6MHS8 Cluster: ATP-dependent RNA helicase; n=1; Bdello...   122   2e-26
UniRef50_Q5ZT20 Cluster: ATP-dependent RNA helicase; n=4; Legion...   122   2e-26
UniRef50_A4C6L9 Cluster: ATP-dependent RNA helicase, DEAD box fa...   122   2e-26
UniRef50_A7P8T9 Cluster: Chromosome chr3 scaffold_8, whole genom...   122   2e-26
UniRef50_Q54TJ4 Cluster: Putative uncharacterized protein; n=1; ...   122   2e-26
UniRef50_Q9NR30 Cluster: Nucleolar RNA helicase 2; n=51; Euteleo...   122   2e-26
UniRef50_Q8D3Y6 Cluster: ATP-dependent RNA helicase, DEAD box fa...   122   3e-26
UniRef50_Q6YPL1 Cluster: Superfamily II DNA and RNA helicase; n=...   122   3e-26
UniRef50_A5CVQ6 Cluster: ATP-dependent RNA helicase DeaD; n=2; s...   122   3e-26
UniRef50_Q011U7 Cluster: Myc-regulated DEAD/H box 18 RNA helicas...   122   3e-26
UniRef50_Q2NEZ7 Cluster: Predicted helicase; n=6; cellular organ...   122   3e-26
UniRef50_Q4SJI2 Cluster: Chromosome 4 SCAF14575, whole genome sh...   121   4e-26
UniRef50_Q5FNK0 Cluster: ATP-dependent RNA helicase; n=1; Glucon...   121   4e-26
UniRef50_Q61JF4 Cluster: Putative uncharacterized protein CBG098...   121   4e-26
UniRef50_Q0W8H7 Cluster: ATP-dependent RNA helicase; n=1; uncult...   121   4e-26
UniRef50_UPI0000D573C1 Cluster: PREDICTED: similar to CG8611-PA,...   121   6e-26
UniRef50_A3I1F5 Cluster: DEAD/DEAH box helicase-like protein; n=...   121   6e-26
UniRef50_A7S2R2 Cluster: Predicted protein; n=5; Eumetazoa|Rep: ...   121   6e-26
UniRef50_A4V6M8 Cluster: Nucleolar RNA helicase II/Gu protein; n...   121   6e-26
UniRef50_A3JG19 Cluster: ATP-dependent RNA helicase; n=1; Marino...   120   7e-26
UniRef50_Q234J0 Cluster: DEAD/DEAH box helicase family protein; ...   120   7e-26
UniRef50_UPI0000499A01 Cluster: DEAD/DEAH box helicase; n=1; Ent...   120   1e-25
UniRef50_Q688Z4 Cluster: Putative uncharacterized protein; n=3; ...   120   1e-25
UniRef50_Q4UBV5 Cluster: DEAD-box family (RNA) helicase, putativ...   120   1e-25
UniRef50_P21507 Cluster: ATP-dependent RNA helicase srmB; n=82; ...   120   1e-25
UniRef50_Q7VQL9 Cluster: Cold-shock DEAD-box protein A, inducibl...   120   1e-25
UniRef50_Q2S6I0 Cluster: ATP-dependent RNA helicase; n=1; Salini...   120   1e-25
UniRef50_A4IBK1 Cluster: ATP-dependent RNA helicase, putative; n...   120   1e-25
UniRef50_Q03532 Cluster: ATP-dependent RNA helicase HAS1; n=70; ...   120   1e-25
UniRef50_A0V009 Cluster: DEAD/DEAH box helicase-like; n=1; Clost...   119   2e-25
UniRef50_Q9KNA4 Cluster: ATP-dependent RNA helicase, DEAD box fa...   119   2e-25
UniRef50_Q6MN90 Cluster: RNA helicase; n=1; Bdellovibrio bacteri...   119   2e-25
UniRef50_Q9S531 Cluster: DEAD-box protein; n=4; Cystobacterineae...   119   2e-25
UniRef50_A7QRK7 Cluster: Chromosome undetermined scaffold_151, w...   119   2e-25
UniRef50_A4RBW7 Cluster: Putative uncharacterized protein; n=4; ...   119   2e-25
UniRef50_P20448 Cluster: ATP-dependent RNA helicase DBP4; n=13; ...   119   2e-25
UniRef50_Q12389 Cluster: ATP-dependent RNA helicase DBP10; n=10;...   119   2e-25
UniRef50_Q725W5 Cluster: ATP-dependent RNA helicase, DEAD/DEAH f...   118   3e-25
UniRef50_Q5BYH3 Cluster: SJCHGC05414 protein; n=1; Schistosoma j...   118   3e-25
UniRef50_Q22T03 Cluster: DEAD/DEAH box helicase family protein; ...   118   3e-25
UniRef50_O49289 Cluster: Putative DEAD-box ATP-dependent RNA hel...   118   3e-25
UniRef50_Q8TDD1 Cluster: ATP-dependent RNA helicase DDX54; n=45;...   118   3e-25
UniRef50_UPI0000F1F65D Cluster: PREDICTED: hypothetical protein;...   118   4e-25
UniRef50_UPI0000E49031 Cluster: PREDICTED: similar to DEAD/DEXH ...   118   4e-25
UniRef50_A0JYP4 Cluster: DEAD/DEAH box helicase domain protein; ...   118   4e-25
UniRef50_Q4Q1N9 Cluster: DEAD box RNA helicase, putative; n=5; T...   118   4e-25
UniRef50_Q2H2J1 Cluster: ATP-dependent RNA helicase DBP4; n=14; ...   118   4e-25
UniRef50_UPI00015B6038 Cluster: PREDICTED: similar to DEAD box A...   118   5e-25
UniRef50_Q2J6D3 Cluster: DEAD/DEAH box helicase-like; n=2; Frank...   118   5e-25
UniRef50_Q9NVP1 Cluster: ATP-dependent RNA helicase DDX18; n=24;...   118   5e-25
UniRef50_Q2Z064 Cluster: Probable ATP-dependent RNA helicase; n=...   117   7e-25
UniRef50_Q2BIX8 Cluster: Probable ATP-dependent RNA helicase; n=...   117   7e-25
UniRef50_Q4P5U4 Cluster: ATP-dependent RNA helicase DBP4; n=1; U...   117   7e-25
UniRef50_A4R5B8 Cluster: ATP-dependent RNA helicase DBP10; n=2; ...   117   7e-25
UniRef50_Q21EB3 Cluster: DEAD/DEAH box helicase-like protein; n=...   117   9e-25
UniRef50_A1FEC3 Cluster: DEAD/DEAH box helicase-like; n=21; Gamm...   117   9e-25
UniRef50_Q9VX34 Cluster: CG5800-PA; n=2; Sophophora|Rep: CG5800-...   117   9e-25
UniRef50_Q8SSG7 Cluster: PUTATIVE ATP-DEPENDENT RNA HELICASE; n=...   117   9e-25
UniRef50_Q2FKY7 Cluster: DEAD/DEAH box helicase-like; n=1; Metha...   117   9e-25
UniRef50_Q6CZD9 Cluster: ATP-dependent RNA helicase rhlB; n=2; G...   116   1e-24
UniRef50_UPI0000DB7667 Cluster: PREDICTED: similar to CG32344-PA...   116   2e-24
UniRef50_Q8EZ11 Cluster: ATP-dependent RNA helicase; n=4; Leptos...   116   2e-24
UniRef50_Q6A841 Cluster: Putative ATP-dependent RNA helicase; n=...   116   2e-24
UniRef50_A4S6M9 Cluster: Predicted protein; n=3; Ostreococcus|Re...   116   2e-24
UniRef50_Q6BFH3 Cluster: Nucleolar RNA helicase II, putative; n=...   116   2e-24
UniRef50_A2EQ41 Cluster: DEAD/DEAH box helicase family protein; ...   116   2e-24
UniRef50_Q96XQ7 Cluster: 337aa long hypothetical ATP-dependent R...   116   2e-24
UniRef50_Q6C7X8 Cluster: ATP-dependent RNA helicase DBP10; n=3; ...   116   2e-24
UniRef50_Q0UMB6 Cluster: ATP-dependent RNA helicase DBP10; n=1; ...   116   2e-24
UniRef50_UPI00015B617E Cluster: PREDICTED: hypothetical protein;...   116   2e-24
UniRef50_Q4V836 Cluster: MGC114699 protein; n=9; Deuterostomia|R...   116   2e-24
UniRef50_A2E5C2 Cluster: DEAD/DEAH box helicase family protein; ...   116   2e-24
UniRef50_A0C321 Cluster: Chromosome undetermined scaffold_146, w...   116   2e-24
UniRef50_Q6KZC2 Cluster: ATP-dependent RNA helicase; n=1; Picrop...   116   2e-24
UniRef50_Q9SB89 Cluster: DEAD-box ATP-dependent RNA helicase 27;...   116   2e-24
UniRef50_Q5BFU7 Cluster: ATP-dependent RNA helicase dbp10; n=14;...   116   2e-24
UniRef50_UPI00015B5D7B Cluster: PREDICTED: similar to LD28101p; ...   115   3e-24
UniRef50_Q1FMF9 Cluster: Helicase-like:DbpA, RNA-binding:DEAD/DE...   115   3e-24
UniRef50_Q5VRY0 Cluster: DEAD-box ATP-dependent RNA helicase 39;...   115   3e-24
UniRef50_Q8GY84 Cluster: DEAD-box ATP-dependent RNA helicase 10;...   115   3e-24
UniRef50_A5DAR2 Cluster: ATP-dependent RNA helicase DBP7; n=2; P...   115   3e-24
UniRef50_UPI00003937F7 Cluster: COG0513: Superfamily II DNA and ...   115   4e-24
UniRef50_Q8G5U3 Cluster: Possible ATP-dependent RNA helicase; n=...   115   4e-24
UniRef50_Q9FNM7 Cluster: DEAD-box ATP-dependent RNA helicase 26;...   115   4e-24
UniRef50_Q0HLM7 Cluster: DEAD/DEAH box helicase domain protein; ...   114   5e-24
UniRef50_A4RXX8 Cluster: Predicted protein; n=1; Ostreococcus lu...   114   5e-24
UniRef50_Q581A3 Cluster: ATP-dependent DEAD/H RNA helicase, puta...   114   5e-24
UniRef50_Q9DF36 Cluster: RNA helicase II/Gu; n=9; Tetrapoda|Rep:...   114   6e-24
UniRef50_Q31EF0 Cluster: ATP-dependent RNA helicase; n=1; Thiomi...   114   6e-24
UniRef50_O66866 Cluster: ATP-dependent RNA helicase DeaD; n=1; A...   114   6e-24
UniRef50_A2DB16 Cluster: DEAD/DEAH box helicase family protein; ...   114   6e-24
UniRef50_A4RHM4 Cluster: Putative uncharacterized protein; n=1; ...   114   6e-24
UniRef50_Q80Y44 Cluster: Probable ATP-dependent RNA helicase DDX...   114   6e-24
UniRef50_Q98RE0 Cluster: ATP-DEPENDENT RNA HELICASE; n=1; Mycopl...   113   9e-24
UniRef50_A0M3C7 Cluster: RhlE-like DEAD box family ATP-dependent...   113   9e-24
UniRef50_Q8SY39 Cluster: LD28101p; n=3; Diptera|Rep: LD28101p - ...   113   9e-24
UniRef50_A5K2E0 Cluster: DEAD/DEAH box ATP-dependent RNA helicas...   113   9e-24
UniRef50_A0D232 Cluster: Chromosome undetermined scaffold_35, wh...   113   9e-24
UniRef50_Q0CX32 Cluster: DEAD-box protein 3; n=11; Pezizomycotin...   113   9e-24
UniRef50_Q4RK69 Cluster: Chromosome 2 SCAF15032, whole genome sh...   113   1e-23
UniRef50_Q9KLE2 Cluster: ATP-dependent RNA helicase DeaD; n=35; ...   113   1e-23
UniRef50_Q86B47 Cluster: CG8611-PB, isoform B; n=2; Drosophila m...   113   1e-23
UniRef50_Q4Q1P0 Cluster: DEAD box RNA helicase, putative; n=5; T...   113   1e-23
UniRef50_Q4N4B1 Cluster: ATP-dependent RNA helicase, putative; n...   113   1e-23
UniRef50_Q6NHC6 Cluster: Putative RNA helicase; n=2; Corynebacte...   113   1e-23
UniRef50_A4SWL3 Cluster: DEAD/DEAH box helicase domain protein; ...   113   1e-23
UniRef50_P44701 Cluster: ATP-dependent RNA helicase srmB homolog...   113   1e-23
UniRef50_Q2H0R2 Cluster: ATP-dependent RNA helicase DBP10; n=1; ...   113   1e-23
UniRef50_UPI00004987FF Cluster: DEAD/DEAH box helicase; n=5; Ent...   112   2e-23
UniRef50_Q14NT1 Cluster: Putative atp-dependent rna helicase pro...   112   2e-23
UniRef50_Q5KPU1 Cluster: ATP-dependent RNA helicase DBP8; n=2; F...   112   2e-23
UniRef50_UPI00015BD198 Cluster: UPI00015BD198 related cluster; n...   112   3e-23

>UniRef50_Q8MZI3 Cluster: GH10652p; n=2; Drosophila melanogaster|Rep:
            GH10652p - Drosophila melanogaster (Fruit fly)
          Length = 818

 Score =  369 bits (907), Expect = e-100
 Identities = 186/292 (63%), Positives = 222/292 (76%)
 Frame = +3

Query: 114  GKNLVGVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVASEF 293
            G++LVGVAQTGSGKTLAY+LPA+VHINNQP + RGDGPIALVLAPTRELAQQIQQVA EF
Sbjct: 194  GRDLVGVAQTGSGKTLAYVLPAVVHINNQPRLERGDGPIALVLAPTRELAQQIQQVAIEF 253

Query: 294  GNSSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEA 473
            G++++VRNTC+FGGAPK +QARDLERGVEIVIATPGRLIDFLE+GTT+L+RCTYLVLDEA
Sbjct: 254  GSNTHVRNTCIFGGAPKGQQARDLERGVEIVIATPGRLIDFLERGTTSLKRCTYLVLDEA 313

Query: 474  DRMLDMGFEPQIRKIIDQIRPDRQTLMWSATWPKEVRKLAEDYLXDYVQINIGSLQLSAN 653
            DRMLDMGFEPQIRKI+ QIRPDRQ LMWSATWPKEVR+LAE++L +Y+Q+NIGSL LSAN
Sbjct: 314  DRMLDMGFEPQIRKIMQQIRPDRQVLMWSATWPKEVRQLAEEFLNNYIQVNIGSLSLSAN 373

Query: 654  HNILQIVDVCQEHEKENKLNVLLQEIGQNQDPGARPLYLLKLKEKRXTXPEISDDMDGQL 833
            HNILQIVDVC E+EK  KL  LL +I    +   + +  ++ K++             + 
Sbjct: 374  HNILQIVDVCDENEKLMKLIKLLTDISAENE--TKTIIFVETKKRVDEITRNISRQGWRA 431

Query: 834  CACTXTNTARKG*SXXPILKRVVSSILVATDVGCXRS*CGMGSNFXINFDXP 989
            CA     + ++        +    SILVATDV   R        F IN+D P
Sbjct: 432  CAIHGDKSQQERDFVLSSFRNGRHSILVATDVAA-RGLDVDDVKFVINYDYP 482


>UniRef50_P19109 Cluster: ATP-dependent RNA helicase p62; n=9;
            Eukaryota|Rep: ATP-dependent RNA helicase p62 -
            Drosophila melanogaster (Fruit fly)
          Length = 719

 Score =  368 bits (905), Expect = e-100
 Identities = 185/292 (63%), Positives = 215/292 (73%)
 Frame = +3

Query: 114  GKNLVGVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVASEF 293
            G N VG+A+TGSGKTL YILPAIVHINNQ P++RGDGPIALVLAPTRELAQQIQQVA+EF
Sbjct: 318  GSNFVGIAKTGSGKTLGYILPAIVHINNQQPLQRGDGPIALVLAPTRELAQQIQQVATEF 377

Query: 294  GNSSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEA 473
            G+SSYVRNTCVFGGAPK  Q RDL+RG EIVIATPGRLIDFL  G+TNL+RCTYLVLDEA
Sbjct: 378  GSSSYVRNTCVFGGAPKGGQMRDLQRGCEIVIATPGRLIDFLSAGSTNLKRCTYLVLDEA 437

Query: 474  DRMLDMGFEPQIRKIIDQIRPDRQTLMWSATWPKEVRKLAEDYLXDYVQINIGSLQLSAN 653
            DRMLDMGFEPQIRKI+ QIRPDRQTLMWSATWPKEV++LAED+L +Y+QINIGSL+LSAN
Sbjct: 438  DRMLDMGFEPQIRKIVSQIRPDRQTLMWSATWPKEVKQLAEDFLGNYIQINIGSLELSAN 497

Query: 654  HNILQIVDVCQEHEKENKLNVLLQEIGQNQDPGARPLYLLKLKEKRXTXPEISDDMDGQL 833
            HNI Q+VDVC E  KE KL  LL +I    +   + +  ++ K +             + 
Sbjct: 498  HNIRQVVDVCDEFSKEEKLKTLLSDIYDTSESPGKIIIFVETKRRVDNLVRFIRSFGVRC 557

Query: 834  CACTXTNTARKG*SXXPILKRVVSSILVATDVGCXRS*CGMGSNFXINFDXP 989
             A     +  +        +   S+ILVATDV   R     G  + INFD P
Sbjct: 558  GAIHGDKSQSERDFVLREFRSGKSNILVATDVAA-RGLDVDGIKYVINFDYP 608


>UniRef50_Q17JB5 Cluster: DEAD box ATP-dependent RNA helicase; n=4;
           Eukaryota|Rep: DEAD box ATP-dependent RNA helicase -
           Aedes aegypti (Yellowfever mosquito)
          Length = 699

 Score =  347 bits (854), Expect = 3e-94
 Identities = 163/211 (77%), Positives = 183/211 (86%)
 Frame = +3

Query: 114 GKNLVGVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVASEF 293
           G+++VG+AQTGSGKTLAYI PA+VHI +Q  +RRGDGPIALVLAPTRELAQQIQQVA++F
Sbjct: 159 GRDMVGIAQTGSGKTLAYIAPALVHITHQDQLRRGDGPIALVLAPTRELAQQIQQVATDF 218

Query: 294 GNSSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEA 473
           G      NTCVFGGAPK  Q RDLERG EIVIATPGRLIDFLE+G TNL+RCTYLVLDEA
Sbjct: 219 GQRINANNTCVFGGAPKGPQIRDLERGAEIVIATPGRLIDFLERGITNLRRCTYLVLDEA 278

Query: 474 DRMLDMGFEPQIRKIIDQIRPDRQTLMWSATWPKEVRKLAEDYLXDYVQINIGSLQLSAN 653
           DRMLDMGFEPQIRKI+ QIRPDRQ LMWSATWPKEVR LAE++L DY+QINIGSL LSAN
Sbjct: 279 DRMLDMGFEPQIRKIMGQIRPDRQVLMWSATWPKEVRNLAEEFLNDYIQINIGSLNLSAN 338

Query: 654 HNILQIVDVCQEHEKENKLNVLLQEIGQNQD 746
           HNILQIVDVC+++EK+ KL  LL EI    +
Sbjct: 339 HNILQIVDVCEDYEKDQKLMKLLTEISAENE 369



 Score = 39.9 bits (89), Expect = 0.17
 Identities = 20/49 (40%), Positives = 25/49 (51%)
 Frame = +2

Query: 755 KTIIFVETKRKAXXXXXXXXXYGWPAVCMHXDKHSKKGMKXFXNFKEGR 901
           KTIIFVETKR+           GW AV +H DK  ++       F+ GR
Sbjct: 371 KTIIFVETKRRVDDITRNINRNGWRAVSIHGDKSQQERDYVLNAFRNGR 419


>UniRef50_Q17KA8 Cluster: DEAD box ATP-dependent RNA helicase; n=1;
            Aedes aegypti|Rep: DEAD box ATP-dependent RNA helicase -
            Aedes aegypti (Yellowfever mosquito)
          Length = 718

 Score =  346 bits (850), Expect = 1e-93
 Identities = 174/292 (59%), Positives = 212/292 (72%)
 Frame = +3

Query: 114  GKNLVGVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVASEF 293
            G+++VG+A+TGSGKTLAYILPA++HI+NQP + RGDGPIALVLAPTRELAQQIQQV ++F
Sbjct: 138  GRDMVGIAKTGSGKTLAYILPALIHISNQPRLLRGDGPIALVLAPTRELAQQIQQVCNDF 197

Query: 294  GNSSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEA 473
            G    + NTC+FGGA K  QA DL RGVEIVIATPGRLIDFLE GTTNL+R TYLVLDEA
Sbjct: 198  GRRMSIMNTCIFGGASKHPQADDLRRGVEIVIATPGRLIDFLESGTTNLRRTTYLVLDEA 257

Query: 474  DRMLDMGFEPQIRKIIDQIRPDRQTLMWSATWPKEVRKLAEDYLXDYVQINIGSLQLSAN 653
            DRMLDMGFEPQIRKII QIRPDRQ LMWSATWPKE+RKLAE++L +Y+QINIGSL L+AN
Sbjct: 258  DRMLDMGFEPQIRKIISQIRPDRQVLMWSATWPKEIRKLAEEFLREYIQINIGSLNLAAN 317

Query: 654  HNILQIVDVCQEHEKENKLNVLLQEIGQNQDPGARPLYLLKLKEKRXTXPEISDDMDGQL 833
             NI+QI++ C+E+EKE +L  LL E+ Q  D  ++ +  ++ K K      +      + 
Sbjct: 318  ENIMQIIECCEEYEKETRLFKLLTELSQQGD--SKSIIFVETKRKVDQITNVIKRNGWRC 375

Query: 834  CACTXTNTARKG*SXXPILKRVVSSILVATDVGCXRS*CGMGSNFXINFDXP 989
                   T +         +R+ S ILVATDV   R        + INFD P
Sbjct: 376  DGIHGDKTQKDRDYVLNTFRRLRSGILVATDV-ASRGLDVDDVKYVINFDFP 426


>UniRef50_Q16XX4 Cluster: DEAD box ATP-dependent RNA helicase; n=5;
            Neoptera|Rep: DEAD box ATP-dependent RNA helicase - Aedes
            aegypti (Yellowfever mosquito)
          Length = 911

 Score =  339 bits (834), Expect = 9e-92
 Identities = 180/295 (61%), Positives = 214/295 (72%), Gaps = 3/295 (1%)
 Frame = +3

Query: 114  GKNLVGVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVASEF 293
            G++LVG+AQTGSGKTLAY+LP IVHI +Q P++RG+GP+ LVLAPTRELAQQIQ V  +F
Sbjct: 266  GRDLVGIAQTGSGKTLAYMLPGIVHIAHQKPLQRGEGPVVLVLAPTRELAQQIQTVVRDF 325

Query: 294  GNSS--YVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLD 467
            G  S   +R TC+FGGA K  Q RDLERGVE+VIATPGRLIDFLE+G TNL+RCTYLVLD
Sbjct: 326  GTHSKPLIRYTCIFGGALKGPQVRDLERGVEVVIATPGRLIDFLERGITNLRRCTYLVLD 385

Query: 468  EADRMLDMGFEPQIRKIIDQIRPDRQTLMWSATWPKEVRKLAEDYLXDYVQINIGSLQLS 647
            EADRMLDMGFEPQIRKII+QIRPDRQ LMWSATWPKEV+ LAED+L DY+QINIGSL LS
Sbjct: 386  EADRMLDMGFEPQIRKIIEQIRPDRQVLMWSATWPKEVQALAEDFLHDYIQINIGSLNLS 445

Query: 648  ANHNILQIVDVCQEHEKENKLNVLLQEIGQNQDPGARPLYLLKLKEK-RXTXPEISDDMD 824
            ANHNI QIVDVC+E EKE KL  LL+EI  + D  ++ +  ++ K+K       I  D  
Sbjct: 446  ANHNIHQIVDVCEEGEKEGKLLSLLKEI--SSDVNSKIIIFVETKKKVEDLLKNIVRDGY 503

Query: 825  GQLCACTXTNTARKG*SXXPILKRVVSSILVATDVGCXRS*CGMGSNFXINFDXP 989
            G        + + +        +   S+ILVATDV   R        + INFD P
Sbjct: 504  GATSIHGDKSQSERD-YVLQDFRHGKSTILVATDVAA-RGLDVEDVKYVINFDYP 556


>UniRef50_Q17II7 Cluster: DEAD box ATP-dependent RNA helicase; n=1;
           Aedes aegypti|Rep: DEAD box ATP-dependent RNA helicase -
           Aedes aegypti (Yellowfever mosquito)
          Length = 639

 Score =  331 bits (814), Expect = 2e-89
 Identities = 168/293 (57%), Positives = 212/293 (72%), Gaps = 1/293 (0%)
 Frame = +3

Query: 114 GKNLVGVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVASEF 293
           G+++VG+A+TGSGKTL+Y+LPA++HI+ Q  +RRGDGPIAL+LAPTRELAQQI+QV  +F
Sbjct: 124 GRDMVGIAKTGSGKTLSYLLPALMHIDQQSRLRRGDGPIALILAPTRELAQQIKQVTDDF 183

Query: 294 GNSSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEA 473
           G +  ++NTC+FGG  KR+Q  DL+ GVEIVIATPGRLIDFL    TNL+RC+YLVLDEA
Sbjct: 184 GRAMKIKNTCLFGGGAKRQQGDDLKYGVEIVIATPGRLIDFLSSEHTNLRRCSYLVLDEA 243

Query: 474 DRMLDMGFEPQIRKIIDQIRPDRQTLMWSATWPKEVRKLAEDYLXDYVQINIGSLQLSAN 653
           DRMLDMGFEPQIR II+QIRPD QTLMWSATWP  V +L +DYL DY+QIN+GSL+L+AN
Sbjct: 244 DRMLDMGFEPQIRAIIEQIRPDHQTLMWSATWPDAVSRLVKDYLKDYIQINVGSLKLAAN 303

Query: 654 HNILQIVDVCQEHEKENKLNVLLQEIGQNQDPGARPLYLLKLKEKRXTXPEISDDMDGQL 833
           HNILQI+DVCQEHEKE KL++LL+EI   ++   + +  ++ K KR          DG  
Sbjct: 304 HNILQIIDVCQEHEKEAKLSILLREIMAEKE--CKTIIFIETK-KRVDDITRKVLRDGWP 360

Query: 834 CACT-XTNTARKG*SXXPILKRVVSSILVATDVGCXRS*CGMGSNFXINFDXP 989
             C     + R+        +   + IL+ATDV   R        F INFD P
Sbjct: 361 AMCIHGDKSQREREYTLNSFRSGKNPILIATDVAA-RGLDVDDVKFVINFDYP 412


>UniRef50_Q4IF76 Cluster: ATP-dependent RNA helicase DBP2; n=4;
           Fungi/Metazoa group|Rep: ATP-dependent RNA helicase DBP2
           - Gibberella zeae (Fusarium graminearum)
          Length = 555

 Score =  309 bits (758), Expect = 1e-82
 Identities = 143/211 (67%), Positives = 174/211 (82%)
 Frame = +3

Query: 114 GKNLVGVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVASEF 293
           G+++VG+A+TGSGKTL Y LP+IVHIN QP +  GDGPI LVLAPTRELA QIQ+   +F
Sbjct: 171 GRDVVGIAETGSGKTLTYCLPSIVHINAQPLLAPGDGPIVLVLAPTRELAVQIQEEMKKF 230

Query: 294 GNSSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEA 473
           G SS +RNTCV+GG PK  Q RDL RGVE+ IATPGRLID LE G TNL+R TYLVLDEA
Sbjct: 231 GRSSRIRNTCVYGGVPKGPQIRDLSRGVEVCIATPGRLIDMLEAGKTNLRRVTYLVLDEA 290

Query: 474 DRMLDMGFEPQIRKIIDQIRPDRQTLMWSATWPKEVRKLAEDYLXDYVQINIGSLQLSAN 653
           DRMLDMGFEPQIRKII QIRPDRQTLMWSATWPKEVR LA D+L D++Q+NIGS++L+AN
Sbjct: 291 DRMLDMGFEPQIRKIIGQIRPDRQTLMWSATWPKEVRALASDFLQDFIQVNIGSMELAAN 350

Query: 654 HNILQIVDVCQEHEKENKLNVLLQEIGQNQD 746
           H I QIV+V  E EK +++   ++++ +N++
Sbjct: 351 HRITQIVEVVTEMEKRDRMIKHMEKVMENKE 381



 Score = 35.9 bits (79), Expect = 2.7
 Identities = 18/49 (36%), Positives = 23/49 (46%)
 Frame = +2

Query: 755 KTIIFVETKRKAXXXXXXXXXYGWPAVCMHXDKHSKKGMKXFXNFKEGR 901
           K +IFV TKR A          GWPA+ +H DK   +       FK G+
Sbjct: 383 KILIFVGTKRVADEITRFLRQDGWPALSIHGDKQQNERDWVLDQFKTGK 431


>UniRef50_Q5N7W4 Cluster: DEAD-box ATP-dependent RNA helicase 30;
           n=11; Eukaryota|Rep: DEAD-box ATP-dependent RNA helicase
           30 - Oryza sativa subsp. japonica (Rice)
          Length = 666

 Score =  290 bits (712), Expect = 5e-77
 Identities = 134/207 (64%), Positives = 167/207 (80%)
 Frame = +3

Query: 111 QGKNLVGVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVASE 290
           +G++++G+AQTGSGKTL+Y+LP +VH+  QP + +GDGPI L+LAPTRELA QIQQ + +
Sbjct: 287 KGRDMIGIAQTGSGKTLSYLLPGLVHVGAQPRLEQGDGPIVLILAPTRELAVQIQQESGK 346

Query: 291 FGNSSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDE 470
           FG+ S  R+TC++GGAPK  Q RDL RGVEIVIATPGRLID LE G TNL+R TYLVLDE
Sbjct: 347 FGSYSRTRSTCIYGGAPKGPQIRDLRRGVEIVIATPGRLIDMLEGGHTNLRRVTYLVLDE 406

Query: 471 ADRMLDMGFEPQIRKIIDQIRPDRQTLMWSATWPKEVRKLAEDYLXDYVQINIGSLQLSA 650
           ADRMLDMGFEPQIRKI+ QIRPDRQTL WSATWP+EV  LA  +L +  ++ IGS  L A
Sbjct: 407 ADRMLDMGFEPQIRKIVAQIRPDRQTLYWSATWPREVESLARQFLQNPYKVIIGSPDLKA 466

Query: 651 NHNILQIVDVCQEHEKENKLNVLLQEI 731
           NH+I QI++V  EHEK  +L+ LL ++
Sbjct: 467 NHSIQQIIEVISEHEKYPRLSKLLSDL 493


>UniRef50_Q5CNJ7 Cluster: Similar to RNA-dependent helicase p68;
           n=2; Cryptosporidium|Rep: Similar to RNA-dependent
           helicase p68 - Cryptosporidium hominis
          Length = 406

 Score =  276 bits (676), Expect = 1e-72
 Identities = 150/296 (50%), Positives = 196/296 (66%), Gaps = 4/296 (1%)
 Frame = +3

Query: 114 GKNLVGVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVASEF 293
           G +++G+A+TGSGKTL ++LPA++HI  QP +R GDGPI LVLAPTREL +QI++ A++F
Sbjct: 25  GHDMIGIAETGSGKTLGFLLPAMIHIRAQPLLRYGDGPICLVLAPTRELVEQIREQANQF 84

Query: 294 GNSSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEA 473
           G+   +RNT ++GG PKR Q   +  GVEI IA PGRLID LE+G TNL R TYLVLDEA
Sbjct: 85  GSIFKLRNTAIYGGVPKRPQQASIRNGVEICIACPGRLIDLLEEGYTNLSRVTYLVLDEA 144

Query: 474 DRMLDMGFEPQIRKIIDQIRPDRQTLMWSATWPKEVRKLAEDYLXDY-VQINIGSLQ-LS 647
           DRMLDMGFEPQIRK++ QIRPDRQTL+WSATWPKEV+KLA D   +  + IN+GS+  L 
Sbjct: 145 DRMLDMGFEPQIRKLVSQIRPDRQTLLWSATWPKEVQKLARDLCKEIPIHINVGSVDALK 204

Query: 648 ANHNILQIVDVCQEHEKENKLNVLLQEIGQNQDPGARPLYLLKLKEKRXTXPEISD-DMD 824
           A+HNI Q V+V +E EK+ +L + L   GQ     A P  L+  + KR       +  +D
Sbjct: 205 ASHNIKQYVNVVEESEKKARLKMFL---GQVMVESA-PKVLIFCETKRGADILTKELRLD 260

Query: 825 GQLCACTXTNTARKG*S-XXPILKRVVSSILVATDVGCXRS*CGMGSNFXINFDXP 989
           G    C   +  ++  +      +   S I++ATDV   R       NF INFD P
Sbjct: 261 GWPALCIHGDKKQEERTWVLNEFRTGASPIMIATDVAA-RGLDIKDINFVINFDFP 315


>UniRef50_Q4N215 Cluster: RNA helicase, putative; n=3;
           Aconoidasida|Rep: RNA helicase, putative - Theileria
           parva
          Length = 635

 Score =  267 bits (655), Expect = 4e-70
 Identities = 132/207 (63%), Positives = 161/207 (77%), Gaps = 1/207 (0%)
 Frame = +3

Query: 114 GKNLVGVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVASEF 293
           G++++G+A+TGSGKTLA++LPAIVHIN Q  +R GDGPI LVLAPTRELA+QI++ A  F
Sbjct: 247 GRDMIGIAETGSGKTLAFLLPAIVHINAQALLRPGDGPIVLVLAPTRELAEQIKETALVF 306

Query: 294 GNSSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEA 473
           G SS ++ +  +GG PKR Q   L RGVEI+IA PGRLIDFLE   TNL+R TYLVLDEA
Sbjct: 307 GRSSKLKTSVAYGGVPKRFQTIALRRGVEILIACPGRLIDFLESSVTNLRRVTYLVLDEA 366

Query: 474 DRMLDMGFEPQIRKIIDQIRPDRQTLMWSATWPKEVRKLAEDYL-XDYVQINIGSLQLSA 650
           DRMLDMGFEPQIRKI+ QIRPDRQTLM+SATWPKEV  L+   L  + V +NIGSL L+ 
Sbjct: 367 DRMLDMGFEPQIRKIVGQIRPDRQTLMFSATWPKEVIALSRSLLSHEVVHVNIGSLDLTT 426

Query: 651 NHNILQIVDVCQEHEKENKLNVLLQEI 731
            HNI Q V + +E EK  KL  LL+++
Sbjct: 427 CHNIEQNVFILEEREKRVKLKELLKKL 453



 Score = 42.7 bits (96), Expect = 0.024
 Identities = 19/50 (38%), Positives = 26/50 (52%)
 Frame = +2

Query: 752 GKTIIFVETKRKAXXXXXXXXXYGWPAVCMHXDKHSKKGMKXFXNFKEGR 901
           GK +IF ETK+ A          GWPA+C+H DK  ++       FK G+
Sbjct: 457 GKILIFSETKKGADTLTRELRLDGWPALCIHGDKKQEERTWVLNEFKSGK 506


>UniRef50_Q8SRB2 Cluster: ATP-dependent RNA helicase DBP2; n=103;
           Eukaryota|Rep: ATP-dependent RNA helicase DBP2 -
           Encephalitozoon cuniculi
          Length = 495

 Score =  260 bits (638), Expect = 5e-68
 Identities = 121/199 (60%), Positives = 153/199 (76%)
 Frame = +3

Query: 114 GKNLVGVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVASEF 293
           G+++VG+AQTGSGKTL++ILPA+VH  +Q P+RRGDGPI LVLAPTREL  QI++V  EF
Sbjct: 124 GRDMVGIAQTGSGKTLSFILPALVHAKDQQPLRRGDGPIVLVLAPTRELVMQIKKVVDEF 183

Query: 294 GNSSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEA 473
                +R+T V+GGA  + Q R L  G E+VIATPGRLID  ++G   L R T+LVLDEA
Sbjct: 184 CGMFNLRSTAVYGGASSQPQIRALHEGAEVVIATPGRLIDLHDQGHAPLSRVTFLVLDEA 243

Query: 474 DRMLDMGFEPQIRKIIDQIRPDRQTLMWSATWPKEVRKLAEDYLXDYVQINIGSLQLSAN 653
           DRMLDMGFEPQ+RKII +   +RQTLMWSATWP+EVR LAE Y+ +Y+Q+ +G+ +L  N
Sbjct: 244 DRMLDMGFEPQLRKIIPKTNANRQTLMWSATWPREVRGLAESYMNEYIQVVVGNEELKTN 303

Query: 654 HNILQIVDVCQEHEKENKL 710
             I QIV+VC   EKE+KL
Sbjct: 304 SKIKQIVEVCSGREKEDKL 322


>UniRef50_Q24I45 Cluster: DEAD/DEAH box helicase family protein;
           n=2; Tetrahymena thermophila|Rep: DEAD/DEAH box helicase
           family protein - Tetrahymena thermophila SB210
          Length = 713

 Score =  256 bits (627), Expect = 1e-66
 Identities = 123/200 (61%), Positives = 157/200 (78%), Gaps = 1/200 (0%)
 Frame = +3

Query: 114 GKNLVGVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVASEF 293
           G +L+G+A+TGSGKTL+++LP+IVHIN QP +++GDGPI LVLAPTRELA QI++ +  F
Sbjct: 138 GHDLIGIAETGSGKTLSFLLPSIVHINAQPTVKKGDGPIVLVLAPTRELAMQIERESERF 197

Query: 294 GNSSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEA 473
           G SS ++  C++GGA K  Q   L++GV++VIATPGRLIDFLE  TT L+R TYLVLDEA
Sbjct: 198 GKSSKLKCACIYGGADKYSQRALLQQGVDVVIATPGRLIDFLESETTTLRRVTYLVLDEA 257

Query: 474 DRMLDMGFEPQIRKIIDQIRPDRQTLMWSATWPKEVRKLAEDYLXDY-VQINIGSLQLSA 650
           DRMLDMGFE QIRKI+ QIRPDRQTLM+SATWPK V+ LA+DY  +  V + IG  +L+ 
Sbjct: 258 DRMLDMGFEIQIRKILGQIRPDRQTLMFSATWPKNVQNLAQDYCKNTPVYVQIGKHELAI 317

Query: 651 NHNILQIVDVCQEHEKENKL 710
           N  I QIV V  + +K N+L
Sbjct: 318 NERIKQIVYVTDQSKKINQL 337


>UniRef50_UPI00006CD03A Cluster: P68-like protein, putative; n=1;
           Tetrahymena thermophila SB210|Rep: P68-like protein,
           putative - Tetrahymena thermophila SB210
          Length = 699

 Score =  253 bits (620), Expect = 8e-66
 Identities = 119/204 (58%), Positives = 159/204 (77%), Gaps = 1/204 (0%)
 Frame = +3

Query: 114 GKNLVGVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVASEF 293
           G +L+G+AQTGSGKTL+++LPA+VHIN Q P++ G+GPIALVLAPTRELA QIQ+   +F
Sbjct: 250 GHDLIGIAQTGSGKTLSFMLPALVHINAQDPVKPGEGPIALVLAPTRELANQIQEQCFKF 309

Query: 294 GNSSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEA 473
           G+   + + CV+GGAPK  Q ++L  G +IVIATPGRLIDFLE    +L+R TYLVLDEA
Sbjct: 310 GSKCKISSVCVYGGAPKIYQEKELRNGCDIVIATPGRLIDFLESNVIDLKRVTYLVLDEA 369

Query: 474 DRMLDMGFEPQIRKIIDQIRPDRQTLMWSATWPKEVRKLAEDYL-XDYVQINIGSLQLSA 650
           DRMLDMGFEP IRKI+ QIRPDRQTLM+SATWP+ VR+LA D+   D + I IG ++ + 
Sbjct: 370 DRMLDMGFEPSIRKIVGQIRPDRQTLMFSATWPQTVRRLALDFCHGDPIHIQIGDMENNV 429

Query: 651 NHNILQIVDVCQEHEKENKLNVLL 722
           N++I Q V++  + +K +++  +L
Sbjct: 430 NNDIDQQVEIIDKSQKYDRVKEIL 453


>UniRef50_Q8IL14 Cluster: Helicase, truncated, putative; n=3;
           Eukaryota|Rep: Helicase, truncated, putative -
           Plasmodium falciparum (isolate 3D7)
          Length = 352

 Score =  253 bits (619), Expect = 1e-65
 Identities = 121/193 (62%), Positives = 151/193 (78%), Gaps = 1/193 (0%)
 Frame = +3

Query: 114 GKNLVGVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVASEF 293
           GK+++G A+TGSGKTLA+ILPA VHI  QP ++ GDGPI LVLAPTRELA+QI+Q   +F
Sbjct: 150 GKDMIGKAETGSGKTLAFILPAFVHILAQPNLKYGDGPIVLVLAPTRELAEQIRQECIKF 209

Query: 294 GNSSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEA 473
              S +RNTC +GG PK  Q   L++GV I+IA PGRLID LE+  TNL R TYLVLDEA
Sbjct: 210 STESKIRNTCAYGGVPKSGQIYALKQGVHILIACPGRLIDLLEQNVTNLMRVTYLVLDEA 269

Query: 474 DRMLDMGFEPQIRKIIDQIRPDRQTLMWSATWPKEVRKLAEDYLXDY-VQINIGSLQLSA 650
           D+MLDMGFE QIRKI+DQIRPDRQTLMWSATWPKEV+ LA+D   +  +Q+N+GSL L+A
Sbjct: 270 DKMLDMGFELQIRKIVDQIRPDRQTLMWSATWPKEVQALAKDLCKEQPIQVNVGSLTLTA 329

Query: 651 NHNILQIVDVCQE 689
             +I Q + + ++
Sbjct: 330 CRSIKQEIYLLED 342


>UniRef50_A2EVI2 Cluster: DEAD/DEAH box helicase family protein;
           n=1; Trichomonas vaginalis G3|Rep: DEAD/DEAH box
           helicase family protein - Trichomonas vaginalis G3
          Length = 598

 Score =  246 bits (603), Expect = 9e-64
 Identities = 117/206 (56%), Positives = 154/206 (74%)
 Frame = +3

Query: 111 QGKNLVGVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVASE 290
           +G +L+G+A+TGSGKT A+++PA+VHI  Q P+ RGDGPI LVL+PTRELAQQI +VA  
Sbjct: 161 KGHDLIGIAKTGSGKTAAFLIPAMVHIGLQEPMYRGDGPIVLVLSPTRELAQQIAEVAKG 220

Query: 291 FGNSSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDE 470
           F ++  +R TC+FGGA +  QA DL     +V+ATPGRLIDF+E G   + R  +LVLDE
Sbjct: 221 FCDNLMIRQTCLFGGAGRGPQANDLRHLPSLVVATPGRLIDFIEGGQCPMNRVNFLVLDE 280

Query: 471 ADRMLDMGFEPQIRKIIDQIRPDRQTLMWSATWPKEVRKLAEDYLXDYVQINIGSLQLSA 650
           AD+MLDMGFEPQIRKII  I  DRQT+M+SATWPKE+++LA D+L D V + IG+  L+ 
Sbjct: 281 ADQMLDMGFEPQIRKIIGHISKDRQTMMFSATWPKEIQQLAADFLVDPVHMIIGNKDLTT 340

Query: 651 NHNILQIVDVCQEHEKENKLNVLLQE 728
           N NI Q++  C+E EK +K   +L E
Sbjct: 341 NSNIKQVITKCEEFEKLSKCLEVLNE 366


>UniRef50_Q4QIQ9 Cluster: ATP-dependent DEAD/H RNA helicase,
           putative; n=6; Trypanosomatidae|Rep: ATP-dependent
           DEAD/H RNA helicase, putative - Leishmania major
          Length = 502

 Score =  244 bits (598), Expect = 4e-63
 Identities = 119/211 (56%), Positives = 153/211 (72%), Gaps = 1/211 (0%)
 Frame = +3

Query: 105 LCQGKNLVGVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQ-QV 281
           L   +++VGVA+TGSGKT+A+++PA +HI  QPP++ GDGPIALVLAPTRELA QI+ + 
Sbjct: 179 LLNSRDIVGVAKTGSGKTMAFMIPAALHIMAQPPLQPGDGPIALVLAPTRELAVQIETET 238

Query: 282 ASEFGNSSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLV 461
                    +  TCV+GG PK  Q R L  GV + IATPGRLID LE   TNL R TYL 
Sbjct: 239 RKALTRVPSIMTTCVYGGTPKGPQQRALRAGVHVCIATPGRLIDLLETNCTNLLRVTYLT 298

Query: 462 LDEADRMLDMGFEPQIRKIIDQIRPDRQTLMWSATWPKEVRKLAEDYLXDYVQINIGSLQ 641
           LDEADRMLDMGFE QIRKI  QIR DRQTLM+SATWP+E+R LA  +  D+V+++IGS +
Sbjct: 299 LDEADRMLDMGFEDQIRKICSQIRTDRQTLMFSATWPREIRNLAASFQKDFVRVHIGSEE 358

Query: 642 LSANHNILQIVDVCQEHEKENKLNVLLQEIG 734
           L AN ++ Q V V + + KE K+  +L+++G
Sbjct: 359 LVANADVHQHVFVVEGYHKEEKMEEILRQVG 389


>UniRef50_UPI00004988F8 Cluster: DEAD/DEAH box helicase; n=1;
           Entamoeba histolytica HM-1:IMSS|Rep: DEAD/DEAH box
           helicase - Entamoeba histolytica HM-1:IMSS
          Length = 535

 Score =  242 bits (593), Expect = 1e-62
 Identities = 104/211 (49%), Positives = 159/211 (75%)
 Frame = +3

Query: 111 QGKNLVGVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVASE 290
           QGK++VG+A+TGSGKT+++++PAI+HI + P  +  +GP  L+LAPTREL  QI   A +
Sbjct: 189 QGKDVVGIAETGSGKTISFLIPAIIHILDTPLAQYREGPRVLILAPTRELVCQIADEAIK 248

Query: 291 FGNSSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDE 470
           F   + ++    FGG P+  Q +D + G +I +ATPGRLIDF+++G T+L RCT+L+LDE
Sbjct: 249 FTKGTAIKTVRCFGGVPQSSQMKDFQSGCDICVATPGRLIDFIKRGVTSLSRCTFLILDE 308

Query: 471 ADRMLDMGFEPQIRKIIDQIRPDRQTLMWSATWPKEVRKLAEDYLXDYVQINIGSLQLSA 650
           ADRML+MGFE Q++ II QIRPDRQT+MW+ATWP+ +++ A  ++   +QINIG+  L A
Sbjct: 309 ADRMLEMGFEVQVQDIIGQIRPDRQTVMWTATWPQAIQQFALGFMFHPLQINIGNPDLHA 368

Query: 651 NHNILQIVDVCQEHEKENKLNVLLQEIGQNQ 743
           N ++ QI++VCQE ++++K+N +++ IG  +
Sbjct: 369 NESVKQIIEVCQERDRDSKMNEIVKRIGSEK 399



 Score = 34.7 bits (76), Expect = 6.3
 Identities = 17/52 (32%), Positives = 23/52 (44%)
 Frame = +2

Query: 755 KTIIFVETKRKAXXXXXXXXXYGWPAVCMHXDKHSKKGMKXFXNFKEGRFQY 910
           K +IFV+TKR A           +   CMH DK   +  +   +FK G   Y
Sbjct: 400 KVLIFVKTKRSADNLCYKLRDQRYRVACMHGDKVQAERDRALSDFKSGAVNY 451


>UniRef50_Q26696 Cluster: Putative DEAD-box RNA helicase HEL64; n=6;
           Trypanosomatidae|Rep: Putative DEAD-box RNA helicase
           HEL64 - Trypanosoma brucei brucei
          Length = 568

 Score =  242 bits (593), Expect = 1e-62
 Identities = 117/208 (56%), Positives = 156/208 (75%)
 Frame = +3

Query: 105 LCQGKNLVGVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVA 284
           L  G++LVGVA+TGSGKTL +++PA+ HI  Q P+R GDGP+ +VLAPTRELAQQI++  
Sbjct: 136 LLSGRDLVGVAKTGSGKTLGFMVPALAHIAVQEPLRSGDGPMVVVLAPTRELAQQIEEET 195

Query: 285 SEFGNSSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVL 464
            +      V   CV+GGAPK  Q   L RGV I++ATPGRLIDFL+    NL R TYLVL
Sbjct: 196 KKVIPGD-VYCGCVYGGAPKGPQLGLLRRGVHILVATPGRLIDFLDIKRINLHRVTYLVL 254

Query: 465 DEADRMLDMGFEPQIRKIIDQIRPDRQTLMWSATWPKEVRKLAEDYLXDYVQINIGSLQL 644
           DEADRMLDMGFEPQ+RKI  QIRPDRQT+M+SATWP+E+++LA ++   +++I++GS +L
Sbjct: 255 DEADRMLDMGFEPQVRKICGQIRPDRQTVMFSATWPREIQRLAAEFQKQWIRISVGSTEL 314

Query: 645 SANHNILQIVDVCQEHEKENKLNVLLQE 728
            AN ++ Q   + QE  K+++L  L+QE
Sbjct: 315 QANKDVTQRFILTQEFAKQDELRKLMQE 342


>UniRef50_Q5VQL1-2 Cluster: Isoform 2 of Q5VQL1 ; n=2;
           Magnoliophyta|Rep: Isoform 2 of Q5VQL1 - Oryza sativa
           subsp. japonica (Rice)
          Length = 759

 Score =  239 bits (586), Expect = 1e-61
 Identities = 121/225 (53%), Positives = 160/225 (71%), Gaps = 1/225 (0%)
 Frame = +3

Query: 111 QGKNLVGVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVASE 290
           + +++V VA+TGSGKTL Y++P  + +       R DGP  LVL+PTRELA QIQ  A +
Sbjct: 267 RNRDIVAVAKTGSGKTLGYLIPGFILLKRLQHNSR-DGPTVLVLSPTRELATQIQDEAKK 325

Query: 291 FGNSSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDE 470
           FG SS + + C++GGAPK  Q RDLERG +IV+ATPGRL D LE    +L + +YLVLDE
Sbjct: 326 FGRSSRISSVCLYGGAPKGPQLRDLERGADIVVATPGRLNDILEMRRVSLHQVSYLVLDE 385

Query: 471 ADRMLDMGFEPQIRKIIDQIRPDRQTLMWSATWPKEVRKLAEDYLXDYVQINIGSL-QLS 647
           ADRMLDMGFEPQIRKI+ Q++P RQTLM++ATWPKEVRK+A D L + VQ+NIG+  QL 
Sbjct: 386 ADRMLDMGFEPQIRKIVKQVQPKRQTLMFTATWPKEVRKIASDLLSNPVQVNIGNTDQLV 445

Query: 648 ANHNILQIVDVCQEHEKENKLNVLLQEIGQNQDPGARPLYLLKLK 782
           AN +I Q VDV    EK  +L+ +L    ++Q+PG++ +     K
Sbjct: 446 ANKSITQYVDVITPPEKSRRLDQIL----RSQEPGSKIIIFCSTK 486


>UniRef50_Q9SWV9 Cluster: Ethylene-responsive RNA helicase; n=5;
           Eukaryota|Rep: Ethylene-responsive RNA helicase -
           Solanum lycopersicum (Tomato) (Lycopersicon esculentum)
          Length = 474

 Score =  235 bits (575), Expect = 2e-60
 Identities = 111/161 (68%), Positives = 133/161 (82%)
 Frame = +3

Query: 111 QGKNLVGVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVASE 290
           +G++L+G+A+TGSGKT+AY+LPAIVH+N QP +  GDGPI LVLAPTRELA QIQQ A++
Sbjct: 132 KGRDLIGIAETGSGKTIAYLLPAIVHVNAQPILDHGDGPIVLVLAPTRELAVQIQQEATK 191

Query: 291 FGNSSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDE 470
           FG SS ++NTC++GG PK  Q RDL++GVEIVIATPGRLID LE   TNL+R T +VLDE
Sbjct: 192 FGASSRIKNTCIYGGVPKGPQVRDLQKGVEIVIATPGRLIDMLESNHTNLRRVT-IVLDE 250

Query: 471 ADRMLDMGFEPQIRKIIDQIRPDRQTLMWSATWPKEVRKLA 593
           ADRMLDMGFEPQIRK I    PDRQTL WSATWPK V  ++
Sbjct: 251 ADRMLDMGFEPQIRKCISD-TPDRQTLYWSATWPKNVNHVS 290


>UniRef50_A2WLP5 Cluster: Putative uncharacterized protein; n=3;
           Magnoliophyta|Rep: Putative uncharacterized protein -
           Oryza sativa subsp. indica (Rice)
          Length = 523

 Score =  235 bits (574), Expect = 3e-60
 Identities = 124/207 (59%), Positives = 150/207 (72%)
 Frame = +3

Query: 111 QGKNLVGVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVASE 290
           +G++L+G+A+TGSGKTLAY+LPAIVH+N QP +  GDGPI LVLAPTRELA QIQQ A++
Sbjct: 129 RGRDLIGIAETGSGKTLAYLLPAIVHVNAQPILAPGDGPIVLVLAPTRELAVQIQQEATK 188

Query: 291 FGNSSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDE 470
           FG                          VEIVIATPGRLID +E   TNL+R TYLVLDE
Sbjct: 189 FG--------------------------VEIVIATPGRLIDMIESHHTNLRRITYLVLDE 222

Query: 471 ADRMLDMGFEPQIRKIIDQIRPDRQTLMWSATWPKEVRKLAEDYLXDYVQINIGSLQLSA 650
           ADRMLDMGFEPQI+KI+ QIRPDRQTL WSATWPKEV +LA ++L D  ++ IGS +L A
Sbjct: 223 ADRMLDMGFEPQIKKIVSQIRPDRQTLYWSATWPKEVEQLARNFLFDPYKVIIGSEELKA 282

Query: 651 NHNILQIVDVCQEHEKENKLNVLLQEI 731
           NH I Q V++  E +K NKL  LL++I
Sbjct: 283 NHAISQHVEILSESQKYNKLVNLLEDI 309


>UniRef50_Q5JKF2 Cluster: DEAD-box ATP-dependent RNA helicase 40;
           n=8; Magnoliophyta|Rep: DEAD-box ATP-dependent RNA
           helicase 40 - Oryza sativa subsp. japonica (Rice)
          Length = 792

 Score =  231 bits (566), Expect = 3e-59
 Identities = 125/246 (50%), Positives = 167/246 (67%), Gaps = 1/246 (0%)
 Frame = +3

Query: 48  IPRAAGNSARGTGSRXGQSLCQGKNLVGVAQTGSGKTLAYILPAIVHINNQPPIRRGDGP 227
           I RA  +S     ++      Q +++V +A+TGSGKTL Y+LP  +HI       R  GP
Sbjct: 165 IQRAGFSSPTPIQAQSWPIALQCQDVVAIAKTGSGKTLGYLLPGFMHIKRLQNNPRS-GP 223

Query: 228 IALVLAPTRELAQQIQQVASEFGNSSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRL 407
             LVLAPTRELA QI + A +FG SS + +TC++GGAPK  Q RDL+RGV++V+ATPGRL
Sbjct: 224 TVLVLAPTRELATQILEEAVKFGRSSRISSTCLYGGAPKGPQLRDLDRGVDVVVATPGRL 283

Query: 408 IDFLEKGTTNLQRCTYLVLDEADRMLDMGFEPQIRKIIDQIRPDRQTLMWSATWPKEVRK 587
            D LE    +L++ +YLVLDEADRMLDMGFEPQIRKI+ +I P RQTLM++ATWPKEVR+
Sbjct: 284 NDILEMRRISLKQVSYLVLDEADRMLDMGFEPQIRKIVKEIPPRRQTLMYTATWPKEVRR 343

Query: 588 LAEDYLXDYVQINIGSL-QLSANHNILQIVDVCQEHEKENKLNVLLQEIGQNQDPGARPL 764
           +AED L   VQ+ IGS+ +L AN  I Q V++    EK  +    L++I ++QD G++ L
Sbjct: 344 IAEDLLVHPVQVTIGSVDELVANSAITQNVELITPSEKLRR----LEQILRSQDSGSKVL 399

Query: 765 YLLKLK 782
                K
Sbjct: 400 IFCTTK 405


>UniRef50_Q7QA96 Cluster: ENSANGP00000013118; n=5; Eumetazoa|Rep:
           ENSANGP00000013118 - Anopheles gambiae str. PEST
          Length = 512

 Score =  230 bits (562), Expect = 8e-59
 Identities = 106/211 (50%), Positives = 157/211 (74%), Gaps = 2/211 (0%)
 Frame = +3

Query: 105 LCQGKNLVGVAQTGSGKTLAYILPAIVHINNQPPIRRGD--GPIALVLAPTRELAQQIQQ 278
           L +G++L+G+AQTG+GKTLA++LPA++HI  QP I RG+  GP  LVLAPTRELA QI++
Sbjct: 140 LLRGEDLIGIAQTGTGKTLAFLLPALIHIEGQP-IPRGERGGPNVLVLAPTRELALQIEK 198

Query: 279 VASEFGNSSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYL 458
             +++     ++  C++GG  +R Q   +  GVEI+IATPGRL D +++G  ++   TYL
Sbjct: 199 EVAKYQFRG-IKAVCLYGGGDRRAQINVVRNGVEILIATPGRLNDLVQEGVVDVSTITYL 257

Query: 459 VLDEADRMLDMGFEPQIRKIIDQIRPDRQTLMWSATWPKEVRKLAEDYLXDYVQINIGSL 638
           +LDEADRMLDMGFEPQIRK++  +RPDRQT+M SATWP  VR+LA+ Y+ D +Q+ IG+L
Sbjct: 258 ILDEADRMLDMGFEPQIRKVLLDVRPDRQTVMTSATWPDGVRRLAQSYMHDPIQVYIGTL 317

Query: 639 QLSANHNILQIVDVCQEHEKENKLNVLLQEI 731
            L+A H + Q+++V  E +K  ++N  ++++
Sbjct: 318 DLAATHTVTQVIEVMDEEDKFQRINEFVRDM 348


>UniRef50_Q9SQV1 Cluster: Probable DEAD-box ATP-dependent RNA helicase
            40; n=2; core eudicotyledons|Rep: Probable DEAD-box
            ATP-dependent RNA helicase 40 - Arabidopsis thaliana
            (Mouse-ear cress)
          Length = 1088

 Score =  229 bits (561), Expect = 1e-58
 Identities = 114/206 (55%), Positives = 152/206 (73%), Gaps = 1/206 (0%)
 Frame = +3

Query: 111  QGKNLVGVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVASE 290
            Q +++V +A+TGSGKTL Y++PA + + +     R +GP  L+LAPTRELA QIQ  A  
Sbjct: 471  QSRDIVAIAKTGSGKTLGYLIPAFILLRHCRNDSR-NGPTVLILAPTRELATQIQDEALR 529

Query: 291  FGNSSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDE 470
            FG SS +  TC++GGAPK  Q ++LERG +IV+ATPGRL D LE    + Q+ + LVLDE
Sbjct: 530  FGRSSRISCTCLYGGAPKGPQLKELERGADIVVATPGRLNDILEMKMIDFQQVSLLVLDE 589

Query: 471  ADRMLDMGFEPQIRKIIDQIRPDRQTLMWSATWPKEVRKLAEDYLXDYVQINIGSL-QLS 647
            ADRMLDMGFEPQIRKI+++I P RQTLM++ATWPKEVRK+A D L + VQ+NIG + +L+
Sbjct: 590  ADRMLDMGFEPQIRKIVNEIPPRRQTLMYTATWPKEVRKIASDLLVNPVQVNIGRVDELA 649

Query: 648  ANHNILQIVDVCQEHEKENKLNVLLQ 725
            AN  I Q V+V  + EKE +L  +L+
Sbjct: 650  ANKAITQYVEVVPQMEKERRLEQILR 675


>UniRef50_Q9LYJ9 Cluster: DEAD-box ATP-dependent RNA helicase 46;
           n=16; Eukaryota|Rep: DEAD-box ATP-dependent RNA helicase
           46 - Arabidopsis thaliana (Mouse-ear cress)
          Length = 645

 Score =  225 bits (550), Expect = 2e-57
 Identities = 113/225 (50%), Positives = 160/225 (71%), Gaps = 1/225 (0%)
 Frame = +3

Query: 111 QGKNLVGVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVASE 290
           Q +++V +A+TGSGKTL Y++P  +H+       R  GP  LVL+PTRELA QIQ  A +
Sbjct: 197 QNRDIVAIAKTGSGKTLGYLIPGFMHLQRIHNDSRM-GPTILVLSPTRELATQIQVEALK 255

Query: 291 FGNSSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDE 470
           FG SS +   C++GGAPK  Q +++ERGV+IV+ATPGRL D LE    +L + +YLVLDE
Sbjct: 256 FGKSSKISCACLYGGAPKGPQLKEIERGVDIVVATPGRLNDILEMKRISLHQVSYLVLDE 315

Query: 471 ADRMLDMGFEPQIRKIIDQIRPDRQTLMWSATWPKEVRKLAEDYLXDYVQINIGSL-QLS 647
           ADRMLDMGFEPQIRKI++++   RQTLM++ATWPKEVRK+A D L +  Q+NIG++ +L 
Sbjct: 316 ADRMLDMGFEPQIRKIVNEVPTKRQTLMYTATWPKEVRKIAADLLVNPAQVNIGNVDELV 375

Query: 648 ANHNILQIVDVCQEHEKENKLNVLLQEIGQNQDPGARPLYLLKLK 782
           AN +I Q ++V    EK ++    L++I ++Q+PG++ +     K
Sbjct: 376 ANKSITQTIEVLAPMEKHSR----LEQILRSQEPGSKIIIFCSTK 416


>UniRef50_Q4MYL1 Cluster: ATP-dependent RNA helicase, putative; n=3;
           Piroplasmida|Rep: ATP-dependent RNA helicase, putative -
           Theileria parva
          Length = 707

 Score =  225 bits (549), Expect = 3e-57
 Identities = 106/204 (51%), Positives = 147/204 (72%), Gaps = 1/204 (0%)
 Frame = +3

Query: 102 SLCQGKNLVGVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQV 281
           S   G++++GV+QTGSGKTL ++LP ++H+  QPP+  G GPI L+L+PTREL  QI + 
Sbjct: 352 SCLTGRDIIGVSQTGSGKTLTFLLPGLLHLLAQPPVGTG-GPIMLILSPTRELCLQIAEE 410

Query: 282 ASEFGNSSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLV 461
           A  +     +R   ++GGA K  Q R+L+ G EI++ATPGRL++FL  GT  L R +Y V
Sbjct: 411 ARPYSRLLNLRLVPIYGGASKFAQVRELQNGAEIMVATPGRLLEFLSNGTIKLNRVSYFV 470

Query: 462 LDEADRMLDMGFEPQIRKIIDQIRPDRQTLMWSATWPKEVRKLAEDYL-XDYVQINIGSL 638
           +DEADRMLDMGFEPQIRKI+ QIRPDRQTLM+SATWP E+++LA ++   + + I +G L
Sbjct: 471 MDEADRMLDMGFEPQIRKIVGQIRPDRQTLMFSATWPSEIKRLASEFCKANSIYIQVGDL 530

Query: 639 QLSANHNILQIVDVCQEHEKENKL 710
           +L+AN NI Q V+    +E  +KL
Sbjct: 531 ELTANPNIRQNVEFPNSYEVRDKL 554


>UniRef50_A2ED04 Cluster: DEAD/DEAH box helicase family protein;
           n=1; Trichomonas vaginalis G3|Rep: DEAD/DEAH box
           helicase family protein - Trichomonas vaginalis G3
          Length = 521

 Score =  222 bits (543), Expect = 2e-56
 Identities = 125/297 (42%), Positives = 177/297 (59%), Gaps = 4/297 (1%)
 Frame = +3

Query: 111 QGKNLVGVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVASE 290
           +G ++VG+A+TGSGKT ++++PA++HI+ Q  I   DGPI LVL+PTRELA Q  +VA++
Sbjct: 121 KGNDMVGIAKTGSGKTASFLIPALMHISAQRKISENDGPIVLVLSPTRELALQTDEVAAQ 180

Query: 291 FGNSSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDE 470
           F      ++ C++GG  +  Q   L    EIV ATPGRLIDFL+ G  N  R  +LVLDE
Sbjct: 181 FCVKMGYKHVCIYGGEDRHRQINKLRFHPEIVTATPGRLIDFLQSGVFNPNRANFLVLDE 240

Query: 471 ADRMLDMGFEPQIRKIIDQIRPDRQTLMWSATWPKEVRKLAEDYLXDYVQINIGSLQLSA 650
           ADRMLDMGFEPQIR II  +  DR+T M+SATWPKE+R+LA D+L + + +++G  +L+ 
Sbjct: 241 ADRMLDMGFEPQIRAIIASLTKDRETFMFSATWPKEIRQLASDFLSNPIHMHVGGEELAT 300

Query: 651 NHNILQIVDVCQEHEKENKLNVLLQEIGQNQDPGARPLYLLKLKEKRXTXPEISDDMDGQ 830
           N  I Q V + QEHEK  K   +L+E   NQ        ++  K KR T  ++SD +  +
Sbjct: 301 NERIQQNVLLLQEHEKGEKCVEILKE---NQS----KKIIIFAKTKR-TVQQLSDFLKSK 352

Query: 831 LCACTXTNTARKG*SXXPILKRV----VSSILVATDVGCXRS*CGMGSNFXINFDXP 989
              C   +  +        L +        +LVATDV   R       +  +N+D P
Sbjct: 353 SIRCLSIHGDKTQQERVVALDKFKNARTGGVLVATDVAA-RGLDVTDIDLVLNYDFP 408


>UniRef50_A4S3A0 Cluster: Predicted protein; n=2; Ostreococcus|Rep:
           Predicted protein - Ostreococcus lucimarinus CCE9901
          Length = 440

 Score =  222 bits (542), Expect = 2e-56
 Identities = 120/278 (43%), Positives = 174/278 (62%), Gaps = 3/278 (1%)
 Frame = +3

Query: 105 LCQGKNLVGVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVA 284
           +  G ++VG+A TGSGKTLA+ +PA+  I++QPP + G  PI LVLAPTRELAQQ  +V 
Sbjct: 61  IMSGHDMVGIAATGSGKTLAFGMPALTQIHSQPPCKPGQ-PICLVLAPTRELAQQTAKVF 119

Query: 285 SEFGNSSYVRNTCVFGGAPKREQARDLERG--VEIVIATPGRLIDFLEKGTTNLQRCTYL 458
            + G +S VR  CV+GGAPK EQ   ++ G    +++ATPGRL DF+E+G   L R T L
Sbjct: 120 DDAGEASGVRCVCVYGGAPKYEQKAQMKAGGGAAVIVATPGRLRDFMEEGVIKLDRVTML 179

Query: 459 VLDEADRMLDMGFEPQIRKIIDQIRPDRQTLMWSATWPKEVRKLAEDYLXDYVQINIGSL 638
           VLDEADRMLD+GFEP+IR I    R DRQT+M+SATWP+ V+ LA +++ + +++ IG+ 
Sbjct: 180 VLDEADRMLDLGFEPEIRAIAGATRADRQTVMFSATWPQSVQSLASEFMCNPIKVRIGAE 239

Query: 639 QLSANHNILQIVDVCQEHEKENKL-NVLLQEIGQNQDPGARPLYLLKLKEKRXTXPEISD 815
            L A+ +I QIV+V +  +K+  L  V+ Q +G+ ++     ++ L  KE       +S 
Sbjct: 240 GLKASQSITQIVEVVEPQDKDRHLARVMKQYLGKGKEVPRTLIFGLYKKECANLHQRLSR 299

Query: 816 DMDGQLCACTXTNTARKG*SXXPILKRVVSSILVATDV 929
           +          +   R+        K+  S IL+ATDV
Sbjct: 300 EWPAVCIHGDMSQHDRE--KSVDAFKKGTSRILIATDV 335


>UniRef50_Q9LKL6 Cluster: DEAD box protein P68; n=5;
            Viridiplantae|Rep: DEAD box protein P68 - Pisum sativum
            (Garden pea)
          Length = 622

 Score =  217 bits (531), Expect = 5e-55
 Identities = 126/297 (42%), Positives = 178/297 (59%), Gaps = 5/297 (1%)
 Frame = +3

Query: 114  GKNLVGVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVASEF 293
            G++L+G A+TGSGKT A+ +P + H   QPPIRRGDGP+ALVLAPTRELAQQI++    F
Sbjct: 155  GRDLLGCAETGSGKTAAFTIPMLQHCLVQPPIRRGDGPLALVLAPTRELAQQIEKEVQAF 214

Query: 294  GNS-SYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDE 470
              S   ++N  V GG    +Q  +L  GVEI +ATPGR ID L++G T+L R +Y+VLDE
Sbjct: 215  SRSLESLKNCIVVGGTNIEKQRSELRAGVEIAVATPGRFIDHLQQGNTSLSRISYVVLDE 274

Query: 471  ADRMLDMGFEPQIRKIIDQIRPDRQTLMWSATWPKEVRKLAEDYLXDYVQINIGSLQLSA 650
            ADRMLDMGFEPQIR+I+  +    QTL++SAT P E+  LA++YL + VQ+ +G +  S 
Sbjct: 275  ADRMLDMGFEPQIREIMRSLPEKHQTLLFSATMPVEIEALAKEYLANPVQVKVGKVS-SP 333

Query: 651  NHNILQ-IVDVCQEHEKENKLNVLLQEIGQNQDPGARPLYLLKLKEKRXTXPEISDDMDG 827
              N+ Q +V V    + +  L++L++E  Q +  G R    +   E++    E+++ +  
Sbjct: 334  TTNVSQTLVKVSGSEKIDRLLDLLVEEASQAEKCGHRFPLTIVFVERKTRCDEVAEALVA 393

Query: 828  QLCACTXTNTARKG*SXXPILKRVVS---SILVATDVGCXRS*CGMGSNFXINFDXP 989
            Q  +    +           L+   S   SILVATDV   R     G +  IN D P
Sbjct: 394  QGLSAVSLHGGHSQNEREAALQNFRSSSTSILVATDV-ASRGLDVTGVSHVINLDLP 449


>UniRef50_Q9P7C7 Cluster: Pre-mRNA-processing ATP-dependent RNA
            helicase prp11; n=1; Schizosaccharomyces pombe|Rep:
            Pre-mRNA-processing ATP-dependent RNA helicase prp11 -
            Schizosaccharomyces pombe (Fission yeast)
          Length = 1014

 Score =  217 bits (530), Expect = 6e-55
 Identities = 106/217 (48%), Positives = 150/217 (69%), Gaps = 3/217 (1%)
 Frame = +3

Query: 102  SLCQGKNLVGVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQV 281
            ++  G++++GVA+TGSGKT+A++LP   HI +Q P++ G+GPIA+++ PTRELA QI + 
Sbjct: 451  AITSGRDVIGVAKTGSGKTIAFLLPMFRHIKDQRPLKTGEGPIAIIMTPTRELAVQIFRE 510

Query: 282  ASEFGNSSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKG---TTNLQRCT 452
               F     +R  C +GGAP ++Q  DL+RG EIV+ TPGR+ID L       TNL RCT
Sbjct: 511  CKPFLKLLNIRACCAYGGAPIKDQIADLKRGAEIVVCTPGRMIDVLSANAGRVTNLHRCT 570

Query: 453  YLVLDEADRMLDMGFEPQIRKIIDQIRPDRQTLMWSATWPKEVRKLAEDYLXDYVQINIG 632
            YLVLDEADRM D+GFEPQ+ +II+ IRPDRQT+++SAT+P+ +  LA   L   V+I +G
Sbjct: 571  YLVLDEADRMFDLGFEPQVMRIINNIRPDRQTVLFSATFPRAMEALARKVLKKPVEITVG 630

Query: 633  SLQLSANHNILQIVDVCQEHEKENKLNVLLQEIGQNQ 743
               + A+  + QIV+V  E  K ++L  LL E+  NQ
Sbjct: 631  GRSVVAS-EVEQIVEVRPEESKFSRLLELLGELYNNQ 666


>UniRef50_A7RY08 Cluster: Predicted protein; n=2; Eukaryota|Rep:
           Predicted protein - Nematostella vectensis
          Length = 518

 Score =  216 bits (528), Expect = 1e-54
 Identities = 103/189 (54%), Positives = 136/189 (71%)
 Frame = +3

Query: 114 GKNLVGVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVASEF 293
           G++++G+A+TGSGKT A++ PA+VHI +QP ++ GDGPI L+ APTREL QQI   A  F
Sbjct: 143 GRDIIGIAKTGSGKTAAFLWPALVHIMDQPELQVGDGPIVLICAPTRELCQQIYTEARRF 202

Query: 294 GNSSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEA 473
           G +  +    VFGG  K EQ++ L+ G EIV+ATPGRLID ++   TNL R TYLV DEA
Sbjct: 203 GKAYNIHVVAVFGGGNKYEQSKALQEGAEIVVATPGRLIDHVKAKATNLHRVTYLVFDEA 262

Query: 474 DRMLDMGFEPQIRKIIDQIRPDRQTLMWSATWPKEVRKLAEDYLXDYVQINIGSLQLSAN 653
           DRM DMGFEPQ+R I + +RPDRQTL++SAT+ K+V  L  D L D V++ IG L   AN
Sbjct: 263 DRMFDMGFEPQVRSIANNVRPDRQTLLFSATFKKKVEHLCRDILVDPVRVVIGELG-EAN 321

Query: 654 HNILQIVDV 680
            ++ QIV +
Sbjct: 322 EDVTQIVHI 330


>UniRef50_A0C015 Cluster: Chromosome undetermined scaffold_14, whole
           genome shotgun sequence; n=3; Paramecium
           tetraurelia|Rep: Chromosome undetermined scaffold_14,
           whole genome shotgun sequence - Paramecium tetraurelia
          Length = 532

 Score =  216 bits (528), Expect = 1e-54
 Identities = 110/215 (51%), Positives = 148/215 (68%), Gaps = 1/215 (0%)
 Frame = +3

Query: 105 LCQGKNLVGVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVA 284
           +  G +L+G+AQTGSGKT+AY+LP +VHI +Q   R+  GP+ L+L PTRELA QIQ+  
Sbjct: 105 IMSGHDLIGIAQTGSGKTIAYLLPGLVHIESQ---RKKGGPMMLILVPTRELAMQIQEHI 161

Query: 285 SEFGNSSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVL 464
           S F  +  + + C++GGA KR Q   L R  +IV+ATPGRLIDFL+   TNL   TYLVL
Sbjct: 162 SYFSEAYNMNSACIYGGADKRPQEMALARDPDIVVATPGRLIDFLDAQVTNLHNVTYLVL 221

Query: 465 DEADRMLDMGFEPQIRKIIDQIRPDRQTLMWSATWPKEVRKLAEDYL-XDYVQINIGSLQ 641
           DEADRMLDMGFE Q+RKI   IR DRQT+ +SATWPK V+ LA D    + + + IGS +
Sbjct: 222 DEADRMLDMGFEQQVRKIDSYIREDRQTVFFSATWPKTVQNLACDLCHNEPINLYIGSQE 281

Query: 642 LSANHNILQIVDVCQEHEKENKLNVLLQEIGQNQD 746
           ++ N NI Q      ++EK+ +L  +L+E+  N+D
Sbjct: 282 VTINKNITQETICLYQNEKQEELLYILEEL-SNKD 315


>UniRef50_O22907 Cluster: DEAD-box ATP-dependent RNA helicase 24; n=7;
            Magnoliophyta|Rep: DEAD-box ATP-dependent RNA helicase 24
            - Arabidopsis thaliana (Mouse-ear cress)
          Length = 760

 Score =  215 bits (525), Expect = 2e-54
 Identities = 118/275 (42%), Positives = 173/275 (62%), Gaps = 3/275 (1%)
 Frame = +3

Query: 114  GKNLVGVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVASEF 293
            G++++G+A+TGSGKT A++LP IVHI +QP ++R +GPI ++ APTRELA QI   A +F
Sbjct: 265  GRDVIGIAKTGSGKTAAFVLPMIVHIMDQPELQRDEGPIGVICAPTRELAHQIFLEAKKF 324

Query: 294  GNSSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEA 473
              +  +R + V+GG  K EQ ++L+ G EIV+ATPGRLID L+     + R +YLVLDEA
Sbjct: 325  SKAYGLRVSAVYGGMSKHEQFKELKAGCEIVVATPGRLIDMLKMKALTMMRASYLVLDEA 384

Query: 474  DRMLDMGFEPQIRKIIDQIRPDRQTLMWSATWPKEVRKLAEDYLXDYVQINIGSLQLSAN 653
            DRM D+GFEPQ+R I+ QIRPDRQTL++SAT P +V KLA + L D +++ +G + + AN
Sbjct: 385  DRMFDLGFEPQVRSIVGQIRPDRQTLLFSATMPWKVEKLAREILSDPIRVTVGEVGM-AN 443

Query: 654  HNILQIVDVCQEHEKENKLNVLLQEIGQNQDPGARPLYLLKLKEKRXTXPEISDDMDGQL 833
             +I Q+V+V     +  KL  LL+++    D G     +L    K+ T  EI   +    
Sbjct: 444  EDITQVVNVIPSDAE--KLPWLLEKLPGMIDEGD----VLVFASKKATVDEIEAQLTLNS 497

Query: 834  CACTXTNTARKG*SXXPILKRV---VSSILVATDV 929
                  +  +   S    L++    V  +L+ATDV
Sbjct: 498  FKVAALHGDKDQASRMETLQKFKSGVHHVLIATDV 532


>UniRef50_Q16T16 Cluster: DEAD box ATP-dependent RNA helicase; n=7;
           Bilateria|Rep: DEAD box ATP-dependent RNA helicase -
           Aedes aegypti (Yellowfever mosquito)
          Length = 741

 Score =  215 bits (524), Expect = 3e-54
 Identities = 104/213 (48%), Positives = 150/213 (70%), Gaps = 3/213 (1%)
 Frame = +3

Query: 105 LCQGKNLVGVAQTGSGKTLAYILPAIVHINNQPPIRRGD---GPIALVLAPTRELAQQIQ 275
           L +G++L+G+AQTG+GKTLA++LPA +HI  QP + RG+   GP  LV+APTRELA QI+
Sbjct: 357 LLKGEDLIGIAQTGTGKTLAFLLPAFIHIEGQP-VPRGEARGGPNVLVMAPTRELALQIE 415

Query: 276 QVASEFGNSSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTY 455
           +   ++     ++  C++GG  +R Q   ++ GVEI+IATPGRL D +     ++   TY
Sbjct: 416 KEVFKYQFRD-IKAICLYGGGDRRTQINKVKGGVEIIIATPGRLNDLVAANVIDITSITY 474

Query: 456 LVLDEADRMLDMGFEPQIRKIIDQIRPDRQTLMWSATWPKEVRKLAEDYLXDYVQINIGS 635
           LVLDEADRMLDMGFEPQIRK++  IRPDRQT+M SATWP  VR+LA+ Y+ + VQ+ +G+
Sbjct: 475 LVLDEADRMLDMGFEPQIRKLLLDIRPDRQTIMTSATWPPGVRRLAQSYMSNPVQVYVGT 534

Query: 636 LQLSANHNILQIVDVCQEHEKENKLNVLLQEIG 734
           L L+A H + Q ++V  E +K  ++   +  +G
Sbjct: 535 LDLAATHTVTQQIEVIDEEDKYMRVMNFVTNMG 567


>UniRef50_Q4IP34 Cluster: Pre-mRNA-processing ATP-dependent RNA
            helicase PRP5; n=15; Pezizomycotina|Rep:
            Pre-mRNA-processing ATP-dependent RNA helicase PRP5 -
            Gibberella zeae (Fusarium graminearum)
          Length = 1227

 Score =  213 bits (519), Expect = 1e-53
 Identities = 107/232 (46%), Positives = 156/232 (67%), Gaps = 3/232 (1%)
 Frame = +3

Query: 102  SLCQGKNLVGVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQV 281
            +L  G++++GVA+TGSGKT+A++LP   HI +QPP++  DGPI L++ PTRELA QI + 
Sbjct: 630  ALMSGRDVIGVAKTGSGKTVAFLLPMFRHIKDQPPLKDTDGPIGLIMTPTRELAVQIHKD 689

Query: 282  ASEFGNSSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFL---EKGTTNLQRCT 452
               F     +R  C +GGAP REQ  +L+RG EI++ TPGR+ID L   +   TNL+R T
Sbjct: 690  CKPFLKMMGLRAVCAYGGAPIREQIAELKRGAEIIVCTPGRMIDLLAANQGRVTNLKRVT 749

Query: 453  YLVLDEADRMLDMGFEPQIRKIIDQIRPDRQTLMWSATWPKEVRKLAEDYLXDYVQINIG 632
            Y+VLDEADRM DMGFEPQ+ KI   +RPDRQT+++SAT P+ +  L +  L + +++ +G
Sbjct: 750  YVVLDEADRMFDMGFEPQVMKIFANMRPDRQTILFSATMPRIIDSLTKKVLKNPIEVTVG 809

Query: 633  SLQLSANHNILQIVDVCQEHEKENKLNVLLQEIGQNQDPGARPLYLLKLKEK 788
               + A   I QIV+V  E  K +++  LL E+  ++D  AR L  ++ +EK
Sbjct: 810  GRSVVAK-EIEQIVEVRDEPSKFHRVLELLGEL-YDRDEDARTLIFVERQEK 859


>UniRef50_Q86XP3 Cluster: ATP-dependent RNA helicase DDX42; n=47;
           Coelomata|Rep: ATP-dependent RNA helicase DDX42 - Homo
           sapiens (Human)
          Length = 938

 Score =  212 bits (518), Expect = 2e-53
 Identities = 103/221 (46%), Positives = 149/221 (67%)
 Frame = +3

Query: 114 GKNLVGVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVASEF 293
           G++++G+A+TGSGKT A+I P ++HI +Q  +  GDGPIA+++ PTREL QQI      F
Sbjct: 290 GRDMIGIAKTGSGKTAAFIWPMLIHIMDQKELEPGDGPIAVIVCPTRELCQQIHAECKRF 349

Query: 294 GNSSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEA 473
           G +  +R+  V+GG    EQA+ L+ G EIV+ TPGRLID ++K  TNLQR +YLV DEA
Sbjct: 350 GKAYNLRSVAVYGGGSMWEQAKALQEGAEIVVCTPGRLIDHVKKKATNLQRVSYLVFDEA 409

Query: 474 DRMLDMGFEPQIRKIIDQIRPDRQTLMWSATWPKEVRKLAEDYLXDYVQINIGSLQLSAN 653
           DRM DMGFE Q+R I   +RPDRQTL++SAT+ K++ KLA D L D +++  G +   AN
Sbjct: 410 DRMFDMGFEYQVRSIASHVRPDRQTLLFSATFRKKIEKLARDILIDPIRVVQGDIG-EAN 468

Query: 654 HNILQIVDVCQEHEKENKLNVLLQEIGQNQDPGARPLYLLK 776
            ++ QIV++   H   +K N L + + +    G+  L++ K
Sbjct: 469 EDVTQIVEIL--HSGPSKWNWLTRRLVEFTSSGSVLLFVTK 507


>UniRef50_A0CUL6 Cluster: Chromosome undetermined scaffold_28, whole
           genome shotgun sequence; n=4; Paramecium
           tetraurelia|Rep: Chromosome undetermined scaffold_28,
           whole genome shotgun sequence - Paramecium tetraurelia
          Length = 604

 Score =  212 bits (517), Expect = 2e-53
 Identities = 108/201 (53%), Positives = 143/201 (71%), Gaps = 1/201 (0%)
 Frame = +3

Query: 114 GKNLVGVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVASEF 293
           G +L+G+AQTGSGKTLA++LPAIVHI  Q    R   P  L+LAPTREL  QI     +F
Sbjct: 171 GHDLIGIAQTGSGKTLAFLLPAIVHILAQA---RSHDPKCLILAPTRELTLQIYDQFQKF 227

Query: 294 GNSSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEA 473
              S +   C++GG  +  Q   L +G +I+IA PGRLID L++G T L++ ++LVLDEA
Sbjct: 228 SVGSQLYAACLYGGQDRYIQKSQLRKGPQILIACPGRLIDLLDQGCTTLKQVSFLVLDEA 287

Query: 474 DRMLDMGFEPQIRKIIDQIRPDRQTLMWSATWPKEVRKLAEDYL-XDYVQINIGSLQLSA 650
           DRMLDMGFEPQIRKI+DQIRP RQT+++SATWPKEV+KLA D+   + V I IG+++L++
Sbjct: 288 DRMLDMGFEPQIRKIVDQIRPQRQTMLFSATWPKEVQKLALDFCKQEPVHIQIGNVELTS 347

Query: 651 NHNILQIVDVCQEHEKENKLN 713
           N  I QIV V +  +K  + N
Sbjct: 348 NRMIKQIVYVMKAIDKNQRYN 368


>UniRef50_A6RW79 Cluster: Putative uncharacterized protein; n=1;
            Botryotinia fuckeliana B05.10|Rep: Putative
            uncharacterized protein - Botryotinia fuckeliana B05.10
          Length = 1151

 Score =  210 bits (514), Expect = 5e-53
 Identities = 108/232 (46%), Positives = 156/232 (67%), Gaps = 3/232 (1%)
 Frame = +3

Query: 102  SLCQGKNLVGVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQV 281
            ++  G++++GVA+TGSGKT+A++LP   HI +Q P++  DGPI L++ PTRELA QI + 
Sbjct: 587  AIMSGRDVIGVAKTGSGKTIAFLLPMFRHIRDQRPLKGSDGPIGLIMTPTRELATQIHKE 646

Query: 282  ASEFGNSSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGT---TNLQRCT 452
               F  +  +R  C +GGA  ++Q  DL+RG EI++ TPGR+I+ L   +   TNLQR T
Sbjct: 647  CKPFLKAMGLRAVCAYGGAIIKDQIADLKRGAEIIVCTPGRMIELLAANSGRVTNLQRVT 706

Query: 453  YLVLDEADRMLDMGFEPQIRKIIDQIRPDRQTLMWSATWPKEVRKLAEDYLXDYVQINIG 632
            Y+VLDEADRM DMGFEPQ+ K+ + IRP+RQT+++SAT P+ +  LA+  L   V+I +G
Sbjct: 707  YVVLDEADRMFDMGFEPQVMKVFNNIRPNRQTILFSATMPRIMDALAKKTLQSPVEIVVG 766

Query: 633  SLQLSANHNILQIVDVCQEHEKENKLNVLLQEIGQNQDPGARPLYLLKLKEK 788
               + A   I QIV+V +E EK ++L  LL E+  N D  AR L  +  +EK
Sbjct: 767  GRSVVA-PEITQIVEVREEKEKFHRLLELLGEL-YNTDEDARTLIFVDRQEK 816


>UniRef50_Q965K2 Cluster: Putative uncharacterized protein; n=2;
           Caenorhabditis|Rep: Putative uncharacterized protein -
           Caenorhabditis elegans
          Length = 970

 Score =  208 bits (508), Expect = 3e-52
 Identities = 103/210 (49%), Positives = 144/210 (68%), Gaps = 3/210 (1%)
 Frame = +3

Query: 102 SLCQGKNLVGVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQV 281
           S+  G++++G+A+TGSGKTLA++LP   HI +QP +  GDGPIA++LAPTRELA Q  + 
Sbjct: 337 SIMSGRDVIGIAKTGSGKTLAFLLPMFRHILDQPELEEGDGPIAVILAPTRELAMQTYKE 396

Query: 282 ASEFGNSSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGT---TNLQRCT 452
           A++F     ++  C +GG    EQ  DL+RG EIV+ TPGR+ID L   +   TNL+R T
Sbjct: 397 ANKFAKPLGLKVACTYGGVGISEQIADLKRGAEIVVCTPGRMIDVLAANSGKVTNLRRVT 456

Query: 453 YLVLDEADRMLDMGFEPQIRKIIDQIRPDRQTLMWSATWPKEVRKLAEDYLXDYVQINIG 632
           YLVLDEADRM D GFEPQI K+++ IRPD+QT+++SAT+P+ +  LA   L   V+I +G
Sbjct: 457 YLVLDEADRMFDKGFEPQIMKVVNNIRPDKQTVLFSATFPRHMEALARKVLDKPVEILVG 516

Query: 633 SLQLSANHNILQIVDVCQEHEKENKLNVLL 722
              +  + +I Q   +C EH+K  KL  LL
Sbjct: 517 GKSVVCS-DITQNAVICAEHQKFLKLLELL 545


>UniRef50_Q6BML1 Cluster: Pre-mRNA-processing ATP-dependent RNA
            helicase PRP5; n=4; Saccharomycetales|Rep:
            Pre-mRNA-processing ATP-dependent RNA helicase PRP5 -
            Debaryomyces hansenii (Yeast) (Torulaspora hansenii)
          Length = 913

 Score =  208 bits (508), Expect = 3e-52
 Identities = 115/306 (37%), Positives = 182/306 (59%), Gaps = 12/306 (3%)
 Frame = +3

Query: 102  SLCQGKNLVGVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQV 281
            ++  G++++GVA+TGSGKTL+++LP + HI +QPP+RRGDGPI L++ PTRELA QI + 
Sbjct: 350  AIMSGRDIIGVAKTGSGKTLSFVLPLLRHIQDQPPLRRGDGPIGLIMTPTRELALQIHKE 409

Query: 282  ASEFGNSSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGT---TNLQRCT 452
             + F     + + C FGG+    Q  +L++G +I++ TPGR+ID L   +   TNLQR T
Sbjct: 410  LNHFTKKLNISSCCCFGGSSIESQIAELKKGAQIIVGTPGRIIDLLAANSGRVTNLQRVT 469

Query: 453  YLVLDEADRMLDMGFEPQIRKIIDQIRPDRQTLMWSATWPKEVRKLAEDYLXDYVQINIG 632
            YLVLDEADRM DMGFEPQ+ K+  ++RPDRQT+++SAT+P+++  LA+  L + ++I +G
Sbjct: 470  YLVLDEADRMFDMGFEPQVTKVFTRVRPDRQTVLFSATFPRKMELLAKKILDNPMEIVVG 529

Query: 633  SLQLSANHNILQIVDVCQEHE----KENKLNVLLQEIGQNQDPGARPLYLLKLKEKRXTX 800
             + + A+  I Q V++ +  +    +E K + LL  +    D  A    +L   EK+   
Sbjct: 530  GISVVAS-EITQKVELFENEDDKSLEEAKFSKLLSTLNDYGDKDAE-CKILIFVEKQIAA 587

Query: 801  PEISDDMDGQLCACTXTNTARKG*SXXPILKRVVSS-----ILVATDVGCXRS*CGMGSN 965
             E+   +  +   C   +  +        ++   SS     IL+AT +   R     G N
Sbjct: 588  DELLVKLLTEKYPCLAIHGGKDQIDRKHAIREFSSSNSGVNILIATSIAA-RGLDVKGLN 646

Query: 966  FXINFD 983
              IN++
Sbjct: 647  LVINYE 652


>UniRef50_Q9SF41 Cluster: DEAD-box ATP-dependent RNA helicase 45;
            n=15; Eukaryota|Rep: DEAD-box ATP-dependent RNA helicase
            45 - Arabidopsis thaliana (Mouse-ear cress)
          Length = 989

 Score =  208 bits (507), Expect = 4e-52
 Identities = 104/211 (49%), Positives = 145/211 (68%), Gaps = 3/211 (1%)
 Frame = +3

Query: 105  LCQGKNLVGVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVA 284
            +  G++ +GVA+TGSGKTL ++LP + HI +QPP+  GDGPI LV+APTREL QQI    
Sbjct: 430  IMSGRDCIGVAKTGSGKTLGFVLPMLRHIKDQPPVEAGDGPIGLVMAPTRELVQQIYSDI 489

Query: 285  SEFGNSSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFL--EKG-TTNLQRCTY 455
             +F  +  +    V+GG+   +Q  +L+RG EIV+ TPGR+ID L    G  TNL+R TY
Sbjct: 490  RKFSKALGIICVPVYGGSGVAQQISELKRGTEIVVCTPGRMIDILCTSSGKITNLRRVTY 549

Query: 456  LVLDEADRMLDMGFEPQIRKIIDQIRPDRQTLMWSATWPKEVRKLAEDYLXDYVQINIGS 635
            LV+DEADRM DMGFEPQI +I+  IRPDRQT+++SAT+P++V  LA   L   V+I +G 
Sbjct: 550  LVMDEADRMFDMGFEPQITRIVQNIRPDRQTVLFSATFPRQVETLARKVLNKPVEIQVGG 609

Query: 636  LQLSANHNILQIVDVCQEHEKENKLNVLLQE 728
              +  N +I Q+V++  E E+ ++L  LL E
Sbjct: 610  RSV-VNKDITQLVEIRPESERFSRLLELLGE 639


>UniRef50_Q7K4L8 Cluster: LD33749p; n=1; Drosophila melanogaster|Rep:
            LD33749p - Drosophila melanogaster (Fruit fly)
          Length = 703

 Score =  207 bits (505), Expect = 7e-52
 Identities = 117/278 (42%), Positives = 166/278 (59%), Gaps = 3/278 (1%)
 Frame = +3

Query: 105  LCQGKNLVGVAQTGSGKTLAYILPAIVHINNQPPIR--RGDGPIALVLAPTRELAQQIQQ 278
            L QG +++G+AQTG+GKTLA++LP ++H   Q   R  RG G   LVLAPTRELA QI+ 
Sbjct: 317  LLQGHDMIGIAQTGTGKTLAFLLPGMIHTEYQSTPRGTRG-GANVLVLAPTRELALQIEM 375

Query: 279  VASEFGNSSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYL 458
               ++     ++  CV+GG  +  Q  DLERG EI+I TPGRL D +     ++   TYL
Sbjct: 376  EVKKYSFRG-MKAVCVYGGGNRNMQISDLERGAEIIICTPGRLNDLIMANVIDVSTITYL 434

Query: 459  VLDEADRMLDMGFEPQIRKIIDQIRPDRQTLMWSATWPKEVRKLAEDYLXDYVQINIGSL 638
            VLDEADRMLDMGFEPQIRK++  IRPDRQT+M SATWP  VR+LA+ Y+ + +Q+ +GSL
Sbjct: 435  VLDEADRMLDMGFEPQIRKVMLDIRPDRQTIMTSATWPPGVRRLAQSYMKNPIQVCVGSL 494

Query: 639  QLSANHNILQIVDVCQEHEKENKLNVLLQEIGQNQDPGARPLYLLKLKEKRXTXPEISDD 818
             L+A H++ QI+ + +  +  +K N +   +          ++  +         E++  
Sbjct: 495  DLAATHSVKQIIKLME--DDMDKFNTITSFVKNMSSTDKIIIFCGRKVRADDLSSELT-- 550

Query: 819  MDGQLCACTXTNTARKG-*SXXPILKRVVSSILVATDV 929
            +DG +  C   N  +         +K  V  ILVATDV
Sbjct: 551  LDGFMTQCIHGNRDQMDREQAIADIKSGVVRILVATDV 588


>UniRef50_Q8H0U8 Cluster: DEAD-box ATP-dependent RNA helicase 42; n=2;
            Arabidopsis thaliana|Rep: DEAD-box ATP-dependent RNA
            helicase 42 - Arabidopsis thaliana (Mouse-ear cress)
          Length = 1166

 Score =  205 bits (501), Expect = 2e-51
 Identities = 104/211 (49%), Positives = 144/211 (68%), Gaps = 3/211 (1%)
 Frame = +3

Query: 105  LCQGKNLVGVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVA 284
            +  G++ +GVA+TGSGKTL ++LP + HI +QPP+  GDGPI LV+APTREL QQI    
Sbjct: 563  IMSGRDCIGVAKTGSGKTLGFVLPMLRHIKDQPPVEAGDGPIGLVMAPTRELVQQIHSDI 622

Query: 285  SEFGNSSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFL--EKG-TTNLQRCTY 455
             +F     +R   V+GG+   +Q  +L+RG EIV+ TPGR+ID L    G  TNL+R T+
Sbjct: 623  RKFSKPLGIRCVPVYGGSGVAQQISELKRGTEIVVCTPGRMIDILCTSSGKITNLRRVTF 682

Query: 456  LVLDEADRMLDMGFEPQIRKIIDQIRPDRQTLMWSATWPKEVRKLAEDYLXDYVQINIGS 635
            LV+DEADRM DMGFEPQI +II  IRP+RQT+++SAT+P++V  LA   L   V+I +G 
Sbjct: 683  LVMDEADRMFDMGFEPQITRIIQNIRPERQTVLFSATFPRQVETLARKVLNKPVEIQVGG 742

Query: 636  LQLSANHNILQIVDVCQEHEKENKLNVLLQE 728
              +  N +I Q+V+V  E ++  +L  LL E
Sbjct: 743  RSV-VNKDITQLVEVRPESDRFLRLLELLGE 772


>UniRef50_UPI00015609AE Cluster: PREDICTED: similar to DEAD
            (Asp-Glu-Ala-Asp) box polypeptide 53; n=2; Equus
            caballus|Rep: PREDICTED: similar to DEAD
            (Asp-Glu-Ala-Asp) box polypeptide 53 - Equus caballus
          Length = 711

 Score =  204 bits (498), Expect = 5e-51
 Identities = 103/225 (45%), Positives = 149/225 (66%), Gaps = 1/225 (0%)
 Frame = +3

Query: 111  QGKNLVGVAQTGSGKTLAYILPAIVHINNQPPIRRG-DGPIALVLAPTRELAQQIQQVAS 287
            QG +L+GVAQTG+GKTL+Y++P  +H+++QP  R   +GP  LVL PTRELA Q++   S
Sbjct: 341  QGMDLIGVAQTGTGKTLSYLIPGFIHLDSQPISREERNGPGMLVLTPTRELALQVEAECS 400

Query: 288  EFGNSSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLD 467
            ++     +++ CV+GG  ++EQ + + +GV+I+IATPGRL D       NL+  TYLVLD
Sbjct: 401  KYSYKG-LKSVCVYGGGNRKEQIQHITKGVDIIIATPGRLNDLQMNKCVNLRSITYLVLD 459

Query: 468  EADRMLDMGFEPQIRKIIDQIRPDRQTLMWSATWPKEVRKLAEDYLXDYVQINIGSLQLS 647
            EAD+MLD+GFE QI KI+  +RPDRQT+M SATWP  +R+LA  YL + + + +G+L L 
Sbjct: 460  EADKMLDLGFEGQITKILLDVRPDRQTVMTSATWPHTIRQLARSYLKEPMIVYVGTLDLV 519

Query: 648  ANHNILQIVDVCQEHEKENKLNVLLQEIGQNQDPGARPLYLLKLK 782
            A H + Q + V  E EK      L+QE  +N  P  + +  +  K
Sbjct: 520  AVHTVKQDIIVTTEEEK----RTLIQEFLRNLAPEDKAIIFVSRK 560


>UniRef50_Q4PFD9 Cluster: Pre-mRNA-processing ATP-dependent RNA
            helicase PRP5; n=1; Ustilago maydis|Rep:
            Pre-mRNA-processing ATP-dependent RNA helicase PRP5 -
            Ustilago maydis (Smut fungus)
          Length = 1156

 Score =  203 bits (496), Expect = 8e-51
 Identities = 105/232 (45%), Positives = 156/232 (67%), Gaps = 4/232 (1%)
 Frame = +3

Query: 102  SLCQGKNLVGVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQV 281
            ++  G++++GVA+TGSGKT+A++LP   HI +Q P+   +GP+ +++ PTRELA QI + 
Sbjct: 509  AIMSGRDIIGVAKTGSGKTMAFLLPMFRHIKDQRPVEPSEGPVGIIMTPTRELAVQIYRE 568

Query: 282  ASEFGNSSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGT---TNLQRCT 452
               F  +  +R  CV+GGAP  EQ  ++++  +IV+ATPGRLID L   +   TNL R T
Sbjct: 569  MRPFIKALGLRAACVYGGAPISEQIAEMKKTADIVVATPGRLIDLLTANSGRVTNLYRVT 628

Query: 453  YLVLDEADRMLDMGFEPQIRKIIDQIRPDRQTLMWSATWPKEVRKLAEDYLXDY-VQINI 629
            YLVLDEADRM DMGFEPQ+ KI++ IRPDRQT+++SAT+PK++  LA   L +  ++I +
Sbjct: 629  YLVLDEADRMFDMGFEPQVMKILNNIRPDRQTVLFSATFPKQMESLARKVLKNKPLEITV 688

Query: 630  GSLQLSANHNILQIVDVCQEHEKENKLNVLLQEIGQNQDPGARPLYLLKLKE 785
            G   + A   I QIV+V  E  K ++L  +L E+  N++  AR L  +  +E
Sbjct: 689  GGRSVVA-AEIEQIVEVRSEDTKFHRLLEILGEL-YNREKDARTLIFVDRQE 738


>UniRef50_Q6BG49 Cluster: RNA helicase, putative; n=1; Paramecium
            tetraurelia|Rep: RNA helicase, putative - Paramecium
            tetraurelia
          Length = 1157

 Score =  202 bits (493), Expect = 2e-50
 Identities = 104/211 (49%), Positives = 141/211 (66%), Gaps = 3/211 (1%)
 Frame = +3

Query: 105  LCQGKNLVGVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVA 284
            +  G++ +G+A+TGSGKTLAY+LP + H+ +QP ++ GDGPIA+++APTRELA QI    
Sbjct: 538  IMSGRDFIGIAETGSGKTLAYLLPLLRHVLDQPALKDGDGPIAIIMAPTRELAHQIYVNC 597

Query: 285  SEFGNSSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGT---TNLQRCTY 455
              F +   +   C  GGA    Q  DL+RG EIV+ TPGR+ID L       TNL+R TY
Sbjct: 598  RWFTSILNLNVVCCVGGAGIAGQLSDLKRGTEIVVCTPGRMIDVLTTSNGKITNLRRVTY 657

Query: 456  LVLDEADRMLDMGFEPQIRKIIDQIRPDRQTLMWSATWPKEVRKLAEDYLXDYVQINIGS 635
            +V+DEADRM D+GFEPQI KII  IRPDRQ +M+SAT+PK V +LA+  L   ++  +G 
Sbjct: 658  VVIDEADRMFDLGFEPQICKIIQNIRPDRQLVMFSATFPKNVEQLAKRVLRKPIECIVGG 717

Query: 636  LQLSANHNILQIVDVCQEHEKENKLNVLLQE 728
             +  A  NI QI++   E +K  KL +L QE
Sbjct: 718  -RGQAGGNIEQIIEFMDESDKLYKLLLLFQE 747


>UniRef50_Q9NXZ2 Cluster: Probable ATP-dependent RNA helicase DDX43;
           n=24; Coelomata|Rep: Probable ATP-dependent RNA helicase
           DDX43 - Homo sapiens (Human)
          Length = 648

 Score =  201 bits (490), Expect = 4e-50
 Identities = 99/208 (47%), Positives = 141/208 (67%), Gaps = 1/208 (0%)
 Frame = +3

Query: 111 QGKNLVGVAQTGSGKTLAYILPAIVHINNQPPIR-RGDGPIALVLAPTRELAQQIQQVAS 287
           QG +L+GVAQTG+GKTL Y++P  +H+  QP ++ + + P  LVL PTRELA Q++    
Sbjct: 278 QGIDLIGVAQTGTGKTLCYLMPGFIHLVLQPSLKGQRNRPGMLVLTPTRELALQVEGECC 337

Query: 288 EFGNSSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLD 467
           ++     +R+ CV+GG  + EQ  +L++GV+I+IATPGRL D       NL+  TYLVLD
Sbjct: 338 KYSYKG-LRSVCVYGGGNRDEQIEELKKGVDIIIATPGRLNDLQMSNFVNLKNITYLVLD 396

Query: 468 EADRMLDMGFEPQIRKIIDQIRPDRQTLMWSATWPKEVRKLAEDYLXDYVQINIGSLQLS 647
           EAD+MLDMGFEPQI KI+  +RPDRQT+M SATWP  V +LA+ YL + + + +G+L L 
Sbjct: 397 EADKMLDMGFEPQIMKILLDVRPDRQTVMTSATWPHSVHRLAQSYLKEPMIVYVGTLDLV 456

Query: 648 ANHNILQIVDVCQEHEKENKLNVLLQEI 731
           A  ++ Q + V  E EK + +   LQ +
Sbjct: 457 AVSSVKQNIIVTTEEEKWSHMQTFLQSM 484


>UniRef50_Q93382 Cluster: Putative uncharacterized protein; n=2;
            Caenorhabditis|Rep: Putative uncharacterized protein -
            Caenorhabditis elegans
          Length = 811

 Score =  200 bits (489), Expect = 6e-50
 Identities = 117/279 (41%), Positives = 170/279 (60%), Gaps = 3/279 (1%)
 Frame = +3

Query: 102  SLCQGKNLVGVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQV 281
            S   G++++G+A+TGSGKT AY+ PAIVHI +QP ++ G+GP+A+++ PTRELA Q+ Q 
Sbjct: 298  SALSGRDVLGIAKTGSGKTAAYLWPAIVHIMDQPDLKAGEGPVAVIVVPTRELAIQVFQE 357

Query: 282  ASEFGNSSYVRNTCVFGGAPKREQARDLER-GVEIVIATPGRLIDFLEKGTTNLQRCTYL 458
            A +F     +   C +GG  K EQ+ +L+  G E+V+ TPGR+ID ++ G TN  R T+L
Sbjct: 358  AKKFCKVYNINPICAYGGGSKWEQSNELQNEGAEMVVCTPGRIIDLVKMGATNFLRTTFL 417

Query: 459  VLDEADRMLDMGFEPQIRKIIDQIRPDRQTLMWSATWPKEVRKLAEDYLXDYVQINIGSL 638
            V DEADRM DMGFE Q++ I D +RPDRQ LM+SAT+ ++V +LA D L D V+I  G +
Sbjct: 418  VFDEADRMFDMGFEAQVKSISDHVRPDRQCLMFSATFKQKVERLARDALVDPVRIVQGEV 477

Query: 639  QLSANHNILQIVDVCQEHEKENKLNVLLQEIGQNQDPGARPLYLLKLKEKRXTXPEIS-D 815
               AN +I Q V V Q   ++ KL+ L++ + +    G   +++ K  +      ++   
Sbjct: 478  G-EANADIEQKVFVMQ--NQDVKLHWLIRNLVEFASLGKVLIFVTKKLDSEDVAKKLKMK 534

Query: 816  DMDGQLCACTXTNTARKG*SXXPILK-RVVSSILVATDV 929
            D D  L         R       +LK R  S ILVATDV
Sbjct: 535  DFDIVLLHGDMLQAERN----ENLLKFRKKSQILVATDV 569


>UniRef50_Q012E3 Cluster: DEAD-box protein abstrakt; n=1;
           Ostreococcus tauri|Rep: DEAD-box protein abstrakt -
           Ostreococcus tauri
          Length = 1030

 Score =  200 bits (487), Expect = 1e-49
 Identities = 101/211 (47%), Positives = 141/211 (66%), Gaps = 3/211 (1%)
 Frame = +3

Query: 105 LCQGKNLVGVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVA 284
           +  G++ +G+A+TGSGKTLAYILP + HIN Q P++ GDGPI +++ PTREL  QI + A
Sbjct: 364 IMSGRDCIGIAKTGSGKTLAYILPMLRHINAQEPLKNGDGPIGMIMGPTRELVTQIGKEA 423

Query: 285 SEFGNSSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKG---TTNLQRCTY 455
             +G +       V+GG+    Q  +L+RG EIV  TPGR+ID L  G    TNL+R TY
Sbjct: 424 KRYGKALGFNAVSVYGGSGIAAQIGELKRGAEIVACTPGRMIDILTTGGGKITNLRRVTY 483

Query: 456 LVLDEADRMLDMGFEPQIRKIIDQIRPDRQTLMWSATWPKEVRKLAEDYLXDYVQINIGS 635
           +VLDEADRM DMGFEPQI +I+  +RPDRQT+M+SAT+P  +  LA   L + V+I IG 
Sbjct: 484 IVLDEADRMFDMGFEPQITRILANLRPDRQTVMFSATFPHTMEALARAALENPVEIQIGG 543

Query: 636 LQLSANHNILQIVDVCQEHEKENKLNVLLQE 728
             +  N +I Q+V++  E ++  ++  LL E
Sbjct: 544 KSV-VNSDIDQVVEIRPEEDRFLRVLELLGE 573


>UniRef50_Q54CB8 Cluster: Putative uncharacterized protein; n=1;
           Dictyostelium discoideum AX4|Rep: Putative
           uncharacterized protein - Dictyostelium discoideum AX4
          Length = 573

 Score =  200 bits (487), Expect = 1e-49
 Identities = 102/230 (44%), Positives = 147/230 (63%), Gaps = 2/230 (0%)
 Frame = +3

Query: 114 GKNLVGVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVASEF 293
           G +++G+++TGSGKTL++ILPAI HI  QP      GP  LV+APTRELA QI Q A ++
Sbjct: 176 GSDMLGISKTGSGKTLSFILPAIEHILAQPRQSYYPGPSVLVVAPTRELANQINQEAEQY 235

Query: 294 GNSSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEA 473
                +    ++GGAP+R Q   L R  +IV+ TPGR+IDF+E G  +L+  ++LV+DEA
Sbjct: 236 LRLVNIEIATIYGGAPRRSQQLQLSRRPKIVVGTPGRIIDFMESGDLSLKNISFLVVDEA 295

Query: 474 DRMLDMGFEPQIRKIIDQIRPDRQTLMWSATWPKEVRKLAEDYLXDYVQINIGSLQLSAN 653
           DR+++MGFE QI  I + IRPDRQ L WSATWPK+V   AE ++   +++ IGS QL+AN
Sbjct: 296 DRLMEMGFEQQIDGIFNSIRPDRQVLYWSATWPKKVSSFAEKHIRTPIRLQIGSSQLTAN 355

Query: 654 HNILQIVDVCQEHEKENKLNVLLQEIGQ--NQDPGARPLYLLKLKEKRXT 797
            NI Q   +       +K++ L+  +G+  + D  A+ L     K+   T
Sbjct: 356 KNISQKFKIVP--TDADKVDALMDTLGEIYSADEKAQTLIFTMTKKGADT 403


>UniRef50_A0BDD2 Cluster: Chromosome undetermined scaffold_100,
           whole genome shotgun sequence; n=1; Paramecium
           tetraurelia|Rep: Chromosome undetermined scaffold_100,
           whole genome shotgun sequence - Paramecium tetraurelia
          Length = 737

 Score =  199 bits (486), Expect = 1e-49
 Identities = 95/206 (46%), Positives = 139/206 (67%)
 Frame = +3

Query: 114 GKNLVGVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVASEF 293
           G+N++GVA+TGSGKT+AY+ P +VH++ Q  + + +GPI LV+ PTREL QQ+     ++
Sbjct: 225 GRNVIGVAKTGSGKTIAYVWPMLVHVSAQRAVEKKEGPIGLVVVPTRELGQQVYLETKKY 284

Query: 294 GNSSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEA 473
                +  + + GG  K  Q ++L  GV+I+IATPGRLI+ ++K  TNLQRCTY+VLDEA
Sbjct: 285 AQLFQISVSALLGGENKHHQWKELRAGVDIIIATPGRLIEMVKKKATNLQRCTYIVLDEA 344

Query: 474 DRMLDMGFEPQIRKIIDQIRPDRQTLMWSATWPKEVRKLAEDYLXDYVQINIGSLQLSAN 653
           D+M  +GFE QIR II QIRPD+Q L+++AT  K++R+L  D L D + I IG  +   N
Sbjct: 345 DQMFSLGFEYQIRSIIGQIRPDKQILLFTATMKKKIRQLCVDMLIDPIVITIGENENQVN 404

Query: 654 HNILQIVDVCQEHEKENKLNVLLQEI 731
            +I Q+  +    + E +L  LLQ +
Sbjct: 405 EDIKQLPVIVD--DDEGRLRWLLQNL 428


>UniRef50_Q9VXW2 Cluster: CG6227-PA; n=11; Coelomata|Rep: CG6227-PA -
            Drosophila melanogaster (Fruit fly)
          Length = 1224

 Score =  199 bits (485), Expect = 2e-49
 Identities = 101/221 (45%), Positives = 147/221 (66%), Gaps = 3/221 (1%)
 Frame = +3

Query: 102  SLCQGKNLVGVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQV 281
            ++  G++L+G+A+TGSGKTLA+ILP   HI +QP +  GDG IA+++APTREL  QI + 
Sbjct: 543  AIMSGRDLIGIAKTGSGKTLAFILPMFRHILDQPSMEDGDGAIAIIMAPTRELCMQIGKD 602

Query: 282  ASEFGNSSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGT---TNLQRCT 452
              +F  S  +R  CV+GG    EQ  +L+RG EI++ TPGR+ID L   +   TNL+R T
Sbjct: 603  IRKFSKSLGLRPVCVYGGTGISEQIAELKRGAEIIVCTPGRMIDMLAANSGRVTNLRRVT 662

Query: 453  YLVLDEADRMLDMGFEPQIRKIIDQIRPDRQTLMWSATWPKEVRKLAEDYLXDYVQINIG 632
            Y+VLDEADRM DMGFEPQ+ +IID +RPDRQT+M+SAT+P+++  LA   L   +++ +G
Sbjct: 663  YVVLDEADRMFDMGFEPQVMRIIDNVRPDRQTVMFSATFPRQMEALARRILKKPIEVIVG 722

Query: 633  SLQLSANHNILQIVDVCQEHEKENKLNVLLQEIGQNQDPGA 755
               +     + Q V +  +  K  K   LL+ +G  Q+ G+
Sbjct: 723  GRSVVCK-EVEQHVVILNDDAKFFK---LLELLGIYQEAGS 759


>UniRef50_A4S294 Cluster: Predicted protein; n=1; Ostreococcus
           lucimarinus CCE9901|Rep: Predicted protein -
           Ostreococcus lucimarinus CCE9901
          Length = 723

 Score =  198 bits (482), Expect = 4e-49
 Identities = 101/211 (47%), Positives = 140/211 (66%), Gaps = 3/211 (1%)
 Frame = +3

Query: 105 LCQGKNLVGVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVA 284
           +  G++ +GVA+TGSGKTLAYILP + HIN Q P+  GDGPI +++ PTREL  QI +  
Sbjct: 151 IMSGRDCIGVAKTGSGKTLAYILPMLRHINAQEPLASGDGPIGMIMGPTRELVTQIGKDC 210

Query: 285 SEFGNSSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGT---TNLQRCTY 455
             +G +       V+GG+    Q  DL+RG EIV  TPGR+ID L  G+   TNL+R TY
Sbjct: 211 KRYGKAMGFSAVSVYGGSGIAAQIGDLKRGAEIVACTPGRMIDLLTTGSGKITNLRRVTY 270

Query: 456 LVLDEADRMLDMGFEPQIRKIIDQIRPDRQTLMWSATWPKEVRKLAEDYLXDYVQINIGS 635
           +VLDEADRM DMGFEPQI +I+  +RPDRQT+M+SAT+P  +  LA   L + ++I IG 
Sbjct: 271 MVLDEADRMFDMGFEPQITRILANLRPDRQTVMFSATFPHTMEALARAALDNPIEIQIGG 330

Query: 636 LQLSANHNILQIVDVCQEHEKENKLNVLLQE 728
             +  N +I Q+V++  E ++  ++  LL E
Sbjct: 331 KSV-VNSDIEQLVELRPEEDRFLRVLELLGE 360


>UniRef50_Q54T87 Cluster: Putative uncharacterized protein; n=1;
           Dictyostelium discoideum AX4|Rep: Putative
           uncharacterized protein - Dictyostelium discoideum AX4
          Length = 586

 Score =  194 bits (473), Expect = 5e-48
 Identities = 102/191 (53%), Positives = 134/191 (70%), Gaps = 2/191 (1%)
 Frame = +3

Query: 114 GKNLVGVAQTGSGKTLAYILPAIVHINNQPPIRR-GDGPIALVLAPTRELAQQIQQVASE 290
           G +LVG+A TGSGKTLA++LPA++ I + P     G  P+ LV+APTRELAQQI++V   
Sbjct: 147 GNDLVGLAATGSGKTLAFLLPALLKIISLPKRPSYGATPLVLVMAPTRELAQQIEEVCKT 206

Query: 291 FGNSSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDE 470
               + +R  C +GG  K +Q+R L  GV+IVI TPGRL D L K   +L    YLVLDE
Sbjct: 207 SIRGTSIRQLCAYGGLGKIDQSRILRNGVDIVIGTPGRLNDLLRKH--HLSSVQYLVLDE 264

Query: 471 ADRMLDMGFEPQIRKIIDQIRPDRQTLMWSATWPKEVRKLAEDYLXDYVQINIGSLQLSA 650
           ADRMLDMGF PQI  +IDQI  +RQTLM+SATWPKEV+ LA  +L D ++I +GS +L+ 
Sbjct: 265 ADRMLDMGFMPQIESLIDQIPKERQTLMFSATWPKEVKLLASKFLKDPIKITVGSQELTG 324

Query: 651 NHNILQ-IVDV 680
           + N+ Q IV++
Sbjct: 325 SINVTQHIVNI 335


>UniRef50_Q4UBP8 Cluster: RNA helicase, putative; n=4; Eukaryota|Rep:
            RNA helicase, putative - Theileria annulata
          Length = 976

 Score =  193 bits (471), Expect = 9e-48
 Identities = 108/212 (50%), Positives = 141/212 (66%), Gaps = 3/212 (1%)
 Frame = +3

Query: 102  SLCQGKNLVGVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQV 281
            +L  G++++G+A+TGSGKTLA++LPAI H  +QP +R  DG I LV+APTREL  QI   
Sbjct: 401  ALMCGRDVIGIAETGSGKTLAFLLPAIRHALDQPSLRENDGMIVLVIAPTRELVIQISNE 460

Query: 282  ASEFGNSSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDF--LEKG-TTNLQRCT 452
            +S+F  +  ++   ++GGA   EQ   L+RG EIVI TPGRLID   L KG  TNL+R T
Sbjct: 461  SSKFSRAVGLKTLAIYGGAGIGEQLNALKRGAEIVIGTPGRLIDVLTLSKGKVTNLRRVT 520

Query: 453  YLVLDEADRMLDMGFEPQIRKIIDQIRPDRQTLMWSATWPKEVRKLAEDYLXDYVQINIG 632
            +LVLDEADRM DMGF PQI  I+  IRPDRQT ++SAT+P  +  LA+  L   +QI +G
Sbjct: 521  FLVLDEADRMFDMGFAPQISAIVGNIRPDRQTALFSATFPIMIENLAKKILAKPLQIVVG 580

Query: 633  SLQLSANHNILQIVDVCQEHEKENKLNVLLQE 728
                SA+  + Q V V  E +K  KL  LL E
Sbjct: 581  QRGKSAS-QVDQHVLVLNEEKKLLKLLKLLGE 611


>UniRef50_Q9C551 Cluster: DEAD-box ATP-dependent RNA helicase 5;
           n=4; Magnoliophyta|Rep: DEAD-box ATP-dependent RNA
           helicase 5 - Arabidopsis thaliana (Mouse-ear cress)
          Length = 537

 Score =  193 bits (470), Expect = 1e-47
 Identities = 99/234 (42%), Positives = 150/234 (64%), Gaps = 5/234 (2%)
 Frame = +3

Query: 105 LCQGKNLVGVAQTGSGKTLAYILPAIVHI-NNQPPIRRGD---GPIALVLAPTRELAQQI 272
           L  G++L+G+A+TGSGKTLA+ +PAI+H+      I  G     P  LVL+PTRELA QI
Sbjct: 148 LLDGRDLIGIAKTGSGKTLAFGIPAIMHVLKKNKKIGGGSKKVNPTCLVLSPTRELAVQI 207

Query: 273 QQVASEFGNSSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCT 452
             V  E G    +++ CV+GG+ K  Q   +  GV+IVI TPGRL D +E     L   +
Sbjct: 208 SDVLREAGEPCGLKSICVYGGSSKGPQISAIRSGVDIVIGTPGRLRDLIESNVLRLSDVS 267

Query: 453 YLVLDEADRMLDMGFEPQIRKIIDQIRPDRQTLMWSATWPKEVRKLAEDYL-XDYVQINI 629
           ++VLDEADRMLDMGFE  +R I+      RQ +M+SATWP +V KLA++++  + +++ I
Sbjct: 268 FVVLDEADRMLDMGFEEPVRFILSNTNKVRQMVMFSATWPLDVHKLAQEFMDPNPIKVII 327

Query: 630 GSLQLSANHNILQIVDVCQEHEKENKLNVLLQEIGQNQDPGARPLYLLKLKEKR 791
           GS+ L+ANH+++QI++V  E  ++ +L  LL++  ++Q        L K++ +R
Sbjct: 328 GSVDLAANHDVMQIIEVLDERARDQRLIALLEKYHKSQKNRVLVFALYKVEAER 381


>UniRef50_UPI00006CDDA3 Cluster: CLN3 protein; n=1; Tetrahymena
           thermophila SB210|Rep: CLN3 protein - Tetrahymena
           thermophila SB210
          Length = 1138

 Score =  191 bits (465), Expect = 5e-47
 Identities = 91/185 (49%), Positives = 131/185 (70%)
 Frame = +3

Query: 114 GKNLVGVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVASEF 293
           G+++VGVA+TGSGKT++Y+ P ++HI +Q  + + +GPI L+LAPTREL QQ+   +  +
Sbjct: 99  GRDIVGVAKTGSGKTVSYLWPLLIHILDQRELEKNEGPIGLILAPTRELCQQVYTESKRY 158

Query: 294 GNSSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEA 473
                +    + GG  K EQ + L+ GVEI+IATPGRL++ ++K  TNL+RCTY+V+DEA
Sbjct: 159 AKIYNISVGALLGGENKHEQWKMLKAGVEILIATPGRLMEMIQKKATNLRRCTYVVIDEA 218

Query: 474 DRMLDMGFEPQIRKIIDQIRPDRQTLMWSATWPKEVRKLAEDYLXDYVQINIGSLQLSAN 653
           D+M  MGFE QIR I+ QIRPDRQTL+++AT  K+++ L  D L + V I IG  +  AN
Sbjct: 219 DKMFSMGFEKQIRSIMQQIRPDRQTLLFTATLKKKIQNLVMDVLRNPVTIKIGG-ENQAN 277

Query: 654 HNILQ 668
            +I Q
Sbjct: 278 EDIRQ 282


>UniRef50_A5E058 Cluster: Pre-mRNA-processing ATP-dependent RNA
           helicase PRP5; n=1; Lodderomyces elongisporus NRRL
           YB-4239|Rep: Pre-mRNA-processing ATP-dependent RNA
           helicase PRP5 - Lodderomyces elongisporus (Yeast)
           (Saccharomyces elongisporus)
          Length = 994

 Score =  190 bits (464), Expect = 6e-47
 Identities = 90/190 (47%), Positives = 139/190 (73%), Gaps = 3/190 (1%)
 Frame = +3

Query: 114 GKNLVGVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVASEF 293
           G++++GVA+TGSGKTL+Y+LP + HI +Q   + G+GPI LVL+PTRELA QI++   +F
Sbjct: 425 GRDMIGVAKTGSGKTLSYVLPMVRHIQDQLFPKPGEGPIGLVLSPTRELALQIEKEILKF 484

Query: 294 GNSSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKG---TTNLQRCTYLVL 464
            ++  ++  C +GG+    Q  +L+RGV +++ATPGRLID L       T L+R T++VL
Sbjct: 485 SSTMDLKVCCCYGGSNIENQISELKRGVNVIVATPGRLIDLLAANGGRITTLRRTTFVVL 544

Query: 465 DEADRMLDMGFEPQIRKIIDQIRPDRQTLMWSATWPKEVRKLAEDYLXDYVQINIGSLQL 644
           DEADRM DMGFEPQI+KI  QIRPD+QT+++SAT+P+++ +LA+  L + ++I +G + +
Sbjct: 545 DEADRMFDMGFEPQIQKIFTQIRPDKQTVLFSATFPRKLEQLAKKVLHNPIEIIVGGVSV 604

Query: 645 SANHNILQIV 674
            A+    +I+
Sbjct: 605 VASEISQEII 614


>UniRef50_A4S107 Cluster: Predicted protein; n=1; Ostreococcus
           lucimarinus CCE9901|Rep: Predicted protein -
           Ostreococcus lucimarinus CCE9901
          Length = 478

 Score =  190 bits (463), Expect = 8e-47
 Identities = 105/217 (48%), Positives = 143/217 (65%), Gaps = 4/217 (1%)
 Frame = +3

Query: 114 GKNLVGVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVASEF 293
           G + + +A+TGSGKTLA++LPA   I+ Q P+ + +GPIALVLAPTRELA QI   A +F
Sbjct: 92  GHDALVMAKTGSGKTLAFLLPAYAQISRQRPLTKREGPIALVLAPTRELASQIANEAHKF 151

Query: 294 GNS--SYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFL-EKGTTNLQRCTYLVL 464
                S  R   +FGG  KR+Q + L  G EIV+ATPGRL+D L  K +TNL+R TYL L
Sbjct: 152 TKFGVSGARCCAIFGGVSKRDQFKKLRAGAEIVVATPGRLVDVLCMKNSTNLRRVTYLAL 211

Query: 465 DEADRMLDMGFEPQIRKIIDQIRPDRQTLMWSATWPKEVRKLAEDYL-XDYVQINIGSLQ 641
           DEADRMLDMGFE  +R I   +RPDRQ +M+SAT P  +++LA D L  D V ++IG++ 
Sbjct: 212 DEADRMLDMGFEKIVRSICQAVRPDRQCVMFSATMPAAMQRLARDVLARDAVTVSIGNVG 271

Query: 642 LSANHNILQIVDVCQEHEKENKLNVLLQEIGQNQDPG 752
             AN ++ Q+V V ++  +  +   L + +G   D G
Sbjct: 272 -GANEDVRQVVYVFEDDAR--RAAWLFENLGDAVDEG 305


>UniRef50_Q869K2 Cluster: Similar to Dictyostelium discoideum (Slime
            mold). Putative RNA helicase; n=3; Dictyostelium
            discoideum|Rep: Similar to Dictyostelium discoideum
            (Slime mold). Putative RNA helicase - Dictyostelium
            discoideum (Slime mold)
          Length = 1151

 Score =  190 bits (462), Expect = 1e-46
 Identities = 99/210 (47%), Positives = 138/210 (65%), Gaps = 3/210 (1%)
 Frame = +3

Query: 102  SLCQGKNLVGVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQV 281
            ++  G++L+G+A+TGSGKTLA++LP   HI  QP    G+G IAL+++PTRELA QI   
Sbjct: 542  AIMNGRDLIGIARTGSGKTLAFLLPMFRHILAQPKSAPGEGMIALIMSPTRELALQIHVE 601

Query: 282  ASEFGNSSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFL---EKGTTNLQRCT 452
              +F     +R  CV+GGA   EQ  +L+RG +IV+ TPGR+ID L    +  TNL+R T
Sbjct: 602  CKKFSKVLGLRTACVYGGASISEQIAELKRGADIVVCTPGRMIDILCANNRRITNLRRVT 661

Query: 453  YLVLDEADRMLDMGFEPQIRKIIDQIRPDRQTLMWSATWPKEVRKLAEDYLXDYVQINIG 632
            +LVLDEADRM DMGF PQI  I+D IRPDRQT+M+SAT+P +V  +A+  L   ++I  G
Sbjct: 662  FLVLDEADRMFDMGFGPQINCIVDSIRPDRQTIMFSATFPPKVENVAKKILNKPLEIIAG 721

Query: 633  SLQLSANHNILQIVDVCQEHEKENKLNVLL 722
               +  + +I Q V+V     +  +L  LL
Sbjct: 722  GRSI-VSSDIEQFVEVRPTETRFRRLIELL 750


>UniRef50_Q9M2F9 Cluster: DEAD-box ATP-dependent RNA helicase 52;
           n=22; Eukaryota|Rep: DEAD-box ATP-dependent RNA helicase
           52 - Arabidopsis thaliana (Mouse-ear cress)
          Length = 646

 Score =  190 bits (462), Expect = 1e-46
 Identities = 107/253 (42%), Positives = 159/253 (62%), Gaps = 9/253 (3%)
 Frame = +3

Query: 105 LCQGKNLVGVAQTGSGKTLAYILPAIVHINNQPPIRRGDG-----PIALVLAPTRELAQQ 269
           L  G++L+  AQTGSGKT A+  P I  I     I R  G     P+A++L+PTRELA Q
Sbjct: 180 LAAGRDLMACAQTGSGKTAAFCFPIISGIMKDQHIERPRGVRGVYPLAVILSPTRELACQ 239

Query: 270 IQQVASEFGNSSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRC 449
           I   A +F   + V+    +GG P  +Q R+LERGV+I++ATPGRL D LE+G  +LQ  
Sbjct: 240 IHDEARKFSYQTGVKVVVAYGGTPVNQQIRELERGVDILVATPGRLNDLLERGRVSLQMV 299

Query: 450 TYLVLDEADRMLDMGFEPQIRKIIDQI-RPD---RQTLMWSATWPKEVRKLAEDYLXDYV 617
            +L LDEADRMLDMGFEPQIRKI+ Q+  P    RQT+++SAT+P+E+++LA D+L +Y+
Sbjct: 300 RFLALDEADRMLDMGFEPQIRKIVQQMDMPPPGVRQTMLFSATFPREIQRLASDFLSNYI 359

Query: 618 QINIGSLQLSANHNILQIVDVCQEHEKENKLNVLLQEIGQNQDPGARPLYLLKLKEKRXT 797
            + +G +  S+   I+Q V+   + +K + L  LL    +N + G + L L+ ++ K+  
Sbjct: 360 FLAVGRVG-SSTDLIVQRVEFVHDSDKRSHLMDLLHAQRENGNQGKQALTLVFVETKKG- 417

Query: 798 XPEISDDMDGQLC 836
               +D ++  LC
Sbjct: 418 ----ADSLENWLC 426



 Score = 34.7 bits (76), Expect = 6.3
 Identities = 16/48 (33%), Positives = 25/48 (52%)
 Frame = +2

Query: 758 TIIFVETKRKAXXXXXXXXXYGWPAVCMHXDKHSKKGMKXFXNFKEGR 901
           T++FVETK+ A          G+PA  +H D+  ++      +FK GR
Sbjct: 408 TLVFVETKKGADSLENWLCINGFPATTIHGDRSQQEREVALRSFKTGR 455


>UniRef50_Q4JF01 Cluster: Vasa homlogue; n=2; Eukaryota|Rep: Vasa
           homlogue - Platynereis dumerilii (Dumeril's clam worm)
          Length = 712

 Score =  189 bits (460), Expect = 2e-46
 Identities = 99/220 (45%), Positives = 142/220 (64%), Gaps = 10/220 (4%)
 Frame = +3

Query: 114 GKNLVGVAQTGSGKTLAYILPAIVHINNQPPIRRGDG------PIALVLAPTRELAQQIQ 275
           GK+L+G AQTGSGKT A++LP +  I     I  G G      P A+++ PTREL  QI 
Sbjct: 307 GKDLMGCAQTGSGKTAAFLLPVLTGIIKNDLIEGGSGFGGPQYPAAIIVGPTRELVNQIY 366

Query: 276 QVASEFGNSSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTY 455
             A +F +S+ VR   V+GG     QAR+LE+G  +V+ TPGRL+DF+ KG  NL +  Y
Sbjct: 367 LEARKFASSTCVRPVVVYGGTSVGYQARELEKGAHVVVGTPGRLLDFIGKGKINLSKVKY 426

Query: 456 LVLDEADRMLDMGFEPQIRKIIDQI----RPDRQTLMWSATWPKEVRKLAEDYLXDYVQI 623
           L+LDEADRMLDMGFEP+IRK++       +  RQTLM+SAT+  E+++LA+++L +YV +
Sbjct: 427 LILDEADRMLDMGFEPEIRKLVTTFDMPEKGQRQTLMFSATFAAEIQQLAKEFLSEYVFV 486

Query: 624 NIGSLQLSANHNILQIVDVCQEHEKENKLNVLLQEIGQNQ 743
            +G +   AN +I Q V    ++EK  KL  +L + G ++
Sbjct: 487 TVGRVG-GANSDITQEVHQVTKYEKREKLVEILNQAGTDR 525



 Score = 34.3 bits (75), Expect = 8.3
 Identities = 15/49 (30%), Positives = 26/49 (53%)
 Frame = +2

Query: 755 KTIIFVETKRKAXXXXXXXXXYGWPAVCMHXDKHSKKGMKXFXNFKEGR 901
           +T++F+ETKR A           +PA  +H D+  ++  +   +FK GR
Sbjct: 525 RTLVFLETKRSADFLAAYLSQEQYPATSIHGDRLQREREEALLDFKTGR 573


>UniRef50_A7AWZ5 Cluster: DEAD/DEAH box helicase and helicase
            conserved C-terminal domain containing protein; n=1;
            Babesia bovis|Rep: DEAD/DEAH box helicase and helicase
            conserved C-terminal domain containing protein - Babesia
            bovis
          Length = 994

 Score =  186 bits (453), Expect = 1e-45
 Identities = 102/212 (48%), Positives = 139/212 (65%), Gaps = 3/212 (1%)
 Frame = +3

Query: 102  SLCQGKNLVGVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQV 281
            +L  G++++ +A+TGSGKT+AY+LPAI H+  QP +R  +G I L++APTRELA QI   
Sbjct: 421  ALMCGRDVLAIAETGSGKTMAYLLPAIRHVLYQPKLRENEGMIVLIIAPTRELASQIGVE 480

Query: 282  ASEFGNSSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFL--EKG-TTNLQRCT 452
            +S+      +R   V+GG+P  EQ   L+RGVEIV  TPGRLI+ L    G  TNL+R T
Sbjct: 481  SSKLCKLVGIRTKAVYGGSPIGEQLNALKRGVEIVCGTPGRLIEVLTISNGKVTNLRRVT 540

Query: 453  YLVLDEADRMLDMGFEPQIRKIIDQIRPDRQTLMWSATWPKEVRKLAEDYLXDYVQINIG 632
            ++V+DEADRM D+GF PQI  I+D IRPDRQT ++SAT+P  +  LA+  L   +QI +G
Sbjct: 541  FVVIDEADRMFDLGFSPQISAIVDNIRPDRQTALFSATFPPTIEALAKKILTKPLQIIVG 600

Query: 633  SLQLSANHNILQIVDVCQEHEKENKLNVLLQE 728
                SA+  + Q V V  E +K   L  LL E
Sbjct: 601  ESGKSAS-QVDQHVMVLPERQKMYALLKLLGE 631


>UniRef50_O00571 Cluster: ATP-dependent RNA helicase DDX3X; n=74;
            Metazoa|Rep: ATP-dependent RNA helicase DDX3X - Homo
            sapiens (Human)
          Length = 662

 Score =  185 bits (451), Expect = 2e-45
 Identities = 128/311 (41%), Positives = 176/311 (56%), Gaps = 20/311 (6%)
 Frame = +3

Query: 117  KNLVGVAQTGSGKTLAYILPAIVHINNQPP-------------IRRGDGPIALVLAPTRE 257
            ++L+  AQTGSGKT A++LP +  I +  P              RR   PI+LVLAPTRE
Sbjct: 218  RDLMACAQTGSGKTAAFLLPILSQIYSDGPGEALRAMKENGRYGRRKQYPISLVLAPTRE 277

Query: 258  LAQQIQQVASEFGNSSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTN 437
            LA QI + A +F   S VR   V+GGA   +Q RDLERG  +++ATPGRL+D +E+G   
Sbjct: 278  LAVQIYEEARKFSYRSRVRPCVVYGGADIGQQIRDLERGCHLLVATPGRLVDMMERGKIG 337

Query: 438  LQRCTYLVLDEADRMLDMGFEPQIRKIIDQ--IRPD--RQTLMWSATWPKEVRKLAEDYL 605
            L  C YLVLDEADRMLDMGFEPQIR+I++Q  + P   R T+M+SAT+PKE++ LA D+L
Sbjct: 338  LDFCKYLVLDEADRMLDMGFEPQIRRIVEQDTMPPKGVRHTMMFSATFPKEIQMLARDFL 397

Query: 606  XDYVQINIGSLQLSANHNILQIVDVCQEHEKENKLNVLLQEIGQNQDPGARPLYLLKLKE 785
             +Y+ + +G +  S + NI Q V   +E +K + L  LL   G++       L L+ ++ 
Sbjct: 398  DEYIFLAVGRVG-STSENITQKVVWVEESDKRSFLLDLLNATGKDS------LTLVFVET 450

Query: 786  KRXTXPEISDDMDGQLCACTXTNTARKG*SXXPILKRV---VSSILVATDVGCXRS*CGM 956
            K+     + D +  +  ACT  +  R        L +     S ILVAT V   R     
Sbjct: 451  KKGA-DSLEDFLYHEGYACTSIHGDRSQRDREEALHQFRSGKSPILVATAVAA-RGLDIS 508

Query: 957  GSNFXINFDXP 989
                 INFD P
Sbjct: 509  NVKHVINFDLP 519


>UniRef50_UPI00004994C0 Cluster: DEAD/DEAH box helicase; n=2;
           Entamoeba histolytica HM-1:IMSS|Rep: DEAD/DEAH box
           helicase - Entamoeba histolytica HM-1:IMSS
          Length = 722

 Score =  184 bits (449), Expect = 4e-45
 Identities = 95/212 (44%), Positives = 140/212 (66%), Gaps = 4/212 (1%)
 Frame = +3

Query: 105 LCQGKNLVGVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVA 284
           +  G + +  A+TGSGKTLAY +P I H+  Q P+ +G+GPI +V AP RELA+QI    
Sbjct: 174 IMSGYDAIVCAKTGSGKTLAYTIPLIKHVMAQRPLSKGEGPIGIVFAPIRELAEQINTEI 233

Query: 285 SEFGNSSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGT---TNLQRCTY 455
           ++FG    +R+  VFGG     Q   L+RG EIV+ TPGR+ID L       TNL+R T+
Sbjct: 234 NKFGKYLNIRSVAVFGGTGISNQIGALKRGTEIVVCTPGRMIDILVTNNGRITNLRRVTF 293

Query: 456 LVLDEADRMLDMGFEPQIRKIIDQIRPDRQTLMWSATWPKEVRKLAEDYLXDYVQINIGS 635
           +VLDEADRM DMGF PQI++II+ IRPD+Q +M+SAT+P  V + A ++L   ++I  G 
Sbjct: 294 VVLDEADRMFDMGFGPQIKRIIEGIRPDKQIVMFSATFPISVEQHAREFLKKPIEIICGG 353

Query: 636 LQLSANHNILQIVDVCQEHEK-ENKLNVLLQE 728
            +   ++ I QIV+V +  +K E  ++++L++
Sbjct: 354 -RSQVSNTIEQIVEVIETKKKIERLISIVLEQ 384


>UniRef50_UPI000065DC0B Cluster: Probable ATP-dependent RNA helicase
           DDX43 (EC 3.6.1.-) (DEAD box protein 43) (DEAD box
           protein HAGE) (Helical antigen).; n=1; Takifugu
           rubripes|Rep: Probable ATP-dependent RNA helicase DDX43
           (EC 3.6.1.-) (DEAD box protein 43) (DEAD box protein
           HAGE) (Helical antigen). - Takifugu rubripes
          Length = 510

 Score =  184 bits (449), Expect = 4e-45
 Identities = 112/267 (41%), Positives = 154/267 (57%), Gaps = 28/267 (10%)
 Frame = +3

Query: 105 LCQGKNLVGVAQTGSGKTLAYILPAIVHINNQP-PIRRGDGPIALVLAPTRELAQQIQQV 281
           L  G +L+ +AQTG+GKTLAY+LP  +H+N QP P    +GP  LVL PTRELA Q+   
Sbjct: 109 LLSGDDLIAIAQTGTGKTLAYLLPGFIHMNGQPVPKCERNGPGMLVLTPTRELALQVDAE 168

Query: 282 ASEFGNSSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYL- 458
             ++    Y ++ CV+GG  ++ Q   +ERGV+IVIATPGRL D       NL+  TYL 
Sbjct: 169 CKKYSYKDY-KSVCVYGGGDRKAQIHKVERGVDIVIATPGRLHDLQMNKLINLRSITYLV 227

Query: 459 -------------------------VLDEADRMLDMGFEPQIRKIIDQIRPDRQTLMWSA 563
                                    VLDEADRMLD+GFEPQI KI+  +RPDRQT+M SA
Sbjct: 228 SCLHVFVFKMWDSRLRSVRLFLCNKVLDEADRMLDLGFEPQIMKILLDVRPDRQTVMTSA 287

Query: 564 TWPKEVRKLAEDYLXDYVQINIGSLQLSANHNILQ-IVDVCQEHEKENKLNVLLQEIGQN 740
           TWP  VR++A  YL D + + +GSL L+A  ++ Q I+ V  E +K   LN L     +N
Sbjct: 288 TWPASVRRMATSYLKDPMMVYVGSLDLTAVSSVQQKILIVSAEEKKPYLLNFL-----KN 342

Query: 741 QDPGARPLYLLKLKEKRXTXPEISDDM 821
            +P  + L  +    ++ T  ++S D+
Sbjct: 343 MEPQDKVLIFV---GRKLTADDLSSDL 366


>UniRef50_A5KB15 Cluster: ATP-dependent RNA helicase, putative; n=1;
            Plasmodium vivax|Rep: ATP-dependent RNA helicase,
            putative - Plasmodium vivax
          Length = 1341

 Score =  184 bits (447), Expect = 7e-45
 Identities = 93/212 (43%), Positives = 141/212 (66%), Gaps = 3/212 (1%)
 Frame = +3

Query: 102  SLCQGKNLVGVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQV 281
            +L  G++++ +A+TGSGKTL+Y+ P I H+ +QPP+R  DGPIA++L PTREL++Q++  
Sbjct: 702  ALMCGRDVIAIAETGSGKTLSYLFPLIRHVLHQPPLRNNDGPIAIILTPTRELSKQVKSE 761

Query: 282  ASEFGNSSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKG---TTNLQRCT 452
            A  +  +  +R   V+GG+    Q   L+RGVEI++ TPGR+ID L       TNL R +
Sbjct: 762  ARPYCQAVNLRILAVYGGSNIGTQLNTLKRGVEILVGTPGRIIDILTISNCKVTNLNRVS 821

Query: 453  YLVLDEADRMLDMGFEPQIRKIIDQIRPDRQTLMWSATWPKEVRKLAEDYLXDYVQINIG 632
            ++VLDEADR+LD+GFE QI  I++  R D+QT M SAT+P  ++ LA+  L   ++I +G
Sbjct: 822  FVVLDEADRLLDLGFESQIHNILNNCRKDKQTAMISATFPNYIQNLAKKLLYKPIEIIVG 881

Query: 633  SLQLSANHNILQIVDVCQEHEKENKLNVLLQE 728
              +   N+NI Q V+V +  +K  +L  LL E
Sbjct: 882  E-KGKTNNNIYQFVEVLEGGKKIYRLLKLLGE 912


>UniRef50_P20447 Cluster: ATP-dependent RNA helicase DBP3; n=20;
           Ascomycota|Rep: ATP-dependent RNA helicase DBP3 -
           Saccharomyces cerevisiae (Baker's yeast)
          Length = 523

 Score =  183 bits (446), Expect = 9e-45
 Identities = 100/210 (47%), Positives = 141/210 (67%), Gaps = 2/210 (0%)
 Frame = +3

Query: 105 LCQGKNLVGVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVA 284
           L  GK++VGVA+TGSGKT A+ +PAI H+ N    R   G   LV++PTRELA QI    
Sbjct: 146 LLSGKDVVGVAETGSGKTFAFGVPAISHLMNDQKKR---GIQVLVISPTRELASQIYDNL 202

Query: 285 SEFGNSSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVL 464
               +   ++  CV+GG PK EQ   L++  ++V+ATPGRL+D L++G+ +L +  YLVL
Sbjct: 203 IVLTDKVGMQCCCVYGGVPKDEQRIQLKKS-QVVVATPGRLLDLLQEGSVDLSQVNYLVL 261

Query: 465 DEADRMLDMGFEPQIRKIIDQI-RPDRQTLMWSATWPKEVRKLAEDYLXDYVQINIGSL- 638
           DEADRML+ GFE  I+ II +     RQTLM++ATWPKEVR+LA  ++ + ++++IG+  
Sbjct: 262 DEADRMLEKGFEEDIKNIIRETDASKRQTLMFTATWPKEVRELASTFMNNPIKVSIGNTD 321

Query: 639 QLSANHNILQIVDVCQEHEKENKLNVLLQE 728
           QL+AN  I QIV+V     KE KL  LL++
Sbjct: 322 QLTANKRITQIVEVVDPRGKERKLLELLKK 351


>UniRef50_UPI00006CF9CE Cluster: DEAD/DEAH box helicase family
            protein; n=1; Tetrahymena thermophila SB210|Rep:
            DEAD/DEAH box helicase family protein - Tetrahymena
            thermophila SB210
          Length = 1357

 Score =  183 bits (445), Expect = 1e-44
 Identities = 99/208 (47%), Positives = 136/208 (65%), Gaps = 4/208 (1%)
 Frame = +3

Query: 111  QGKNLVGVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVASE 290
            Q K+   +A+TGSGKTLAY+LP I H++ Q P++ GDGPI L+L PTRELA QI   A  
Sbjct: 743  QAKSKDSIAETGSGKTLAYLLPMIRHVSAQRPLQEGDGPIGLILVPTRELATQIYLEAKP 802

Query: 291  FGNSSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGT---TNLQRCTYLV 461
            F  +       VFGG   + Q  +L+RG EIV+ATPGRLID L       TNL+R T +V
Sbjct: 803  FLKAYKYEIVAVFGGTGIKGQLSELKRGCEIVVATPGRLIDVLTTSNGKITNLKRITMVV 862

Query: 462  LDEADRMLDMGFEPQIRKIIDQIRPDRQTLMWSATWPKEVRKLAEDYLXDY-VQINIGSL 638
            +DEADRM D+GFEPQI KI+   RPD+QT+++SAT+PK V  LA+  +    V++ +G+ 
Sbjct: 863  IDEADRMFDLGFEPQIAKILATTRPDKQTVLFSATFPKNVENLAKKLMRHKPVEVVVGA- 921

Query: 639  QLSANHNILQIVDVCQEHEKENKLNVLL 722
            +  A  NI Q++++  E  +  +L  LL
Sbjct: 922  RGQACTNITQLIEIRDESTRLFRLLELL 949


>UniRef50_Q0UN57 Cluster: Pre-mRNA-processing ATP-dependent RNA
            helicase PRP5; n=1; Phaeosphaeria nodorum|Rep:
            Pre-mRNA-processing ATP-dependent RNA helicase PRP5 -
            Phaeosphaeria nodorum (Septoria nodorum)
          Length = 1149

 Score =  182 bits (443), Expect = 2e-44
 Identities = 102/230 (44%), Positives = 143/230 (62%), Gaps = 6/230 (2%)
 Frame = +3

Query: 114  GKNLVGVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVASEF 293
            G++L+GVA+TGSGKTLA+ +P I H+ +Q P++  DGPI L+LAPTREL+ QI      F
Sbjct: 546  GRDLIGVAKTGSGKTLAFGIPMIRHVLDQRPLKPADGPIGLILAPTRELSLQIVNELKPF 605

Query: 294  GNSSYVRNTCVFGGAPKREQARDLER-GVEIVIATPGRLIDFLEKGT---TNLQRCTYLV 461
             N+S +   C +GG P  +Q   ++R G+ I+ AT GRLID L+  +    + +R TY+V
Sbjct: 606  LNASGITIKCAYGGQPISDQIAMIKRGGIHILCATAGRLIDLLQSNSGRVLSFRRITYVV 665

Query: 462  LDEADRMLDMGFEPQIRKIIDQIRPDRQTLMWSATWPKEVRKLAEDYLXDYVQINIGSLQ 641
            LDEADRM DMGFEPQ+ KI+  IRPDRQT+++SAT+PK +  LA   L    ++ IG   
Sbjct: 666  LDEADRMFDMGFEPQVMKILASIRPDRQTILFSATFPKTMAALARKALDKPAEVIIGGRS 725

Query: 642  LSANHNILQIVDVCQEHEKENKLNVLLQEIGQ--NQDPGARPLYLLKLKE 785
              A      I  V   +EK  K+  LL  +GQ  + D  A+ L   + +E
Sbjct: 726  KVAPEITQHITIVPPSYEK--KIAKLLHHLGQTFSDDENAQVLIFTERQE 773


>UniRef50_Q5KME7 Cluster: Pre-mRNA-processing ATP-dependent RNA
            helicase PRP5; n=1; Filobasidiella neoformans|Rep:
            Pre-mRNA-processing ATP-dependent RNA helicase PRP5 -
            Cryptococcus neoformans (Filobasidiella neoformans)
          Length = 1072

 Score =  182 bits (442), Expect = 3e-44
 Identities = 90/215 (41%), Positives = 139/215 (64%), Gaps = 3/215 (1%)
 Frame = +3

Query: 102  SLCQGKNLVGVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQV 281
            ++  G++++G+A+TGSGKT+A++LP + H+ +Q P+   +GPIA+V++PTRELA QI + 
Sbjct: 436  AIMSGRDVIGIAKTGSGKTVAFLLPMLRHVRDQRPVSGSEGPIAVVMSPTRELASQIYKE 495

Query: 282  ASEFGNSSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKG---TTNLQRCT 452
               F     +R +C  GG+   E    +++G E+VI TPGR+ID L       TN++R T
Sbjct: 496  CQPFLKVLNIRASCCVGGSSISEDIAAMKKGAEVVICTPGRMIDLLTANNGRVTNVRRTT 555

Query: 453  YLVLDEADRMLDMGFEPQIRKIIDQIRPDRQTLMWSATWPKEVRKLAEDYLXDYVQINIG 632
            Y+V+DEADRM DMGFEPQ+ KII+ +RP  Q +++SAT+PK +  LA   L   ++I +G
Sbjct: 556  YIVMDEADRMFDMGFEPQVMKIINNVRPSAQKVLFSATFPKTMESLARRILVKPLEITVG 615

Query: 633  SLQLSANHNILQIVDVCQEHEKENKLNVLLQEIGQ 737
               + A   I Q V+V     K  +L  +L E+G+
Sbjct: 616  GRSVVA-PEIDQRVEVRDGDTKFTRLLEILGEMGE 649


>UniRef50_Q9XVZ6 Cluster: Putative uncharacterized protein; n=2;
           Caenorhabditis|Rep: Putative uncharacterized protein -
           Caenorhabditis elegans
          Length = 504

 Score =  180 bits (439), Expect = 7e-44
 Identities = 94/197 (47%), Positives = 128/197 (64%), Gaps = 6/197 (3%)
 Frame = +3

Query: 105 LCQGKNLVGVAQTGSGKTLAYILPAIVHINNQ-PPIRRGD-----GPIALVLAPTRELAQ 266
           L  G++ +GV+QTGSGKTLA++LPA++HI+ Q     + D      P  LVL+PTRELAQ
Sbjct: 118 LLSGQDCIGVSQTGSGKTLAFLLPALLHIDAQLAQYEKNDEEQKPSPFVLVLSPTRELAQ 177

Query: 267 QIQQVASEFGNSSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQR 446
           QI+    ++  + Y ++ C++GG  + EQ      GVEIVIATPGRL D    G  +L  
Sbjct: 178 QIEGEVKKYSYNGY-KSVCLYGGGSRPEQVEACRGGVEIVIATPGRLTDLSNDGVISLAS 236

Query: 447 CTYLVLDEADRMLDMGFEPQIRKIIDQIRPDRQTLMWSATWPKEVRKLAEDYLXDYVQIN 626
            TY+VLDEADRMLDMGFE  IR+I+ +IRPDR   + SATWP+ VRKL + Y  + V   
Sbjct: 237 VTYVVLDEADRMLDMGFEVAIRRILFEIRPDRLVALTSATWPEGVRKLTDKYTKEAVMAV 296

Query: 627 IGSLQLSANHNILQIVD 677
            GSL L++  ++ Q  +
Sbjct: 297 NGSLDLTSCKSVTQFFE 313


>UniRef50_O97032 Cluster: DjVLGB; n=2; Dugesia|Rep: DjVLGB - Dugesia
           japonica (Planarian)
          Length = 781

 Score =  180 bits (437), Expect = 1e-43
 Identities = 95/221 (42%), Positives = 144/221 (65%), Gaps = 8/221 (3%)
 Frame = +3

Query: 102 SLCQGKNLVGVAQTGSGKTLAYILPAIVHIN----NQPPIRRGDGPIALVLAPTRELAQQ 269
           ++ + ++++  AQTGSGKT A+++P I H+     NQ    +   P  L+LAPTRELA Q
Sbjct: 217 AILEHRDIMACAQTGSGKTAAFLIPIINHLVCQDLNQQRYSKTAYPKCLILAPTRELAIQ 276

Query: 270 IQQVASEFGNSSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRC 449
           I   + +F  ++ +R+  V+GGA    Q R+++ G  +++ATPGRL+DF+EK   +L+ C
Sbjct: 277 ILSESQKFSLNTPLRSCVVYGGADTHSQIREVQMGCHLLVATPGRLVDFIEKNKISLEFC 336

Query: 450 TYLVLDEADRMLDMGFEPQIRKIIDQIRP----DRQTLMWSATWPKEVRKLAEDYLXDYV 617
            Y+VLDEADRMLDMGFEPQIRKII++       +RQTLM+SAT+PKE++KLA D+L +Y+
Sbjct: 337 KYIVLDEADRMLDMGFEPQIRKIIEESNMPSGINRQTLMFSATFPKEIQKLAADFLYNYI 396

Query: 618 QINIGSLQLSANHNILQIVDVCQEHEKENKLNVLLQEIGQN 740
            + +G +  S + +I Q +    + EK N L  +      N
Sbjct: 397 FMTVGRVG-STSDSIKQEIIYMTDVEKLNYLKNIFNTTAPN 436


>UniRef50_Q9VHP0 Cluster: ATP-dependent RNA helicase bel; n=4;
            Protostomia|Rep: ATP-dependent RNA helicase bel -
            Drosophila melanogaster (Fruit fly)
          Length = 798

 Score =  178 bits (433), Expect = 3e-43
 Identities = 100/243 (41%), Positives = 150/243 (61%), Gaps = 14/243 (5%)
 Frame = +3

Query: 105  LCQGKNLVGVAQTGSGKTLAYILPAI---VHINNQPP-------IRRGDGPIALVLAPTR 254
            +  G++L+  AQTGSGKT A+++P +     + + PP        RR   P+ LVLAPTR
Sbjct: 329  IINGRDLMACAQTGSGKTAAFLVPILNQMYELGHVPPPQSTRQYSRRKQYPLGLVLAPTR 388

Query: 255  ELAQQIQQVASEFGNSSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTT 434
            ELA QI + A +F   S +R   ++GG    EQ R+L+RG  +++ATPGRL D + +G  
Sbjct: 389  ELATQIFEEAKKFAYRSRMRPAVLYGGNNTSEQMRELDRGCHLIVATPGRLEDMITRGKV 448

Query: 435  NLQRCTYLVLDEADRMLDMGFEPQIRKIIDQIR----PDRQTLMWSATWPKEVRKLAEDY 602
             L+   +LVLDEADRMLDMGFEPQIR+I++Q+       RQTLM+SAT+PK++++LA D+
Sbjct: 449  GLENIRFLVLDEADRMLDMGFEPQIRRIVEQLNMPPTGQRQTLMFSATFPKQIQELASDF 508

Query: 603  LXDYVQINIGSLQLSANHNILQIVDVCQEHEKENKLNVLLQEIGQNQDPGARPLYLLKLK 782
            L +Y+ + +G +  S + NI Q +    E +K + L  LL  I    +     L L+ ++
Sbjct: 509  LSNYIFLAVGRVG-STSENITQTILWVYEPDKRSYLLDLLSSIRDGPEYTKDSLTLIFVE 567

Query: 783  EKR 791
             K+
Sbjct: 568  TKK 570


>UniRef50_Q5KHB7 Cluster: ATP-dependent RNA helicase DBP3; n=2;
           Filobasidiella neoformans|Rep: ATP-dependent RNA
           helicase DBP3 - Cryptococcus neoformans (Filobasidiella
           neoformans)
          Length = 605

 Score =  177 bits (432), Expect = 5e-43
 Identities = 96/205 (46%), Positives = 136/205 (66%), Gaps = 12/205 (5%)
 Frame = +3

Query: 102 SLCQGKNLVGVAQTGSGKTLAYILPAIVHINNQPPI---RRGDGPIA-----LVLAPTRE 257
           +L   K++VG+A+TGSGKTLA+ +P I  ++  PP+   ++G G +      LVLAPTRE
Sbjct: 206 ALLSKKDVVGIAETGSGKTLAFGVPGINLLSQLPPVTGSKKGRGQVPGQIQMLVLAPTRE 265

Query: 258 LAQQIQQVASEFGNSSYVRNTCVFGGAPKREQARDL-ERGVEIVIATPGRLIDFLEKGTT 434
           LAQQ  +  S FG    +++ C+FGG  K  QAR+L ++   +V+ TPGR +D  + G  
Sbjct: 266 LAQQSHEHLSAFGEQVGLKSVCIFGGVGKDGQARELSQKDTRVVVGTPGRTLDLADSGEL 325

Query: 435 NLQRCTYLVLDEADRMLDMGFEPQIRKIIDQI---RPDRQTLMWSATWPKEVRKLAEDYL 605
           +L   +YLVLDEADRMLD GFE  IR+II      +  RQT+M+SATWP+ VR+LA  +L
Sbjct: 326 DLSSVSYLVLDEADRMLDAGFENDIRRIIAHTPGHKEGRQTVMFSATWPESVRRLASTFL 385

Query: 606 XDYVQINIGSLQLSANHNILQIVDV 680
            + ++I +GS +LSAN  I QIV+V
Sbjct: 386 NNPLRITVGSDELSANKRIEQIVEV 410


>UniRef50_UPI00004992E6 Cluster: DEAD/DEAH box helicase; n=3;
           Entamoeba histolytica HM-1:IMSS|Rep: DEAD/DEAH box
           helicase - Entamoeba histolytica HM-1:IMSS
          Length = 578

 Score =  177 bits (430), Expect = 8e-43
 Identities = 97/234 (41%), Positives = 143/234 (61%), Gaps = 12/234 (5%)
 Frame = +3

Query: 117 KNLVGVAQTGSGKTLAYILPAIVHINNQPPIRRGDG--------PIALVLAPTRELAQQI 272
           ++L+  AQTGSGKT A++ P I  I   PP+ R           P+AL+LAPTREL QQI
Sbjct: 169 RDLMSCAQTGSGKTAAFLFPIISDILKNPPMPRQSNFSHRVTVFPVALILAPTRELGQQI 228

Query: 273 QQVASEFGNSSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCT 452
            + A  F   + +R+ CV+GG+    Q +++ +G +I++ATPGRL+ F EK   +L    
Sbjct: 229 YEEAVRFTEDTPIRSVCVYGGSDSYTQIQEMGKGCDILVATPGRLLYFTEKKIVSLSSVR 288

Query: 453 YLVLDEADRMLDMGFEPQIRKIID--QIRP--DRQTLMWSATWPKEVRKLAEDYLXDYVQ 620
           YL+ DEADRMLDMGFEPQIR+I +  ++ P   RQTLM+SAT+PK++++LA D+L DYV 
Sbjct: 289 YLIFDEADRMLDMGFEPQIREICEDNEMPPVGKRQTLMFSATFPKQIQRLAADFLDDYVF 348

Query: 621 INIGSLQLSANHNILQIVDVCQEHEKENKLNVLLQEIGQNQDPGARPLYLLKLK 782
           I +G     A   +  I  +    E+E K   +L  +G+    G + +  ++ K
Sbjct: 349 ITVG----RAGSTVESIQQIILWVEEEIKQEAILDVLGEFAGKGQKTVIFVETK 398


>UniRef50_Q1AG34 Cluster: Ded1-like DEAD-box RNA helicase; n=1;
            Chironomus tentans|Rep: Ded1-like DEAD-box RNA helicase -
            Chironomus tentans (Midge)
          Length = 776

 Score =  177 bits (430), Expect = 8e-43
 Identities = 102/244 (41%), Positives = 152/244 (62%), Gaps = 15/244 (6%)
 Frame = +3

Query: 105  LCQGKNLVGVAQTGSGKTLAYILPAIVHI----------NNQPPIRRGDGPIALVLAPTR 254
            +  G++L+  AQTGSGKT A+++P +  +          +N+P  RR   P+ LVLAPTR
Sbjct: 301  ILSGRDLMSCAQTGSGKTAAFLVPILNRMLEQGASMNPASNRPYQRRKQYPLGLVLAPTR 360

Query: 255  ELAQQIQQVASEFGNSSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTT 434
            ELA QI + A +F   S +R   ++GG    EQ R+L+RG  +++ATPGRL D + +G  
Sbjct: 361  ELATQIYEEAKKFSYRSRMRPAVLYGGNNTSEQMRELDRGCHLIVATPGRLDDIINRGKI 420

Query: 435  NLQRCTYLVLDEADRMLDMGFEPQIRKIID--QIRP--DRQTLMWSATWPKEVRKLAEDY 602
             L+   +LVLDEADRMLDMGFEPQIR II+   + P   RQTLM+SAT+PK +++LA D+
Sbjct: 421  GLENLRFLVLDEADRMLDMGFEPQIRHIIENRDMPPTGQRQTLMFSATFPKNIQELASDF 480

Query: 603  LXDYVQINIGSLQLSANHNILQIVDVCQEHEKENKLNVLLQEIGQ-NQDPGARPLYLLKL 779
            L +Y+ + +G +  S + NI Q +    E+EK + L  LL  + + + D     L L+ +
Sbjct: 481  LSNYIFLAVGRVG-STSENITQTILWVNENEKRSYLLDLLSRLREGSPDYSPDSLTLIFV 539

Query: 780  KEKR 791
            + K+
Sbjct: 540  ETKK 543


>UniRef50_A0BDT5 Cluster: Chromosome undetermined scaffold_101,
           whole genome shotgun sequence; n=1; Paramecium
           tetraurelia|Rep: Chromosome undetermined scaffold_101,
           whole genome shotgun sequence - Paramecium tetraurelia
          Length = 1238

 Score =  177 bits (430), Expect = 8e-43
 Identities = 92/210 (43%), Positives = 138/210 (65%), Gaps = 8/210 (3%)
 Frame = +3

Query: 114 GKNLVGVAQTGSGKTLAYILPAIVHINNQPP-----IRRGDGPIALVLAPTRELAQQIQQ 278
           G +++G+AQTGSGKT+AY+LP ++ I +Q        ++ +GP  L+L PTRELA QI+ 
Sbjct: 131 GYDVIGIAQTGSGKTIAYLLPGLIQITSQKTEELNNTKKQNGPQMLILVPTRELAMQIES 190

Query: 279 VASEFGNSSYVRNTCVFGGAPKRE-QARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTY 455
               F  +  ++  C++GG   R+ Q  +L R   I++ATPGRL+DFL +G T L   +Y
Sbjct: 191 EIQLFTQNYRLKTLCIYGGINNRKNQFYNLGRFPNILVATPGRLLDFLREGATTLANVSY 250

Query: 456 LVLDEADRMLDMGFEPQIRKIIDQIRPDRQTLMWSATWPKEVRKLAEDYL-XDYVQINIG 632
           LV+DEADR+L++GFE  IR+I+ QIR DRQT+ +SATWPK V+ LA D+     + + IG
Sbjct: 251 LVIDEADRLLELGFEDTIREIVQQIRFDRQTVFFSATWPKAVKDLAFDFCQYSPIYVQIG 310

Query: 633 SLQLSANHNILQ-IVDVCQEHEKENKLNVL 719
              L+ N NI Q I+ + Q+ + +  L++L
Sbjct: 311 KSNLTINKNIDQEIICLFQKDKLQKLLDIL 340


>UniRef50_Q4Z5Q6 Cluster: ATP-dependent RNA helicase, putative; n=4;
            Plasmodium (Vinckeia)|Rep: ATP-dependent RNA helicase,
            putative - Plasmodium berghei
          Length = 1312

 Score =  176 bits (429), Expect = 1e-42
 Identities = 89/212 (41%), Positives = 139/212 (65%), Gaps = 3/212 (1%)
 Frame = +3

Query: 102  SLCQGKNLVGVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQV 281
            +L  G++++ +A+TGSGKT++Y+ P I H+ +Q  +R  DGPI ++L PTREL+ Q++  
Sbjct: 602  ALMCGRDIIAIAETGSGKTISYLFPLIRHVLHQDKLRNNDGPIGIILTPTRELSIQVKNE 661

Query: 282  ASEFGNSSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFL---EKGTTNLQRCT 452
            AS +  +  ++   V+GG+    Q   L++GVEI++ TPGR+ID L       TNL R +
Sbjct: 662  ASIYCKAVDLKILAVYGGSNIGAQLNVLKKGVEIIVGTPGRIIDILTISNSKVTNLNRAS 721

Query: 453  YLVLDEADRMLDMGFEPQIRKIIDQIRPDRQTLMWSATWPKEVRKLAEDYLXDYVQINIG 632
            ++VLDEADR+LD+GFE QI  I++  R D+QT M SAT+P  ++ LA+  L   ++I +G
Sbjct: 722  FIVLDEADRLLDLGFESQIHSILNNCRKDKQTAMISATFPNYIQNLAKKLLYKPIEIIVG 781

Query: 633  SLQLSANHNILQIVDVCQEHEKENKLNVLLQE 728
              +   N+NI Q V+V +E +K  +L  LL E
Sbjct: 782  E-KGKTNNNIYQFVEVLEEKKKLFRLLKLLGE 812


>UniRef50_A0EA02 Cluster: Chromosome undetermined scaffold_85, whole
           genome shotgun sequence; n=1; Paramecium
           tetraurelia|Rep: Chromosome undetermined scaffold_85,
           whole genome shotgun sequence - Paramecium tetraurelia
          Length = 957

 Score =  176 bits (429), Expect = 1e-42
 Identities = 85/190 (44%), Positives = 125/190 (65%), Gaps = 17/190 (8%)
 Frame = +3

Query: 114 GKNLVGVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQI-----QQ 278
           G+N + +AQTGSGKTLAY+LPA+VH+     I     P  L+L PTREL  QI     Q 
Sbjct: 96  GRNALAIAQTGSGKTLAYLLPALVHLEQHAMIMESPQPKLLILVPTRELGVQIYDQLLQL 155

Query: 279 VASEFGNSSY-----------VRNTCVFGGAP-KREQARDLERGVEIVIATPGRLIDFLE 422
           +   +GN              ++  C++GG P K++Q   +++G+ +++ATPGRLI+ ++
Sbjct: 156 IEFYYGNKKQNEKENSPNLTNLKIVCIYGGNPNKKQQVELIQKGIHVIVATPGRLIELID 215

Query: 423 KGTTNLQRCTYLVLDEADRMLDMGFEPQIRKIIDQIRPDRQTLMWSATWPKEVRKLAEDY 602
           +G  NL + T L+LDEADRMLDMGFEPQ+R I+  IR DRQT++ SATWP EV++L++++
Sbjct: 216 EGMVNLNKITMLILDEADRMLDMGFEPQVRDIVSTIREDRQTILLSATWPNEVQQLSKEF 275

Query: 603 LXDYVQINIG 632
             D + + IG
Sbjct: 276 CYDPILVKIG 285


>UniRef50_Q8I416 Cluster: ATP-dependent RNA helicase, putative; n=2;
            Plasmodium|Rep: ATP-dependent RNA helicase, putative -
            Plasmodium falciparum (isolate 3D7)
          Length = 1490

 Score =  176 bits (428), Expect = 1e-42
 Identities = 88/212 (41%), Positives = 139/212 (65%), Gaps = 3/212 (1%)
 Frame = +3

Query: 102  SLCQGKNLVGVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQV 281
            +L  G++++ +A+TGSGKTL+Y+ P I H+ +Q P+R  DGPI+++L PTREL+ Q++  
Sbjct: 756  ALMCGRDVIAIAETGSGKTLSYLFPVIRHVLHQEPLRNNDGPISIILTPTRELSIQVKNE 815

Query: 282  ASEFGNSSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKG---TTNLQRCT 452
            A  +  +  +    V+GG+    Q + L++GVEI++ TPGR+ID L       TNL R +
Sbjct: 816  AKIYCKAVNIEILAVYGGSNIARQLKVLKKGVEILVGTPGRIIDILTISNCKVTNLNRVS 875

Query: 453  YLVLDEADRMLDMGFEPQIRKIIDQIRPDRQTLMWSATWPKEVRKLAEDYLXDYVQINIG 632
            ++VLDEADR+LD+GFE QI  I+   R D+QT M SAT+P  ++ +A+  L   ++I +G
Sbjct: 876  FVVLDEADRLLDLGFESQIYNILRNCRKDKQTAMISATFPNYIQNMAKKLLYKPIEIIVG 935

Query: 633  SLQLSANHNILQIVDVCQEHEKENKLNVLLQE 728
              +   N+NI Q V++ +E +K  +L  LL E
Sbjct: 936  E-KGKTNNNIYQFVEIIEESKKVFRLLKLLGE 966


>UniRef50_A0D315 Cluster: Chromosome undetermined scaffold_36, whole
            genome shotgun sequence; n=2; Paramecium tetraurelia|Rep:
            Chromosome undetermined scaffold_36, whole genome shotgun
            sequence - Paramecium tetraurelia
          Length = 1127

 Score =  176 bits (428), Expect = 1e-42
 Identities = 112/303 (36%), Positives = 166/303 (54%), Gaps = 8/303 (2%)
 Frame = +3

Query: 105  LCQGKNLVGVAQTGSGKTLAYILPAIVHINNQ---PPIR-RGDGPIALVLAPTRELAQQI 272
            +  G +L+GVA+TGSGKT  Y+LP ++ I  Q      R R +GP  L+LAPTREL  QI
Sbjct: 134  ILSGYDLIGVAETGSGKTFGYLLPGLIQIKCQNYGSNFRNRINGPEILILAPTRELVMQI 193

Query: 273  QQVASEFGNSSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCT 452
             Q  S F   + +     +GG  + +QA+ ++R  +I++A PGRL DFL++G  +L + T
Sbjct: 194  AQQVSLFMKPNNLTVATAYGGQNRDQQAQQIKRNPDILVACPGRLKDFLQEGILDLSKVT 253

Query: 453  YLVLDEADRMLDMGFEPQIRKIIDQIRPDRQTLMWSATWPKEVRKLAEDY-LXDYVQINI 629
            YLV+DEADR+LDMGFE  +R I+ + R DRQT+ +SATWPK VR L+ D+   D + + +
Sbjct: 254  YLVIDEADRLLDMGFEDDVRFIVQRTRQDRQTVFFSATWPKAVRNLSLDFCAEDPIYVQV 313

Query: 630  GSLQLSANHNILQIVDVCQEHEKENKLNVLLQEIGQNQDPGARPLYLLKLKEKRXTXPEI 809
            G   L+ N NI Q +     ++K   L  +L ++  N         +L   E R +  ++
Sbjct: 314  GRSNLTVNKNIDQEIICLYNNQKLQTLLDILDQLKINDK-------VLIFAETRISCEQL 366

Query: 810  SDDM--DGQLCACTXTN-TARKG*SXXPILKRVVSSILVATDVGCXRS*CGMGSNFXINF 980
            S DM  +G        N T  +  S     K+  + +L ATD+   R          IN+
Sbjct: 367  SVDMTQEGYYAVALHGNKTQGQRDSIMECYKKGDTKLLCATDL-ASRGLDVSDITVVINY 425

Query: 981  DXP 989
            D P
Sbjct: 426  DFP 428


>UniRef50_A7TJK8 Cluster: Putative uncharacterized protein; n=1;
           Vanderwaltozyma polyspora DSM 70294|Rep: Putative
           uncharacterized protein - Vanderwaltozyma polyspora DSM
           70294
          Length = 872

 Score =  176 bits (428), Expect = 1e-42
 Identities = 93/213 (43%), Positives = 141/213 (66%), Gaps = 7/213 (3%)
 Frame = +3

Query: 102 SLCQGKNLVGVAQTGSGKTLAYILPAIVHINNQPPIRRGD-GPIALVLAPTRELAQQIQQ 278
           ++  G++L+G+++TGSGKT++YILP +  I  Q  + + + GP+ L+LAPTRELA QI +
Sbjct: 310 AIMSGRDLIGISKTGSGKTISYILPMLRQIKAQRTLSKNETGPLGLILAPTRELALQINE 369

Query: 279 VASEFGNSSY-VRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNL---QR 446
              +F      +R  C  GG+  ++Q  DL+RGVEIV+ATPGRLID L   +  L   +R
Sbjct: 370 EVEKFTKQDRSIRTICCTGGSEMKKQINDLKRGVEIVVATPGRLIDILTLNSGKLISTKR 429

Query: 447 CTYLVLDEADRMLDMGFEPQIRKIIDQIRPDRQTLMWSATWPKEVRKLAEDYLXDYVQIN 626
            T++V+DEADR+ DMGFEPQI +I+  +RPD+Q +++SAT+P ++R  A   L D + + 
Sbjct: 430 ITFVVMDEADRLFDMGFEPQITQIMKTVRPDKQCVLFSATFPNKLRSFAARILTDPLTVT 489

Query: 627 IGSLQLSANHNILQIVDV-CQEHEKENKL-NVL 719
           I S  L  N N+ Q   +   E++K N+L N+L
Sbjct: 490 INSNNL-VNENVNQSFYIEDNENDKFNRLVNIL 521


>UniRef50_O97031 Cluster: DjVLGA; n=1; Dugesia japonica|Rep: DjVLGA
           - Dugesia japonica (Planarian)
          Length = 726

 Score =  175 bits (427), Expect = 2e-42
 Identities = 98/220 (44%), Positives = 138/220 (62%), Gaps = 11/220 (5%)
 Frame = +3

Query: 105 LCQGKNLVGVAQTGSGKTLAYILPAIVHINNQPPIR-------RGDGPIALVLAPTRELA 263
           + Q ++L+  AQTGSGKT A+++P +  +    P         + + P+AL+LAPTRELA
Sbjct: 245 IMQRRDLMACAQTGSGKTAAFLIPLLSMMYQDGPGNSLSHSGYKKEYPVALILAPTRELA 304

Query: 264 QQIQQVASEFGNSSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQ 443
            QI   A +F   S VR   V+GG   R Q +D+ +G  +++ATPGRL D LE+    L 
Sbjct: 305 VQIYDEARKFSYRSLVRPCVVYGGRDIRGQLQDISQGCNMLVATPGRLSDMLERCKIGLD 364

Query: 444 RCTYLVLDEADRMLDMGFEPQIRKIIDQIR----PDRQTLMWSATWPKEVRKLAEDYLXD 611
              YLVLDEADRMLDMGFEPQIRKI++Q        RQTLM+SAT+P+E++ LA D+L D
Sbjct: 365 CIRYLVLDEADRMLDMGFEPQIRKIVEQTNMPPPGQRQTLMFSATFPREIQMLASDFLKD 424

Query: 612 YVQINIGSLQLSANHNILQIVDVCQEHEKENKLNVLLQEI 731
           Y+ + +G +  S + NI Q +    E+EK + L  +L +I
Sbjct: 425 YLFLRVGKVG-STSQNITQRIVYVDENEKRDHLLDILTDI 463


>UniRef50_Q00T47 Cluster: Putative RNA helicase, DRH1; n=1;
           Ostreococcus tauri|Rep: Putative RNA helicase, DRH1 -
           Ostreococcus tauri
          Length = 1118

 Score =  175 bits (426), Expect = 2e-42
 Identities = 102/234 (43%), Positives = 150/234 (64%), Gaps = 21/234 (8%)
 Frame = +3

Query: 105 LCQGKNLVGVAQTGSGKTLAYILPAIVHI-----NNQPPIRRGDG--------PIALVLA 245
           L +GK++V +A+TGSGKT  ++LPA+  I        P ++  DG        P  +VLA
Sbjct: 120 LLKGKDVVAIAKTGSGKTCGFLLPALAKIVAEGTQKAPEMQLVDGRWRPGAVTPSVIVLA 179

Query: 246 PTRELAQQIQQVASEFGNSSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEK 425
           PTRELA QI    ++F  ++  R+  ++GGA K +Q R L  G ++V+ATPGRL DFLE 
Sbjct: 180 PTRELAIQIHDECAKFCPAAGCRSAVLYGGAAKGDQLRALRSGADVVVATPGRLNDFLEP 239

Query: 426 --GTT---NLQRCTYLVLDEADRMLDMGFEPQIRKIIDQIRPDRQTLMWSATWPKEVRKL 590
             G T   +  +  Y+VLDEADRMLDMGFEPQI+KI       RQT+M++ATWPK V+K+
Sbjct: 240 PPGFTAPVSAVKAAYVVLDEADRMLDMGFEPQIKKIFKLCPSARQTVMFTATWPKGVQKI 299

Query: 591 AEDYLXD--YVQINIGSLQLSANHNILQIVDVCQEHEKENK-LNVLLQEIGQNQ 743
           A+ +     ++QI  G  +L+AN +I Q V+V +E EK ++ + +L +E+G+N+
Sbjct: 300 ADAFTTKPIHIQIGSGGDKLTANKSITQTVEVVEEEEKFDRCVAILKKELGKNE 353


>UniRef50_P21372 Cluster: Pre-mRNA-processing ATP-dependent RNA
           helicase PRP5; n=2; Saccharomyces cerevisiae|Rep:
           Pre-mRNA-processing ATP-dependent RNA helicase PRP5 -
           Saccharomyces cerevisiae (Baker's yeast)
          Length = 849

 Score =  175 bits (426), Expect = 2e-42
 Identities = 87/220 (39%), Positives = 144/220 (65%), Gaps = 5/220 (2%)
 Frame = +3

Query: 102 SLCQGKNLVGVAQTGSGKTLAYILPAIVHINNQPPIRRGD-GPIALVLAPTRELAQQIQQ 278
           ++  G++++G+++TGSGKT++Y+LP +  +  Q P+ + + GP+ L+LAPTRELA QI +
Sbjct: 289 AIMSGRDVIGISKTGSGKTISYLLPLLRQVKAQRPLSKHETGPMGLILAPTRELALQIHE 348

Query: 279 VASEFGNS-SYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNL---QR 446
             ++F  + + +R+ C  GG+  ++Q  DL+RG EIV+ATPGR ID L      L   +R
Sbjct: 349 EVTKFTEADTSIRSVCCTGGSEMKKQITDLKRGTEIVVATPGRFIDILTLNDGKLLSTKR 408

Query: 447 CTYLVLDEADRMLDMGFEPQIRKIIDQIRPDRQTLMWSATWPKEVRKLAEDYLXDYVQIN 626
            T++V+DEADR+ D+GFEPQI +I+  +RPD+Q +++SAT+P ++R  A   L   + I 
Sbjct: 409 ITFVVMDEADRLFDLGFEPQITQIMKTVRPDKQCVLFSATFPNKLRSFAVRVLHSPISIT 468

Query: 627 IGSLQLSANHNILQIVDVCQEHEKENKLNVLLQEIGQNQD 746
           I S  +  N N+ Q   +C  H ++ K + L+Q I +  +
Sbjct: 469 INSKGM-VNENVKQKFRIC--HSEDEKFDNLVQLIHERSE 505


>UniRef50_Q4PDT1 Cluster: ATP-dependent RNA helicase DBP3; n=1;
           Ustilago maydis|Rep: ATP-dependent RNA helicase DBP3 -
           Ustilago maydis (Smut fungus)
          Length = 585

 Score =  175 bits (426), Expect = 2e-42
 Identities = 100/240 (41%), Positives = 143/240 (59%), Gaps = 13/240 (5%)
 Frame = +3

Query: 105 LCQGKNLVGVAQTGSGKTLAYILPAIVHINNQPPI-------RRGDGPIALVLAPTRELA 263
           L Q K++VG+A+TGSGKT A+ LPA+ H+  +  +        +G     LV+APTRELA
Sbjct: 193 LLQNKDVVGIAETGSGKTFAFGLPALQHLVTKHKVLDSGKKKAKGAQVNVLVIAPTRELA 252

Query: 264 QQIQQVASEFGNSSYVRNTCVFGGAPKREQARDLERG--VEIVIATPGRLIDFLEKGTTN 437
            Q ++  ++ G S  +   C++GG  K+EQ R L +   V IV+ TPGR++D    G+ +
Sbjct: 253 IQTEENMAKLGKSMGIGMICLYGGVSKQEQVRLLNQSPPVRIVVGTPGRVLDMARDGSLD 312

Query: 438 LQRCTYLVLDEADRMLDMGFEPQIRKIIDQIR---PDRQTLMWSATWPKEVRKLAEDYLX 608
           L   TYLVLDEADRMLD GFEP IR II   +     R T M+SATWP  VR LAE ++ 
Sbjct: 313 LSGVTYLVLDEADRMLDKGFEPDIRAIIGMCKSREEGRHTSMFSATWPPAVRGLAESFMN 372

Query: 609 DYVQINIGSLQLSANHNILQIVDVCQE-HEKENKLNVLLQEIGQNQDPGARPLYLLKLKE 785
             V++ +GS +LSAN  + Q V+V  + + KE +LN  L+ +   +      ++ L  KE
Sbjct: 373 GPVRVTVGSDELSANRRVEQTVEVLADGYAKERRLNDFLRSVNAQRSKDKILIFALYKKE 432


>UniRef50_Q65XX1 Cluster: Vasa-and belle-like helicase protein 1,
           isoform c; n=4; Caenorhabditis|Rep: Vasa-and belle-like
           helicase protein 1, isoform c - Caenorhabditis elegans
          Length = 660

 Score =  175 bits (425), Expect = 3e-42
 Identities = 105/229 (45%), Positives = 145/229 (63%), Gaps = 16/229 (6%)
 Frame = +3

Query: 102 SLCQGKNLVGVAQTGSGKTLAYILPAIVHINN------QPPI----RRGDGPIALVLAPT 251
           +L   ++L+  AQTGSGKT A++LP I HI        +PP     RR   P ALVL+PT
Sbjct: 172 TLLANRDLMSCAQTGSGKTAAFLLPIIQHILAGGPDMVKPPAFTNGRRTYYPCALVLSPT 231

Query: 252 RELAQQIQQVASEFGNSSYVRNTCVFGGAPK-REQARDLERGVEIVIATPGRLIDFLEKG 428
           RELA QI + A++F   S ++   ++GG    R+Q   L  G  I+IATPGRLID +E+G
Sbjct: 232 RELAIQIHKEATKFSYKSNIQTAILYGGRENYRDQVNRLRAGTHILIATPGRLIDIIEQG 291

Query: 429 TTNLQRCTYLVLDEADRMLDMGFEPQIRKIIDQIRPD---RQTLMWSATWPKEVRKLAED 599
              L  C YLVLDEADRMLDMGFEPQIRKI+ Q  P    R T M+SAT+PKE++ LA+D
Sbjct: 292 FIGLAGCRYLVLDEADRMLDMGFEPQIRKIVGQGMPPKTARTTAMFSATFPKEIQVLAKD 351

Query: 600 YLXD-YVQINIGSLQLSANHNILQ-IVDVCQEHEKENKLNVLLQEIGQN 740
           +L D Y+ + +G +  S + NI Q ++ V +  ++ N + +L+ E  +N
Sbjct: 352 FLKDNYIFLAVGRVG-STSENIEQRLLWVNEMEKRSNLMEILMNEHSEN 399


>UniRef50_Q0FAJ4 Cluster: Dead-box ATP-dependent RNA helicase; n=6;
            Alphaproteobacteria|Rep: Dead-box ATP-dependent RNA
            helicase - alpha proteobacterium HTCC2255
          Length = 531

 Score =  174 bits (424), Expect = 4e-42
 Identities = 109/299 (36%), Positives = 161/299 (53%)
 Frame = +3

Query: 102  SLCQGKNLVGVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQV 281
            ++   K+LVG+AQTG+GKT A+ LP I  +   P   +G    A++L+PTRELA QI + 
Sbjct: 136  AVLNSKDLVGLAQTGTGKTAAFALPLIQQLLMNPIAIKGRSARAIILSPTRELALQIHEA 195

Query: 282  ASEFGNSSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLV 461
               FG    +  T   GGAP R+Q RDL +GV+I++ATPGRL D +++    L    +LV
Sbjct: 196  FVSFGKRLPLNFTHAIGGAPIRKQMRDLSKGVDILVATPGRLEDLVDQKGLRLDETKFLV 255

Query: 462  LDEADRMLDMGFEPQIRKIIDQIRPDRQTLMWSATWPKEVRKLAEDYLXDYVQINIGSLQ 641
            LDEAD+MLD+GF P +++II ++  DRQTL++SAT  KE++KL E YL D VQ+++    
Sbjct: 256  LDEADQMLDIGFLPAVKRIISKVNKDRQTLLFSATMSKEIKKLTETYLTDPVQVSV---- 311

Query: 642  LSANHNILQIVDVCQEHEKENKLNVLLQEIGQNQDPGARPLYLLKLKEKRXTXPEISDDM 821
               N  + +I        K+NK  + LQ I  + +P  R +   + K       +     
Sbjct: 312  TPENSTVDKIEQSLMHLSKQNK-GLALQRI-ISANPKKRVIVFSRTKHGSDKLVKWLGTQ 369

Query: 822  DGQLCACTXTNTARKG*SXXPILKRVVSSILVATDVGCXRS*CGMGSNFXINFDXPXXP 998
            +    A     +  +        K+  + IL+ATD+   R     G    INFD P  P
Sbjct: 370  NIGADAIHGNKSQGQRQRALDDFKKGKTYILIATDIAA-RGIDIPGIEIVINFDLPNVP 427


>UniRef50_Q5CP59 Cluster: DEAD box polypeptide, Y
           chromosome-related; n=3; Apicomplexa|Rep: DEAD box
           polypeptide, Y chromosome-related - Cryptosporidium
           hominis
          Length = 702

 Score =  173 bits (421), Expect = 1e-41
 Identities = 95/227 (41%), Positives = 149/227 (65%), Gaps = 15/227 (6%)
 Frame = +3

Query: 102 SLCQGKNLVGVAQTGSGKTLAYILPAIVH-INNQPP---------IRRGDGPIALVLAPT 251
           ++  G++L+  AQTGSGKT A++ P ++  +N+ PP         I+R   P+ALVL+PT
Sbjct: 234 TVLNGRDLMACAQTGSGKTAAFLFPIVMKMLNDGPPPTPQQSSLRIKRMAYPVALVLSPT 293

Query: 252 RELAQQIQQVASEFGNSSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGT 431
           RELA Q  + + +F   + +R   ++GG+  R Q  DL+RG +I++ATPGRL D +++G 
Sbjct: 294 RELAIQTYEESRKFCFGTGIRTNVLYGGSEVRSQIMDLDRGSDIIVATPGRLRDLIDRGK 353

Query: 432 TNLQRCTYLVLDEADRMLDMGFEPQIRKII-DQIRP----DRQTLMWSATWPKEVRKLAE 596
            NL+   +L+LDEADRMLDMGF PQIR+I+ D   P     RQT+M+SAT+P+E+++LA+
Sbjct: 354 VNLKLIKFLILDEADRMLDMGFAPQIREIVEDSEMPHSLDGRQTVMFSATFPREIQQLAK 413

Query: 597 DYLXDYVQINIGSLQLSANHNILQIVDVCQEHEKENKLNVLLQEIGQ 737
           D+L +Y+ + +G +  ++  +I+Q V   +E  K   L  LL E G+
Sbjct: 414 DFLHNYIFLTVGRVGATSG-SIVQRVVYAEEDHKPRLLVKLLLEQGE 459


>UniRef50_Q754U8 Cluster: Pre-mRNA-processing ATP-dependent RNA
           helicase PRP5; n=2; Saccharomycetaceae|Rep:
           Pre-mRNA-processing ATP-dependent RNA helicase PRP5 -
           Ashbya gossypii (Yeast) (Eremothecium gossypii)
          Length = 816

 Score =  173 bits (420), Expect = 1e-41
 Identities = 87/207 (42%), Positives = 137/207 (66%), Gaps = 5/207 (2%)
 Frame = +3

Query: 102 SLCQGKNLVGVAQTGSGKTLAYILPAIVHINNQPPIRRGD-GPIALVLAPTRELAQQIQQ 278
           ++  G++++G+++TGSGKT+++ILP +  I  Q P+   + GP+ L+L+PTRELA QI +
Sbjct: 270 AIMSGRDVIGISKTGSGKTVSFILPLLRQIKAQRPLGGDETGPLGLILSPTRELALQIHE 329

Query: 279 VASEFGNSS-YVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNL---QR 446
             ++F +    +R+ C  GG+  + Q  D++RGVEIVIATPGR ID L   + NL   +R
Sbjct: 330 EVTKFTSGDPSIRSLCCTGGSELKRQINDIKRGVEIVIATPGRFIDLLSLNSGNLINPKR 389

Query: 447 CTYLVLDEADRMLDMGFEPQIRKIIDQIRPDRQTLMWSATWPKEVRKLAEDYLXDYVQIN 626
             ++V+DEADR+ D+GFEPQ+ +I+  IRPD+Q +++SAT+P +++  A   L D V I 
Sbjct: 390 IVFVVMDEADRLFDLGFEPQVNQIMKCIRPDKQCVLFSATFPNKLKSFASKILHDPVYIT 449

Query: 627 IGSLQLSANHNILQIVDVCQEHEKENK 707
           + S  L  N NI Q V++    E + K
Sbjct: 450 VNSKSL-INENIEQKVEIFSNEEDKFK 475


>UniRef50_P24784 Cluster: ATP-dependent RNA helicase DBP1; n=103;
           Eukaryota|Rep: ATP-dependent RNA helicase DBP1 -
           Saccharomyces cerevisiae (Baker's yeast)
          Length = 617

 Score =  170 bits (414), Expect = 7e-41
 Identities = 96/218 (44%), Positives = 138/218 (63%), Gaps = 14/218 (6%)
 Frame = +3

Query: 111 QGKNLVGVAQTGSGKTLAYILPAIVHINNQPP----------IRRGDGPIALVLAPTREL 260
           +G++L+  AQTGSGKT  ++ P    +    P            R   P ALVLAPTREL
Sbjct: 190 KGRDLMACAQTGSGKTGGFLFPLFTELFRSGPSPVPEKAQSFYSRKGYPSALVLAPTREL 249

Query: 261 AQQIQQVASEFGNSSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNL 440
           A QI + A +F   S+VR   V+GGAP   Q R+++RG ++++ATPGRL D LE+G  +L
Sbjct: 250 ATQIFEEARKFTYRSWVRPCVVYGGAPIGNQMREVDRGCDLLVATPGRLNDLLERGKVSL 309

Query: 441 QRCTYLVLDEADRMLDMGFEPQIRKIIDQIR----PDRQTLMWSATWPKEVRKLAEDYLX 608
               YLVLDEADRMLDMGFEPQIR I+++       +RQTLM+SAT+P +++ LA D+L 
Sbjct: 310 ANIKYLVLDEADRMLDMGFEPQIRHIVEECDMPSVENRQTLMFSATFPVDIQHLARDFLD 369

Query: 609 DYVQINIGSLQLSANHNILQIVDVCQEHEKENKLNVLL 722
           +Y+ +++G +  S + NI Q +    + +K++ L  LL
Sbjct: 370 NYIFLSVGRVG-STSENITQRILYVDDMDKKSALLDLL 406


>UniRef50_Q10202 Cluster: ATP-dependent RNA helicase dbp3; n=1;
           Schizosaccharomyces pombe|Rep: ATP-dependent RNA
           helicase dbp3 - Schizosaccharomyces pombe (Fission
           yeast)
          Length = 578

 Score =  169 bits (411), Expect = 2e-40
 Identities = 95/215 (44%), Positives = 137/215 (63%), Gaps = 7/215 (3%)
 Frame = +3

Query: 105 LCQGKNLVGVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVA 284
           L  G+++VG+A+TGSGKT+A+ +PA+ ++N     +    P  LV++PTRELA Q  +  
Sbjct: 199 LLAGRDVVGIAETGSGKTVAFGIPALQYLNGLSDNK--SVPRVLVVSPTRELAIQTYENL 256

Query: 285 SEFGNSSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVL 464
           +     + ++   V+GGAPK EQAR   +   ++I TPGRL+D +  G+ +  +  YLVL
Sbjct: 257 NSLIQGTNLKAVVVYGGAPKSEQAR-AAKNASVIIGTPGRLLDLINDGSIDCSQVGYLVL 315

Query: 465 DEADRMLDMGFEPQIRKIIDQIRPD------RQTLMWSATWPKEVRKLAEDYLXDYVQIN 626
           DEADRMLD GFE  IR II    PD      RQT+ +SATWP+ VR LA  +L D V+I 
Sbjct: 316 DEADRMLDTGFEQDIRNIISH-TPDPTRNGSRQTVFFSATWPESVRALAATFLKDPVKIT 374

Query: 627 IGSLQLSANHNILQIVDVCQE-HEKENKLNVLLQE 728
           IGS +L+A+ NI QIV++  +   KE  L+ LL++
Sbjct: 375 IGSDELAASQNITQIVEILDDPRSKERMLDNLLRK 409


>UniRef50_A2DES1 Cluster: DEAD/DEAH box helicase family protein;
           n=1; Trichomonas vaginalis G3|Rep: DEAD/DEAH box
           helicase family protein - Trichomonas vaginalis G3
          Length = 640

 Score =  169 bits (410), Expect = 2e-40
 Identities = 87/216 (40%), Positives = 135/216 (62%)
 Frame = +3

Query: 105 LCQGKNLVGVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVA 284
           +  G++++G A TGSGKTLA+I+P ++H+  QPP  + +   A++L+PTRELA Q     
Sbjct: 135 ILSGRDIIGCAVTGSGKTLAFIIPCLLHVLAQPPTGQYEAA-AVILSPTRELAYQTHIEC 193

Query: 285 SEFGNSSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVL 464
            +  +    ++ C+ GG     Q R ++ G  ++IATPGR ID L     N+++ +YLV+
Sbjct: 194 QKIFSLMDKKSACLVGGNDIENQLRAIKNGSNVIIATPGRFIDLLSSSAFNIKKVSYLVI 253

Query: 465 DEADRMLDMGFEPQIRKIIDQIRPDRQTLMWSATWPKEVRKLAEDYLXDYVQINIGSLQL 644
           DEADRM D+GFEPQ+ +I +++R DRQTLM+SAT+P  V ++A   L + ++I +G L+ 
Sbjct: 254 DEADRMFDLGFEPQVIRIAERMRKDRQTLMFSATFPHTVERIARKLLQNSIEIVVG-LRN 312

Query: 645 SANHNILQIVDVCQEHEKENKLNVLLQEIGQNQDPG 752
               NI Q + V  E   +NK N LL+ +G     G
Sbjct: 313 VVTPNINQSILVTNE---DNKFNSLLKILGDYTTQG 345


>UniRef50_Q388E8 Cluster: ATP-dependent DEAD/H RNA helicase,
           putative; n=3; Trypanosoma|Rep: ATP-dependent DEAD/H RNA
           helicase, putative - Trypanosoma brucei
          Length = 660

 Score =  168 bits (408), Expect = 4e-40
 Identities = 94/216 (43%), Positives = 136/216 (62%), Gaps = 12/216 (5%)
 Frame = +3

Query: 117 KNLVGVAQTGSGKTLAYILPAI----VHINNQPPIRRGD--GPIALVLAPTRELAQQIQQ 278
           ++L+  AQTGSGKT +Y++PAI    ++I+N+PP   G    P AL+LAPTREL+ QI  
Sbjct: 195 RDLMACAQTGSGKTASYLIPAINEILLNISNRPPYSPGSHSSPQALILAPTRELSLQIYG 254

Query: 279 VASEFGNSSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYL 458
            A +F   + VR   V+GGA  R Q  +L RG ++++ATPGRL+D   +G        +L
Sbjct: 255 EARKFTYHTPVRCVVVYGGADPRHQVHELSRGCKLLVATPGRLMDMFSRGYVRFSEIRFL 314

Query: 459 VLDEADRMLDMGFEPQIRKII---DQIRP---DRQTLMWSATWPKEVRKLAEDYLXDYVQ 620
           +LDEADRMLDMGFEPQIR I+   D   P    RQTL++SAT+P E+++LA +++  +  
Sbjct: 315 ILDEADRMLDMGFEPQIRMIVQGPDSDMPRAGQRQTLLYSATFPVEIQRLAREFMCRHSF 374

Query: 621 INIGSLQLSANHNILQIVDVCQEHEKENKLNVLLQE 728
           + +G +  S   NI Q V   ++ +K   L  LL+E
Sbjct: 375 LQVGRVG-STTENITQDVRWIEDPDKRQALLTLLRE 409


>UniRef50_P93008 Cluster: DEAD-box ATP-dependent RNA helicase 21; n=8;
            Viridiplantae|Rep: DEAD-box ATP-dependent RNA helicase 21
            - Arabidopsis thaliana (Mouse-ear cress)
          Length = 733

 Score =  168 bits (408), Expect = 4e-40
 Identities = 97/229 (42%), Positives = 141/229 (61%), Gaps = 20/229 (8%)
 Frame = +3

Query: 111  QGKNLVGVAQTGSGKTLAYILPAIVHINNQPPI---RRGDGPIALVLAPTRELAQQIQQV 281
            Q ++++G+A+TGSGKT A++LP + +I+  PP+      +GP A+V+APTRELAQQI++ 
Sbjct: 349  QQRDVIGIAETGSGKTAAFVLPMLAYISRLPPMSEENETEGPYAVVMAPTRELAQQIEEE 408

Query: 282  ASEFGNSSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLV 461
              +F +    R T + GG    EQ   + +G EIVIATPGRLID LE+    L +C Y+V
Sbjct: 409  TVKFAHYLGFRVTSIVGGQSIEEQGLKITQGCEIVIATPGRLIDCLERRYAVLNQCNYVV 468

Query: 462  LDEADRMLDMGFEPQIRKIID-----QIRPD------------RQTLMWSATWPKEVRKL 590
            LDEADRM+DMGFEPQ+  ++D      ++P+            R T M+SAT P  V +L
Sbjct: 469  LDEADRMIDMGFEPQVAGVLDAMPSSNLKPENEEEELDEKKIYRTTYMFSATMPPGVERL 528

Query: 591  AEDYLXDYVQINIGSLQLSANHNILQIVDVCQEHEKENKLNVLLQEIGQ 737
            A  YL + V + IG+   + +  I Q V + +E EK  +L  LL E+G+
Sbjct: 529  ARKYLRNPVVVTIGTAGKTTD-LISQHVIMMKESEKFFRLQKLLDELGE 576


>UniRef50_UPI0000F3242A Cluster: Probable ATP-dependent RNA helicase
           DDX43 (EC 3.6.1.-) (DEAD box protein 43) (DEAD box
           protein HAGE) (Helical antigen).; n=1; Bos taurus|Rep:
           Probable ATP-dependent RNA helicase DDX43 (EC 3.6.1.-)
           (DEAD box protein 43) (DEAD box protein HAGE) (Helical
           antigen). - Bos Taurus
          Length = 597

 Score =  167 bits (407), Expect = 5e-40
 Identities = 80/153 (52%), Positives = 110/153 (71%), Gaps = 1/153 (0%)
 Frame = +3

Query: 105 LCQGKNLVGVAQTGSGKTLAYILPAIVHINNQPPIRRG-DGPIALVLAPTRELAQQIQQV 281
           + QG +L+GVAQTG+GKTL+Y++P  +HI++QP ++R  +GP  LVL PTRELA Q+   
Sbjct: 275 ILQGIDLIGVAQTGTGKTLSYLMPGFIHIDSQPVLQRARNGPGMLVLTPTRELALQVDAE 334

Query: 282 ASEFGNSSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLV 461
            SE+     +++ C++GG  +  Q +DL +G +I+IATPGRL D        L+  TYLV
Sbjct: 335 CSEYSYRG-LKSVCIYGGGDRDGQIKDLSKGADIIIATPGRLHDLQMNNFVYLKSITYLV 393

Query: 462 LDEADRMLDMGFEPQIRKIIDQIRPDRQTLMWS 560
           LDEAD+MLDMGFEPQI KI+  +RPDRQT+M S
Sbjct: 394 LDEADKMLDMGFEPQIMKILLDVRPDRQTVMTS 426


>UniRef50_A2DH37 Cluster: DEAD/DEAH box helicase family protein;
           n=2; Trichomonas vaginalis G3|Rep: DEAD/DEAH box
           helicase family protein - Trichomonas vaginalis G3
          Length = 541

 Score =  167 bits (407), Expect = 5e-40
 Identities = 93/214 (43%), Positives = 137/214 (64%), Gaps = 5/214 (2%)
 Frame = +3

Query: 105 LCQGKNLVGVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVA 284
           +  G++L+  +QTGSGKT A++LP I  +           P  + L PTRELA QI +  
Sbjct: 155 ILNGEDLIVTSQTGSGKTAAFMLPVITQLIGTC---HSPNPSCVALCPTRELAIQIFEET 211

Query: 285 SEFGNSSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVL 464
            +F   + ++ TCVFGGAP  EQ R+L RG++IVIATPGRLID L++    L    +L+L
Sbjct: 212 RKFCKGTDLKTTCVFGGAPITEQIRNLSRGIDIVIATPGRLIDILKQHCITLSEVRFLIL 271

Query: 465 DEADRMLDMGFEPQIRKIID--QIRP--DRQTLMWSATWPKEVRKLAEDYL-XDYVQINI 629
           DEADRMLDMGFEPQ++++I+   + P  DRQT+++SAT+P  VR LA D++   Y +I++
Sbjct: 272 DEADRMLDMGFEPQMQEVINGWDMPPADDRQTMLFSATFPDAVRNLARDFMRPKYCRISV 331

Query: 630 GSLQLSANHNILQIVDVCQEHEKENKLNVLLQEI 731
           G     A  +I Q    C E +K ++L  +++E+
Sbjct: 332 G--MQDAPKSIEQRFIYCSEMDKFSELLGVIKEV 363


>UniRef50_Q6FML5 Cluster: Pre-mRNA-processing ATP-dependent RNA
            helicase PRP5; n=1; Candida glabrata|Rep:
            Pre-mRNA-processing ATP-dependent RNA helicase PRP5 -
            Candida glabrata (Yeast) (Torulopsis glabrata)
          Length = 816

 Score =  167 bits (407), Expect = 5e-40
 Identities = 91/280 (32%), Positives = 157/280 (56%), Gaps = 4/280 (1%)
 Frame = +3

Query: 102  SLCQGKNLVGVAQTGSGKTLAYILPAIVHINNQPPIRRGD-GPIALVLAPTRELAQQIQQ 278
            ++  G++++G+++TGSGKT++Y+LP I H+  Q  +R G+ GPIA++ APTRELA QI +
Sbjct: 285  AIMSGRDVIGISKTGSGKTISYLLPMIRHVKAQKKLRNGETGPIAVIFAPTRELAVQINE 344

Query: 279  VASEFGNSSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQ---RC 449
               +  +   + + C  GG+  ++Q   L+ GVEI IATPGR ID L     NL    R 
Sbjct: 345  EVQKLISDLDISSICCTGGSDLKKQIDKLKTGVEIAIATPGRFIDLLSLNGGNLVSTLRI 404

Query: 450  TYLVLDEADRMLDMGFEPQIRKIIDQIRPDRQTLMWSATWPKEVRKLAEDYLXDYVQINI 629
            +++V+DEADR+ D GFEPQI  ++  +RPDRQ +++SAT+P +V   A  +L   +QI +
Sbjct: 405  SFVVMDEADRLFDFGFEPQIASVLRTVRPDRQCVLFSATFPSKVSNFASRFLDSPLQITV 464

Query: 630  GSLQLSANHNILQIVDVCQEHEKENKLNVLLQEIGQNQDPGARPLYLLKLKEKRXTXPEI 809
             + +   N  I Q   +C +   + K  + L ++  ++    + +  +  ++      + 
Sbjct: 465  NA-EGMVNERINQKFTICSDESDKFKELLSLLKVFNSETVDEKTIIFVSSQQICDIIEKR 523

Query: 810  SDDMDGQLCACTXTNTARKG*SXXPILKRVVSSILVATDV 929
              D   +L +        +      + K+  +SIL+ T+V
Sbjct: 524  LTDYSEKLYSIHAGRPYNERRQNLELFKKTSNSILLCTEV 563


>UniRef50_Q9BUQ8 Cluster: Probable ATP-dependent RNA helicase DDX23;
            n=50; Eumetazoa|Rep: Probable ATP-dependent RNA helicase
            DDX23 - Homo sapiens (Human)
          Length = 820

 Score =  167 bits (407), Expect = 5e-40
 Identities = 115/303 (37%), Positives = 156/303 (51%), Gaps = 30/303 (9%)
 Frame = +3

Query: 111  QGKNLVGVAQTGSGKTLAYILPAIVHINNQPPIRR----GDGPIALVLAPTRELAQQIQQ 278
            Q ++++GVA+TGSGKT A+++P +V I   P I R      GP A++LAPTRELAQQI++
Sbjct: 427  QNRDIIGVAETGSGKTAAFLIPLLVWITTLPKIDRIEESDQGPYAIILAPTRELAQQIEE 486

Query: 279  VASEFGNSSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYL 458
               +FG    +R   V GG  + +Q   L  G EIVIATPGRLID LE     L RCTY+
Sbjct: 487  ETIKFGKPLGIRTVAVIGGISREDQGFRLRMGCEIVIATPGRLIDVLENRYLVLSRCTYV 546

Query: 459  VLDEADRMLDMGFEPQIRKIIDQI-----RPD---------------------RQTLMWS 560
            VLDEADRM+DMGFEP ++KI++ +     +PD                     RQT+M++
Sbjct: 547  VLDEADRMIDMGFEPDVQKILEHMPVSNQKPDTDEAEDPEKMLANFESGKHKYRQTVMFT 606

Query: 561  ATWPKEVRKLAEDYLXDYVQINIGSLQLSANHNILQIVDVCQEHEKENKLNVLLQEIGQN 740
            AT P  V +LA  YL     + IGS     +  + Q V +  E EK  KL  +L+   Q 
Sbjct: 607  ATMPPAVERLARSYLRRPAVVYIGSAG-KPHERVEQKVFLMSESEKRKKLLAILE---QG 662

Query: 741  QDPGARPLYLLKLKEKRXTXPEISDDMDGQLCACTXTNTARKG*SXXPILKRVVSSILVA 920
             DP    +  +  K+      +  + M    C         +       LK     ILVA
Sbjct: 663  FDPPI--IIFVNQKKGCDVLAKSLEKMGYNACTLHGGKGQEQREFALSNLKAGAKDILVA 720

Query: 921  TDV 929
            TDV
Sbjct: 721  TDV 723


>UniRef50_A0D361 Cluster: Chromosome undetermined scaffold_36, whole
            genome shotgun sequence; n=4; Paramecium tetraurelia|Rep:
            Chromosome undetermined scaffold_36, whole genome shotgun
            sequence - Paramecium tetraurelia
          Length = 813

 Score =  167 bits (406), Expect = 7e-40
 Identities = 96/209 (45%), Positives = 132/209 (63%), Gaps = 10/209 (4%)
 Frame = +3

Query: 105  LCQGKNLVGVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVA 284
            + +G++++ +A+TGSGKTLAY LP I+H   QP +    GP  LVLAPTRELAQQIQ   
Sbjct: 466  ILEGRDVIAIAETGSGKTLAYALPGIIHSQAQPKVL---GPRILVLAPTRELAQQIQ--- 519

Query: 285  SEFGNSSYVRNTCVFGGAPKR---------EQARDLERGVEIVIATPGRLIDFLEKGTTN 437
            S++    + R  CV+GG  K          +++R+      ++I+TPGRL+DF++ G   
Sbjct: 520  SQY--ELFTRTCCVYGGVFKNLQYSEILGIKESRNKINLPSVIISTPGRLLDFMKDGLP- 576

Query: 438  LQRCTYLVLDEADRMLDMGFEPQIRKIIDQIRPDRQTLMWSATWPKEVRKLAEDYL-XDY 614
            L   T +VLDEADRMLDMGFE QI +I+  +R DRQTL +SATWP EV++LA      D 
Sbjct: 577  LNSITQVVLDEADRMLDMGFEDQITQILSAVRDDRQTLFFSATWPNEVQRLANSLCNQDP 636

Query: 615  VQINIGSLQLSANHNILQIVDVCQEHEKE 701
            + I +G   LS N NI Q V +  E++ E
Sbjct: 637  IMIQLGEQGLSVNKNIQQEVIIVYENKFE 665


>UniRef50_A2G6R5 Cluster: DEAD/DEAH box helicase family protein; n=1;
            Trichomonas vaginalis G3|Rep: DEAD/DEAH box helicase
            family protein - Trichomonas vaginalis G3
          Length = 865

 Score =  166 bits (404), Expect = 1e-39
 Identities = 90/235 (38%), Positives = 146/235 (62%), Gaps = 1/235 (0%)
 Frame = +3

Query: 114  GKNLVGVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVASEF 293
            G NLVG+AQTGSGKT AY++PAI ++ NQ   R   GP  L++A TREL +QIQ+     
Sbjct: 523  GMNLVGIAQTGSGKTAAYLIPAITYVINQNKKR---GPHVLIMANTRELVKQIQEFGEIL 579

Query: 294  GNSSYVRNTCVFGGAP-KREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDE 470
              ++ V+    +GG   +R+Q RD+  G +I+ A PGRL+DF+       +    +V+DE
Sbjct: 580  TKNTSVKVAVAYGGENNRRQQIRDIA-GADIIAAAPGRLLDFIRNNNIKPESIGIVVIDE 638

Query: 471  ADRMLDMGFEPQIRKIIDQIRPDRQTLMWSATWPKEVRKLAEDYLXDYVQINIGSLQLSA 650
            AD+M+   FEPQ + +I +   + QTLM+SATWP EV+ +A++YL +Y+++ + S +L+ 
Sbjct: 639  ADKMVSNDFEPQCKAVISRCPKNIQTLMFSATWPDEVQFMAQNYLGEYIRVIVNSRELTI 698

Query: 651  NHNILQIVDVCQEHEKENKLNVLLQEIGQNQDPGARPLYLLKLKEKRXTXPEISD 815
            N NI Q+V + ++ +   +L  +++ I +++   + P  ++  K KR T  E  D
Sbjct: 699  NINIKQMV-IEKDRDSLRQLGEIVEGIKRSKGNESYPKIIIFCKTKR-TVEEAHD 751


>UniRef50_Q01PH0 Cluster: DEAD/DEAH box helicase domain protein;
           n=1; Solibacter usitatus Ellin6076|Rep: DEAD/DEAH box
           helicase domain protein - Solibacter usitatus (strain
           Ellin6076)
          Length = 422

 Score =  165 bits (401), Expect = 3e-39
 Identities = 87/205 (42%), Positives = 128/205 (62%)
 Frame = +3

Query: 114 GKNLVGVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVASEF 293
           GK++V  AQTG+GKTLA++LP I  ++ +P   R  G  AL+L PTRELA QI +   + 
Sbjct: 39  GKDIVATAQTGTGKTLAFLLPTIQLLSTEP---RQPGVRALILTPTRELALQINEALLQI 95

Query: 294 GNSSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEA 473
              + +R     GG  +R Q RD+  G  IV+ATPGRL DF+ +G  NL     L+LDE+
Sbjct: 96  ARGTGIRAAVAVGGLNERSQLRDIRGGANIVVATPGRLYDFMSRGLINLTTVRMLILDES 155

Query: 474 DRMLDMGFEPQIRKIIDQIRPDRQTLMWSATWPKEVRKLAEDYLXDYVQINIGSLQLSAN 653
           DRMLDMGF P I++II  +  +RQTL++SAT    V++L E ++ + V+I +GS+   + 
Sbjct: 156 DRMLDMGFLPTIKRIIAAMPAERQTLLFSATLESSVKQLVETHVRNAVRIELGSISKPSE 215

Query: 654 HNILQIVDVCQEHEKENKLNVLLQE 728
              L + +V Q+  K   L ++L+E
Sbjct: 216 QVDLHLYEVDQD-RKFGLLEMMLRE 239


>UniRef50_A3FQ46 Cluster: U5 snRNP 100 kD protein, putative; n=2;
           Cryptosporidium|Rep: U5 snRNP 100 kD protein, putative -
           Cryptosporidium parvum Iowa II
          Length = 529

 Score =  164 bits (399), Expect = 5e-39
 Identities = 85/207 (41%), Positives = 136/207 (65%), Gaps = 9/207 (4%)
 Frame = +3

Query: 117 KNLVGVAQTGSGKTLAYILPAIVHINNQPPI---RRGDGPIALVLAPTRELAQQIQQVAS 287
           ++++G+A+TGSGKT+A+++P I ++ N+P +      +GP  L+LAP RELA QI+  A 
Sbjct: 180 RDMIGIAETGSGKTIAFLIPLISYVGNKPILDYKTSQEGPYGLILAPARELALQIEDEAQ 239

Query: 288 EFGNSSY----VRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTY 455
           +  N ++    +R   + GG    +QA  L +GVEI+IATPGR+ D LEK  T L +C+Y
Sbjct: 240 KLLNKTHELKRIRTLSIVGGRNIDQQAFSLRKGVEIIIATPGRMQDCLEKTLTVLVQCSY 299

Query: 456 LVLDEADRMLDMGFEPQIRKIIDQIRPD--RQTLMWSATWPKEVRKLAEDYLXDYVQINI 629
           ++LDEADRM+D+GF+  +  I+DQI P+  R T M+SAT  KE+  +A+ YL   + + I
Sbjct: 300 VILDEADRMIDLGFQDSLNFILDQIPPEIQRTTHMFSATMQKELENIAKRYLNSPINVTI 359

Query: 630 GSLQLSANHNILQIVDVCQEHEKENKL 710
           G +  +   +I QI++   E++K++ L
Sbjct: 360 GDIG-AGKKSIQQILNFISENKKKSTL 385


>UniRef50_Q66WQ1 Cluster: DEAD box DNA helicase; n=2; Plasmodium
           falciparum|Rep: DEAD box DNA helicase - Plasmodium
           falciparum
          Length = 516

 Score =  163 bits (395), Expect = 1e-38
 Identities = 80/177 (45%), Positives = 115/177 (64%), Gaps = 1/177 (0%)
 Frame = +3

Query: 213 RGDGPIALVLAPTRELAQQIQQVASEFGNSSYVRNTCVFGGAPKREQARDLERGVEIVIA 392
           R      L+L PTREL  Q+      F  +  +++  V+GG PK  Q  +L++G +I++A
Sbjct: 198 RASDTYGLILLPTRELCLQVLDEIKSFEKNLPIKSVAVYGGVPKYYQINNLKKGADIIVA 257

Query: 393 TPGRLIDFLEKGTTNLQRCTYLVLDEADRMLDMGFEPQIRKIIDQIRPDRQTLMWSATWP 572
           TPGRL+DFLE G  NL +C Y+V+DEADR+LDMGFE Q+RKI+ Q+  ++Q L  +ATWP
Sbjct: 258 TPGRLLDFLENGNINLLKCIYVVIDEADRLLDMGFEKQLRKIMTQVNKNKQLLFLTATWP 317

Query: 573 KEVRKLAEDY-LXDYVQINIGSLQLSANHNILQIVDVCQEHEKENKLNVLLQEIGQN 740
           ++VRKLA D+   D V+I IG  +L+AN NI Q V +    + + KL   L+E  +N
Sbjct: 318 EQVRKLAYDFCAYDPVKIQIGKNELTANKNIEQNVIISSSIDMKKKLLDWLKENYEN 374



 Score = 46.0 bits (104), Expect = 0.003
 Identities = 18/26 (69%), Positives = 24/26 (92%)
 Frame = +3

Query: 114 GKNLVGVAQTGSGKTLAYILPAIVHI 191
           GK+L+GVA+TGSGKTLA++LP  +HI
Sbjct: 98  GKDLIGVAETGSGKTLAFVLPCFMHI 123


>UniRef50_Q95QN2 Cluster: Putative uncharacterized protein; n=2;
            Caenorhabditis|Rep: Putative uncharacterized protein -
            Caenorhabditis elegans
          Length = 730

 Score =  162 bits (394), Expect = 2e-38
 Identities = 93/235 (39%), Positives = 138/235 (58%), Gaps = 30/235 (12%)
 Frame = +3

Query: 111  QGKNLVGVAQTGSGKTLAYILPAIVHINNQPPIRRGD----GPIALVLAPTRELAQQIQQ 278
            Q ++++GVA+TGSGKT A++LP +V I + P + R +    GP A+++APTRELAQQI++
Sbjct: 337  QNRDVIGVAETGSGKTAAFLLPLLVWITSLPKMERQEHRDLGPYAIIMAPTRELAQQIEE 396

Query: 279  VASEFGNSSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYL 458
              ++FG    ++   V GGA + +Q   L  GVE+VIATPGRL+D LE     L +CTY+
Sbjct: 397  ETNKFGKLLGIKTVSVIGGASREDQGMKLRMGVEVVIATPGRLLDVLENRYLLLNQCTYV 456

Query: 459  VLDEADRMLDMGFEPQIRKIIDQIRPD--------------------------RQTLMWS 560
            +LDEADRMLDMGFEP ++K+++ + PD                          RQT+M++
Sbjct: 457  ILDEADRMLDMGFEPDVQKVLEYM-PDTNMKKDTDEFDNEEALMKGFSTREKYRQTVMFT 515

Query: 561  ATWPKEVRKLAEDYLXDYVQINIGSLQLSANHNILQIVDVCQEHEKENKLNVLLQ 725
            AT    + +LA  YL     ++IGS        + Q+V +  E  K  KL  +L+
Sbjct: 516  ATMSSAIERLARQYLRRPAVVHIGSAG-KPTERVEQVVYMVPEDRKRKKLVEVLE 569


>UniRef50_Q8YH70 Cluster: ATP-DEPENDENT RNA HELICASE RHLE; n=10;
           Rhizobiales|Rep: ATP-DEPENDENT RNA HELICASE RHLE -
           Brucella melitensis
          Length = 535

 Score =  161 bits (391), Expect = 4e-38
 Identities = 85/209 (40%), Positives = 124/209 (59%)
 Frame = +3

Query: 102 SLCQGKNLVGVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQV 281
           S  +G++++G+AQTGSGKT A+ LP +  I      RR     AL+LAPTRELA QI+Q 
Sbjct: 120 SQLEGQDILGIAQTGSGKTAAFSLPILQKIIGLGDKRRPKTARALILAPTRELAVQIEQT 179

Query: 282 ASEFGNSSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLV 461
                 S+++    V GG  K  Q + +  G++++IATPGRL D +  G  +L +  +LV
Sbjct: 180 IRNVSKSAHISTALVLGGVSKLSQIKRIAPGIDVLIATPGRLTDLMRDGLVDLSQTRWLV 239

Query: 462 LDEADRMLDMGFEPQIRKIIDQIRPDRQTLMWSATWPKEVRKLAEDYLXDYVQINIGSLQ 641
           LDEADRMLDMGF   +++I      +RQT ++SAT PKE+  LAE  L D V++ +    
Sbjct: 240 LDEADRMLDMGFINDVKRIAKATHAERQTALFSATMPKEIASLAERLLRDPVRVEVAPQG 299

Query: 642 LSANHNILQIVDVCQEHEKENKLNVLLQE 728
            +A+  I Q+V      EK   L+ +L +
Sbjct: 300 ATAS-EITQVVHPVPTKEKRRLLSAMLTD 327


>UniRef50_Q9Y7T7 Cluster: Pre-mRNA-splicing ATP-dependent RNA
           helicase prp28; n=1; Schizosaccharomyces pombe|Rep:
           Pre-mRNA-splicing ATP-dependent RNA helicase prp28 -
           Schizosaccharomyces pombe (Fission yeast)
          Length = 662

 Score =  161 bits (390), Expect = 6e-38
 Identities = 91/229 (39%), Positives = 134/229 (58%), Gaps = 22/229 (9%)
 Frame = +3

Query: 105 LCQGKNLVGVAQTGSGKTLAYILPAIVHINNQPPIRRGD---GPIALVLAPTRELAQQIQ 275
           L Q K+L+G+A+TGSGKT A+I+P I+ I+  PP+   +   GP A+VLAPTRELAQQIQ
Sbjct: 283 LLQRKDLIGIAETGSGKTAAFIIPLIIAISKLPPLTESNMHLGPYAVVLAPTRELAQQIQ 342

Query: 276 QVASEFGNSSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTY 455
              ++F      R   V GG    EQ+  + +G  IV+ATPGRL+D LE+    L +CTY
Sbjct: 343 VEGNKFAEPLGFRCVSVVGGHAFEEQSFQMSQGAHIVVATPGRLLDCLERRLFVLSQCTY 402

Query: 456 LVLDEADRMLDMGFEPQIRKIIDQIRPD-------------------RQTLMWSATWPKE 578
           +V+DEADRMLDMGFE  + KI+  +                      RQT+M+SAT P  
Sbjct: 403 VVMDEADRMLDMGFEDDVNKILSSLPSSNASEKDGSILATANSSSSRRQTIMFSATLPPR 462

Query: 579 VRKLAEDYLXDYVQINIGSLQLSANHNILQIVDVCQEHEKENKLNVLLQ 725
           V  LA+ YL + V + IG++  + +    ++  +  + +K  ++  +L+
Sbjct: 463 VANLAKSYLIEPVMLTIGNIGQAVDRVEQRVEMISDDSKKWRRVEEILE 511


>UniRef50_A7HG33 Cluster: DEAD/DEAH box helicase domain protein;
           n=5; Cystobacterineae|Rep: DEAD/DEAH box helicase domain
           protein - Anaeromyxobacter sp. Fw109-5
          Length = 455

 Score =  159 bits (387), Expect = 1e-37
 Identities = 91/209 (43%), Positives = 125/209 (59%)
 Frame = +3

Query: 114 GKNLVGVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVASEF 293
           GK+++G A TG+GKT A++LP I  +  +P  R      ALVLAPTRELA QI +    F
Sbjct: 41  GKDVIGTAATGTGKTAAFLLPLIDRLAGKPGTR------ALVLAPTRELALQIGEELERF 94

Query: 294 GNSSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEA 473
           G++  VR   + GG    +QA  L +  EIVIATPGRL+D LE+G   L     LVLDEA
Sbjct: 95  GHARRVRGAVIIGGVGMAQQAEALRQKREIVIATPGRLVDHLEQGNARLDGIEALVLDEA 154

Query: 474 DRMLDMGFEPQIRKIIDQIRPDRQTLMWSATWPKEVRKLAEDYLXDYVQINIGSLQLSAN 653
           DRMLDMGF+PQ+ +I+ ++   RQTL++SAT   EV   A  +L D V++ +     +A 
Sbjct: 155 DRMLDMGFKPQLDRILRRLPKQRQTLLFSATMAGEVADFARAHLRDPVRVEVARSGTTAA 214

Query: 654 HNILQIVDVCQEHEKENKLNVLLQEIGQN 740
               Q+  +  +HEK   L  LL+  G +
Sbjct: 215 RAEQQVF-LADQHEKLPLLLTLLERDGDS 242


>UniRef50_Q9N5K1 Cluster: Putative uncharacterized protein; n=2;
           Caenorhabditis|Rep: Putative uncharacterized protein -
           Caenorhabditis elegans
          Length = 630

 Score =  159 bits (387), Expect = 1e-37
 Identities = 88/213 (41%), Positives = 132/213 (61%), Gaps = 9/213 (4%)
 Frame = +3

Query: 114 GKNLVGVAQTGSGKTLAYILPAIVHINNQP---PIRRGDGPIALVLAPTRELAQQIQQVA 284
           G++++G+A TGSGKT+ ++LP ++    Q    P  R +GP  L++ P+RELA+QI  + 
Sbjct: 227 GRDMIGIASTGSGKTMTFVLPLVMFCLEQEMKLPFMRSEGPFGLIIVPSRELARQIFDLI 286

Query: 285 SEF----GNSSY--VRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQR 446
            E     G +    +R     GG P  EQA+D+  G+ IV+ATPGRL D L K   NL+ 
Sbjct: 287 IEMFDALGKAGLPEMRAGLCIGGVPIGEQAKDVRDGIHIVVATPGRLSDMLTKKIINLEV 346

Query: 447 CTYLVLDEADRMLDMGFEPQIRKIIDQIRPDRQTLMWSATWPKEVRKLAEDYLXDYVQIN 626
           C YLVLDEADRMLDMGFE +I+ I    +  RQTL++SAT P++++  A+  L   + +N
Sbjct: 347 CRYLVLDEADRMLDMGFEDEIKSIFYFFKAQRQTLLFSATMPRKIQFFAKSALVKPIVVN 406

Query: 627 IGSLQLSANHNILQIVDVCQEHEKENKLNVLLQ 725
           +G    +A+ N+LQ ++  +    ENKL  +L+
Sbjct: 407 VGRAG-AASLNVLQELEFVR---SENKLVRVLE 435


>UniRef50_A7RGX3 Cluster: Predicted protein; n=3; Eukaryota|Rep:
           Predicted protein - Nematostella vectensis
          Length = 487

 Score =  159 bits (386), Expect = 2e-37
 Identities = 87/215 (40%), Positives = 133/215 (61%), Gaps = 10/215 (4%)
 Frame = +3

Query: 114 GKNLVGVAQTGSGKTLAYILPAIVHINNQP---PIRRGDGPIALVLAPTRELAQQIQQVA 284
           G++++G+A TGSGKTL + LP I+    Q    P +R +GP  +++ P+RELA+Q  +V 
Sbjct: 84  GRDMIGIAFTGSGKTLVFTLPIIMFSLEQEKAMPFQRNEGPYGMIVVPSRELARQTFEVI 143

Query: 285 SEF-------GNSSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQ 443
           + F       G  S   N C+ GG+  +EQ+  ++RGV +V+ATPGRL+D L+K    L 
Sbjct: 144 THFSRALEAHGFPSLRTNLCI-GGSSIKEQSDAMKRGVHMVVATPGRLMDLLDKRIITLD 202

Query: 444 RCTYLVLDEADRMLDMGFEPQIRKIIDQIRPDRQTLMWSATWPKEVRKLAEDYLXDYVQI 623
            C YLVLDEADRM+DMGFE  +R I    +  RQTL++SAT PK+++  A+  L   V +
Sbjct: 203 VCRYLVLDEADRMIDMGFEEDVRTIFSYFKSQRQTLLFSATMPKKIQNFAKSALVKPVTV 262

Query: 624 NIGSLQLSANHNILQIVDVCQEHEKENKLNVLLQE 728
           N+G    +A+ +++Q V+  ++  K   L   LQ+
Sbjct: 263 NVGRAG-AASLDVIQEVEYVKQEAKVVYLLECLQK 296


>UniRef50_P09052 Cluster: ATP-dependent RNA helicase vasa; n=5;
           Eukaryota|Rep: ATP-dependent RNA helicase vasa -
           Drosophila melanogaster (Fruit fly)
          Length = 661

 Score =  159 bits (386), Expect = 2e-37
 Identities = 83/210 (39%), Positives = 132/210 (62%), Gaps = 2/210 (0%)
 Frame = +3

Query: 105 LCQGKNLVGVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVA 284
           +  G++L+  AQTGSGKT A++LP +  +   P       P  ++++PTRELA QI   A
Sbjct: 279 ISSGRDLMACAQTGSGKTAAFLLPILSKLLEDPHELELGRPQVVIVSPTRELAIQIFNEA 338

Query: 285 SEFGNSSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVL 464
            +F   SY++   V+GG   R Q   + RG  +VIATPGRL+DF+++     +   ++VL
Sbjct: 339 RKFAFESYLKIGIVYGGTSFRHQNECITRGCHVVIATPGRLLDFVDRTFITFEDTRFVVL 398

Query: 465 DEADRMLDMGFEPQIRKIIDQI--RPDRQTLMWSATWPKEVRKLAEDYLXDYVQINIGSL 638
           DEADRMLDMGF   +R+I+  +  RP+ QTLM+SAT+P+E++++A ++L +YV + IG +
Sbjct: 399 DEADRMLDMGFSEDMRRIMTHVTMRPEHQTLMFSATFPEEIQRMAGEFLKNYVFVAIGIV 458

Query: 639 QLSANHNILQIVDVCQEHEKENKLNVLLQE 728
              A  ++ Q +    ++ K +KL  +L E
Sbjct: 459 G-GACSDVKQTIYEVNKYAKRSKLIEILSE 487


>UniRef50_Q7S5R1 Cluster: ATP-dependent RNA helicase dbp-3; n=10;
            Pezizomycotina|Rep: ATP-dependent RNA helicase dbp-3 -
            Neurospora crassa
          Length = 614

 Score =  159 bits (385), Expect = 2e-37
 Identities = 101/294 (34%), Positives = 157/294 (53%), Gaps = 22/294 (7%)
 Frame = +3

Query: 114  GKNLVGVAQTGSGKTLAYILPAIVHINNQPPIR-----RGDGPIALVLAPTRELAQQIQQ 278
            G++++G+A+TGSGKT+A+ LP +  + ++P  +     R   P A++++PTRELA Q   
Sbjct: 216  GRDVIGIAETGSGKTMAFSLPCVESLASRPKPKFNSRDRTAHPRAVIVSPTRELAMQTHA 275

Query: 279  VASEFGNSSYVRNTCVFGGAPKREQARDLER--GVEIVIATPGRLIDFLEKGTTNLQRCT 452
              S   +   +   C+FGG+ K EQ   L +  GV+I+ ATPGRL DFL +G+ +L   +
Sbjct: 276  ALSGLASLVGLSAVCIFGGSDKNEQRNLLYKNNGVDIITATPGRLKDFLSEGSISLANVS 335

Query: 453  YLVLDEADRMLDMGFEPQIRKIIDQIRP--DRQTLMWSATWPKEVRKLAEDYLXDYVQIN 626
            + VLDEADRMLD GF   I+ I+    P   RQTLM++ATWP +++KLAE Y+ +  Q+ 
Sbjct: 336  FAVLDEADRMLDRGFSEDIKLILSGCPPKEQRQTLMFTATWPLDIQKLAESYMINPAQVT 395

Query: 627  I-------------GSLQLSANHNILQIVDVCQEHEKENKLNVLLQEIGQNQDPGARPLY 767
            I             G+++L AN  I Q V+V     KE +L  LL+E  +      R L 
Sbjct: 396  IGHRTRAGGDGEGNGNIELQANSRIEQKVEVVDPRGKEFRLYELLKEAQKGSQKDDRILV 455

Query: 768  LLKLKEKRXTXPEISDDMDGQLCACTXTNTARKG*SXXPILKRVVSSILVATDV 929
                K++     +       ++ +        +        K   +++LVATDV
Sbjct: 456  FCLYKKEAVRVEQFLSRKGIKVASIHGDLRQDQRTRSLEAFKSGTTTVLVATDV 509


>UniRef50_A5K071 Cluster: ATP-dependent RNA helicase, putative; n=6;
           Plasmodium|Rep: ATP-dependent RNA helicase, putative -
           Plasmodium vivax
          Length = 717

 Score =  158 bits (384), Expect = 3e-37
 Identities = 75/160 (46%), Positives = 108/160 (67%), Gaps = 1/160 (0%)
 Frame = +3

Query: 234 LVLAPTRELAQQIQQVASEFGNSSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLID 413
           L+L PTREL  Q+      F    ++R+  V+GG PK  Q  +L++G +IV+ATPGRL+D
Sbjct: 405 LILLPTRELCMQVVDEIKAFEKELHIRSVAVYGGVPKYTQISNLKKGADIVVATPGRLLD 464

Query: 414 FLEKGTTNLQRCTYLVLDEADRMLDMGFEPQIRKIIDQIRPDRQTLMWSATWPKEVRKLA 593
            LE G  +L RC Y+V+DEADR+LDMGFE Q++KI+ Q+  ++Q L ++ATWP++VRKLA
Sbjct: 465 LLESGVIHLLRCIYVVIDEADRLLDMGFEKQLKKIMTQVNRNKQLLFFTATWPEQVRKLA 524

Query: 594 EDY-LXDYVQINIGSLQLSANHNILQIVDVCQEHEKENKL 710
             +   D V+I IG  +L+AN NI Q V +    + + KL
Sbjct: 525 YQFSSFDPVKIQIGKSELTANKNIQQSVVISSSIDLKKKL 564



 Score = 48.8 bits (111), Expect = 4e-04
 Identities = 39/101 (38%), Positives = 49/101 (48%), Gaps = 4/101 (3%)
 Frame = +3

Query: 114 GKNLVGVAQTGSGKTLAYILPAIVHINNQPPIRRGDG-PIALVLAPTRELAQQIQQVASE 290
           GK+L+GVA+TGSGKTLA+ LPA++HI  Q    R  G    L  A    L Q  + +  E
Sbjct: 314 GKDLIGVAETGSGKTLAFALPALMHILKQREGERKSGRESGLENAREHRLEQNQEDMGEE 373

Query: 291 FGNSSYVRNTCVFGGAPKREQARD---LERGVEIVIATPGR 404
               S   N     GA +R    D    ER V  +I  P R
Sbjct: 374 ---PSQEWNNEPTQGATQRSSGNDTHEAERTVYGLILLPTR 411


>UniRef50_Q9V3C0 Cluster: ATP-dependent RNA helicase abstrakt; n=7;
           Eukaryota|Rep: ATP-dependent RNA helicase abstrakt -
           Drosophila melanogaster (Fruit fly)
          Length = 619

 Score =  158 bits (383), Expect = 4e-37
 Identities = 82/204 (40%), Positives = 119/204 (58%), Gaps = 9/204 (4%)
 Frame = +3

Query: 114 GKNLVGVAQTGSGKTLAYILPAIVHINNQP---PIRRGDGPIALVLAPTRELAQQIQQVA 284
           G++L+G+A TGSGKTL ++LP I+    Q    P  R +GP  L++ P+RELA+Q  ++ 
Sbjct: 214 GRDLIGIAFTGSGKTLVFVLPVIMFALEQEYSLPFERNEGPYGLIICPSRELAKQTHEII 273

Query: 285 SEFGNSSY------VRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQR 446
             +           +R+    GG P  E    + RGV IV+ATPGRL+D L+K    L  
Sbjct: 274 QHYSKHLQACGMPEIRSCLAMGGLPVSEALDVISRGVHIVVATPGRLMDMLDKKILTLDM 333

Query: 447 CTYLVLDEADRMLDMGFEPQIRKIIDQIRPDRQTLMWSATWPKEVRKLAEDYLXDYVQIN 626
           C YL +DEADRM+DMGFE  +R I    +  RQTL++SAT PK+++  A   L   V IN
Sbjct: 334 CRYLCMDEADRMIDMGFEEDVRTIFSFFKGQRQTLLFSATMPKKIQNFARSALVKPVTIN 393

Query: 627 IGSLQLSANHNILQIVDVCQEHEK 698
           +G    +A+ N+ Q V+  ++  K
Sbjct: 394 VGRAG-AASMNVTQQVEYVKQEAK 416


>UniRef50_A5BHG9 Cluster: Putative uncharacterized protein; n=1;
           Vitis vinifera|Rep: Putative uncharacterized protein -
           Vitis vinifera (Grape)
          Length = 757

 Score =  157 bits (382), Expect = 5e-37
 Identities = 85/177 (48%), Positives = 119/177 (67%), Gaps = 7/177 (3%)
 Frame = +3

Query: 114 GKNLVGVAQTGSGKTLAYILPAIVHINNQPPIRRGDG---PIALVLAPTRELAQQIQQVA 284
           G++L+  AQTGSGKT A+  P I  I      R G     P AL+L+PTREL+ QI + A
Sbjct: 157 GRDLMACAQTGSGKTAAFCFPIICGILRNQLSRGGARLACPTALILSPTRELSCQIHEEA 216

Query: 285 SEFGNSSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVL 464
            +F   + ++    +GGAP  +Q R+LERGV+I++ATPGRL+D +E+   +L+   YL L
Sbjct: 217 KKFSYKTGLKVVVAYGGAPISQQFRNLERGVDILVATPGRLVDMIERARVSLRMIKYLAL 276

Query: 465 DEADRMLDMGFEPQIRKIIDQI-RPD---RQTLMWSATWPKEVRKLAEDYLXDYVQI 623
           DEADRMLDMGFEPQIRKI++Q+  P    RQT+++SAT+P E++ L  D+L  Y  +
Sbjct: 277 DEADRMLDMGFEPQIRKIVEQMDMPPPGARQTMLFSATFPNEIQIL--DHLEFYAAV 331


>UniRef50_A3ZXX1 Cluster: ATP-dependent RNA helicase; n=2;
           Planctomycetaceae|Rep: ATP-dependent RNA helicase -
           Blastopirellula marina DSM 3645
          Length = 447

 Score =  157 bits (381), Expect = 7e-37
 Identities = 103/298 (34%), Positives = 152/298 (51%)
 Frame = +3

Query: 105 LCQGKNLVGVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVA 284
           L +G +L+G AQTG+GKT A+ LP +  ++          P  LVL+PTRELA QI Q  
Sbjct: 30  LLEGSDLIGCAQTGTGKTAAFALPILNQLDLDRSRADACAPQVLVLSPTRELAVQIAQSF 89

Query: 285 SEFGNSSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVL 464
           + +G +   R T +FGG  +  Q R L+RGV + IATPGRL+D +++G  +L +    VL
Sbjct: 90  NVYGRNVKFRLTTIFGGVGQNPQVRALKRGVHVAIATPGRLLDLMDQGYVDLSQAKTFVL 149

Query: 465 DEADRMLDMGFEPQIRKIIDQIRPDRQTLMWSATWPKEVRKLAEDYLXDYVQINIGSLQL 644
           DEADRMLDMGF P ++ I+ ++   RQT+ ++AT P +V +LA   L + V+I +     
Sbjct: 150 DEADRMLDMGFMPALKTIVSKLPKQRQTIFFTATMPPKVAQLASGLLNNPVRIEVAPEST 209

Query: 645 SANHNILQIVDVCQEHEKENKLNVLLQEIGQNQDPGARPLYLLKLKEKRXTXPEISDDMD 824
           +A     +++ V Q  ++      LL+   Q +  G R L   K K       +  +   
Sbjct: 210 TAERVEQRLMYVSQGDKR-----ALLEHSLQAEGVG-RTLVFTKTKHGADRLAKELNASG 263

Query: 825 GQLCACTXTNTARKG*SXXPILKRVVSSILVATDVGCXRS*CGMGSNFXINFDXPXXP 998
            +  A     T  K        +     +LVATDV   R     G    +NFD P  P
Sbjct: 264 IRTDAIHGNKTQNKRNRALESFRSGRLQVLVATDVAA-RGIDVDGVTHVVNFDLPIDP 320


>UniRef50_A7SE71 Cluster: Predicted protein; n=1; Nematostella
           vectensis|Rep: Predicted protein - Nematostella
           vectensis
          Length = 411

 Score =  157 bits (381), Expect = 7e-37
 Identities = 85/202 (42%), Positives = 120/202 (59%), Gaps = 3/202 (1%)
 Frame = +3

Query: 114 GKNLVGVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVASEF 293
           G++++G+A+TGSGKTLAY LP  + +  + P   GD P+AL+L PTREL QQ+    SE 
Sbjct: 77  GRDIIGLAETGSGKTLAYSLPLCMLLRTKAPSNPGDTPVALILTPTRELMQQVFMNVSEM 136

Query: 294 GNSSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEA 473
            +        V GG P   Q   L  G ++V+ATPGRL+D  ++G   L + TYLV+DEA
Sbjct: 137 LDVIRCPGNPVCGGVPVSTQTIALREGADVVVATPGRLLDLCKRGALCLDKITYLVMDEA 196

Query: 474 DRMLDMGFEPQIRKIIDQIRPD---RQTLMWSATWPKEVRKLAEDYLXDYVQINIGSLQL 644
           DRML MG E Q+RKI+         RQTL+WSAT P+ + +LA   + + + I +G   L
Sbjct: 197 DRMLGMGMEEQLRKIVGLATGTSRARQTLLWSATLPESLERLARSAVLNPITIQVGPGGL 256

Query: 645 SANHNILQIVDVCQEHEKENKL 710
            A  ++ Q V     ++K  KL
Sbjct: 257 IA-PSVQQNVVFLYHYQKPQKL 277


>UniRef50_Q9LU46 Cluster: DEAD-box ATP-dependent RNA helicase 35;
           n=2; Magnoliophyta|Rep: DEAD-box ATP-dependent RNA
           helicase 35 - Arabidopsis thaliana (Mouse-ear cress)
          Length = 591

 Score =  157 bits (381), Expect = 7e-37
 Identities = 83/204 (40%), Positives = 126/204 (61%), Gaps = 9/204 (4%)
 Frame = +3

Query: 114 GKNLVGVAQTGSGKTLAYILPAIVHINNQP---PIRRGDGPIALVLAPTRELAQQIQQVA 284
           G++++G+A TGSGKTL ++LP I+    +    PI  G+GPI L++ P+RELA+Q  +V 
Sbjct: 183 GRDMIGIAFTGSGKTLVFVLPMIMIALQEEMMMPIAAGEGPIGLIVCPSRELARQTYEVV 242

Query: 285 SEFG----NSSY--VRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQR 446
            +F      + Y  +R+    GG   R Q   ++RGV IV+ATPGRL D L K   +L  
Sbjct: 243 EQFVAPLVEAGYPPLRSLLCIGGIDMRSQLEVVKRGVHIVVATPGRLKDMLAKKKMSLDA 302

Query: 447 CTYLVLDEADRMLDMGFEPQIRKIIDQIRPDRQTLMWSATWPKEVRKLAEDYLXDYVQIN 626
           C YL LDEADR++D+GFE  IR++ D  +  RQTL++SAT P +++  A   L   V +N
Sbjct: 303 CRYLTLDEADRLVDLGFEDDIREVFDHFKSQRQTLLFSATMPTKIQIFARSALVKPVTVN 362

Query: 627 IGSLQLSANHNILQIVDVCQEHEK 698
           +G    +AN +++Q V+  ++  K
Sbjct: 363 VGRAG-AANLDVIQEVEYVKQEAK 385


>UniRef50_Q9GNP1 Cluster: Vasa homolog; n=18; Eumetazoa|Rep: Vasa
            homolog - Ciona savignyi (Pacific transparent sea squirt)
          Length = 770

 Score =  157 bits (380), Expect = 9e-37
 Identities = 87/218 (39%), Positives = 129/218 (59%), Gaps = 9/218 (4%)
 Frame = +3

Query: 117  KNLVGVAQTGSGKTLAYILPAIVH-INN---QPPIRRGDGPIALVLAPTRELAQQIQQVA 284
            ++L+  AQTGSGKT A++LP +   I N            P A+V+ PTREL  QI   A
Sbjct: 351  RDLMACAQTGSGKTAAFLLPVLTKLITNGLQSSQFSEKQTPRAIVVGPTRELIYQIFLEA 410

Query: 285  SEFGNSSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVL 464
             +F   + VR    +GG     Q RDL+RG  I+IATPGRL+DF+ +G   L    +++L
Sbjct: 411  RKFSRGTVVRPVVAYGGTSMNHQIRDLQRGCHILIATPGRLMDFINRGLVGLDHVEFVIL 470

Query: 465  DEADRMLDMGFEPQIRKIIDQ----IRPDRQTLMWSATWPKEVRKLAEDYL-XDYVQINI 629
            DEADRMLDMGFE +IRK+        + DR TLM+SAT+P E+++LA D+L  D++ + +
Sbjct: 471  DEADRMLDMGFETEIRKLASSPGMPSKSDRHTLMFSATFPDEIQRLAHDFLREDFLFLTV 530

Query: 630  GSLQLSANHNILQIVDVCQEHEKENKLNVLLQEIGQNQ 743
            G +  +       I+ V Q+ +K  KL  L+ ++ + +
Sbjct: 531  GRVGGACTDVTQSIIQVDQD-DKRAKLLELISDVAETR 567


>UniRef50_Q4JG17 Cluster: Vasa-like protein; n=1; Litopenaeus
           vannamei|Rep: Vasa-like protein - Penaeus vannamei
           (Penoeid shrimp) (European white shrimp)
          Length = 703

 Score =  157 bits (380), Expect = 9e-37
 Identities = 91/218 (41%), Positives = 136/218 (62%), Gaps = 8/218 (3%)
 Frame = +3

Query: 102 SLCQGKNLVGVAQTGSGKTLAYILPAIVHI--NNQPP--IRRGDGPIALVLAPTRELAQQ 269
           ++  G++++  AQTGSGKT A++LP + +I  NN P         P  LV+ PTRELA Q
Sbjct: 294 NVMNGRDIMACAQTGSGKTAAFLLPMLHYILDNNCPSNAFEEPAQPTGLVICPTRELAIQ 353

Query: 270 IQQVASEFGNSSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRC 449
           I + A +F +SS  +    +GGA    Q + +  G  I++ATPGRL+DFLEKG       
Sbjct: 354 IMREARKFSHSSVAKCCVAYGGAAGFHQLKTIHSGCHILVATPGRLLDFLEKGKIVFSSL 413

Query: 450 TYLVLDEADRMLDMGFEPQIRKIIDQ--IRP--DRQTLMWSATWPKEVRKLAEDYLXDYV 617
            YLVLDEADRMLDMGF   I+ +I+   + P  +R TLM+SAT+P E+++LA  +L +Y+
Sbjct: 414 KYLVLDEADRMLDMGFLSSIKTVINHKTMTPTAERITLMFSATFPHEIQELASAFLNNYL 473

Query: 618 QINIGSLQLSANHNILQIVDVCQEHEKENKLNVLLQEI 731
            + +G++  +AN ++ Q V    + EK+ KL  + +EI
Sbjct: 474 FVVVGTVG-AANTDVKQEVLCVPKFEKKAKLVEMCEEI 510


>UniRef50_Q9GV13 Cluster: Vasa-related protein CnVAS1; n=3;
            Eumetazoa|Rep: Vasa-related protein CnVAS1 - Hydra
            magnipapillata (Hydra)
          Length = 797

 Score =  156 bits (379), Expect = 1e-36
 Identities = 84/219 (38%), Positives = 134/219 (61%), Gaps = 9/219 (4%)
 Frame = +3

Query: 117  KNLVGVAQTGSGKTLAYILPAI---VHINNQ--PPIRRGDGPIALVLAPTRELAQQIQQV 281
            ++L+  AQTGSGKT A+++P +   +   ++    +     P+ALV+APTRELA QIQ+ 
Sbjct: 391  RDLMSCAQTGSGKTAAFLIPVLNTLMQFRSELTSSLSEVQAPLALVIAPTRELAVQIQKE 450

Query: 282  ASEFGNSSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLV 461
            A +F  ++ ++   ++GG       R +++   +++ TPGRL DFL K   +L    YL+
Sbjct: 451  ARKFAQNTSIKPVVIYGGVQVAYHLRQVQQDCHLLVGTPGRLKDFLGKRKISLANLKYLI 510

Query: 462  LDEADRMLDMGFEPQIRKIIDQI----RPDRQTLMWSATWPKEVRKLAEDYLXDYVQINI 629
            LDEADRMLDMGF P+I+ II+      + DR TLM+SAT+P E++ LA ++L +YV + I
Sbjct: 511  LDEADRMLDMGFLPEIKAIINDFDMPPKEDRHTLMFSATFPTEIQNLAAEFLNNYVYLTI 570

Query: 630  GSLQLSANHNILQIVDVCQEHEKENKLNVLLQEIGQNQD 746
            G +    + +I Q +   +E  K +KL  +L   G N++
Sbjct: 571  GKVG-GTHSDITQCIMEVEESAKRDKLIEILDTEGTNRN 608


>UniRef50_Q0E3X4 Cluster: DEAD-box ATP-dependent RNA helicase 35A;
           n=50; Eukaryota|Rep: DEAD-box ATP-dependent RNA helicase
           35A - Oryza sativa subsp. japonica (Rice)
          Length = 627

 Score =  156 bits (379), Expect = 1e-36
 Identities = 88/221 (39%), Positives = 131/221 (59%), Gaps = 9/221 (4%)
 Frame = +3

Query: 114 GKNLVGVAQTGSGKTLAYILPAIVHINNQP---PIRRGDGPIALVLAPTRELAQQIQQVA 284
           G++++G+A TGSGKTL ++LP I+    +    PI  G+GP  +++ P+RELA+Q   V 
Sbjct: 219 GRDMIGIAFTGSGKTLVFVLPLIMVALQEEMMMPIVPGEGPFGMIICPSRELAKQTYDVI 278

Query: 285 SEF----GNSSY--VRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQR 446
            +F      + Y  +R     GG   R Q   +++GV IV+ATPGRL D L K   NL  
Sbjct: 279 EQFLVPLKEAGYPEIRPLLCIGGVDMRAQLDVVKKGVHIVVATPGRLKDLLAKKKMNLDN 338

Query: 447 CTYLVLDEADRMLDMGFEPQIRKIIDQIRPDRQTLMWSATWPKEVRKLAEDYLXDYVQIN 626
           C YL LDEADR++D+GFE  IR++ D  +  RQTL++SAT PK+++  A+  L   V +N
Sbjct: 339 CRYLTLDEADRLVDLGFEDDIREVFDHFKAQRQTLLFSATMPKKIQNFAKSALVKPVIVN 398

Query: 627 IGSLQLSANHNILQIVDVCQEHEKENKLNVLLQEIGQNQDP 749
           +G    +AN +++Q V    E+ KE+   + L E  Q   P
Sbjct: 399 VGRAG-AANLDVIQEV----EYVKEDARIIYLLECLQKTPP 434


>UniRef50_UPI00015B4D1B Cluster: PREDICTED: similar to DEAD box
           ATP-dependent RNA helicase; n=1; Nasonia
           vitripennis|Rep: PREDICTED: similar to DEAD box
           ATP-dependent RNA helicase - Nasonia vitripennis
          Length = 594

 Score =  156 bits (378), Expect = 2e-36
 Identities = 82/208 (39%), Positives = 121/208 (58%), Gaps = 9/208 (4%)
 Frame = +3

Query: 102 SLCQGKNLVGVAQTGSGKTLAYILPAIVHINNQP---PIRRGDGPIALVLAPTRELAQQI 272
           ++  G++++G+A TGSGKTL ++LP I+    Q    P  R +GP  L++ P+RELA+Q 
Sbjct: 212 AVLSGRDIIGIAFTGSGKTLVFVLPLIMFCLEQEVALPFGRNEGPYGLIICPSRELAKQT 271

Query: 273 QQVASEFGNS------SYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTT 434
             +   + NS        +R     GG P  E    + RGV I++ATPGRL+D L+K   
Sbjct: 272 YDIIQHYTNSLRHHHCPEIRCCLAIGGVPVSESLDVISRGVHIMVATPGRLMDMLDKKMV 331

Query: 435 NLQRCTYLVLDEADRMLDMGFEPQIRKIIDQIRPDRQTLMWSATWPKEVRKLAEDYLXDY 614
            L  C YL +DEADRM+DMGFE  +R I       RQTL++SAT PK+++  A   L   
Sbjct: 332 KLGVCRYLCMDEADRMIDMGFEEDVRTIFSFFEGQRQTLLFSATMPKKIQNFARSALVKP 391

Query: 615 VQINIGSLQLSANHNILQIVDVCQEHEK 698
           V IN+G    +A+ N++Q V+  ++  K
Sbjct: 392 VTINVGRAG-AASMNVIQEVEYVKQEAK 418


>UniRef50_A5G1U8 Cluster: DEAD/DEAH box helicase domain protein;
           n=1; Acidiphilium cryptum JF-5|Rep: DEAD/DEAH box
           helicase domain protein - Acidiphilium cryptum (strain
           JF-5)
          Length = 525

 Score =  155 bits (375), Expect = 4e-36
 Identities = 90/211 (42%), Positives = 129/211 (61%), Gaps = 2/211 (0%)
 Frame = +3

Query: 105 LCQGKNLVGVAQTGSGKTLAYILPAIVHI--NNQPPIRRGDGPIALVLAPTRELAQQIQQ 278
           + +G +LVG+AQTG+GKT A++LP +  I  N   P  R     ALVLAPTRELA QI  
Sbjct: 91  MLEGHDLVGIAQTGTGKTAAFVLPILHRIAANRARPAPRACR--ALVLAPTRELATQIAD 148

Query: 279 VASEFGNSSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYL 458
            A  +G  +      V GGA    QAR +E GV++++ATPGRL+D +  G   L     +
Sbjct: 149 AARTYGKFTRPSVAVVIGGAKPGPQARRMESGVDLLVATPGRLLDHVAAGVIRLDAVETV 208

Query: 459 VLDEADRMLDMGFEPQIRKIIDQIRPDRQTLMWSATWPKEVRKLAEDYLXDYVQINIGSL 638
           VLDEAD+MLD+GF P IR+I+ ++   RQ +M+SAT PK +R LA ++L D  ++ + S+
Sbjct: 209 VLDEADQMLDLGFIPAIRQIMAKLPRQRQAVMFSATMPKPIRALAGEFLRDPREVAV-SV 267

Query: 639 QLSANHNILQIVDVCQEHEKENKLNVLLQEI 731
           +      I Q V +    EK++KL  LL ++
Sbjct: 268 ESKPVDRIDQQVLLLAPEEKKDKLAWLLADV 298


>UniRef50_Q62IF8 Cluster: ATP-dependent RNA helicase RhlE; n=59;
           Betaproteobacteria|Rep: ATP-dependent RNA helicase RhlE
           - Burkholderia mallei (Pseudomonas mallei)
          Length = 482

 Score =  154 bits (373), Expect = 7e-36
 Identities = 84/208 (40%), Positives = 129/208 (62%), Gaps = 3/208 (1%)
 Frame = +3

Query: 114 GKNLVGVAQTGSGKTLAYILPAIVHINNQPPIRRGDG--PI-ALVLAPTRELAQQIQQVA 284
           G++++G AQTG+GKT ++ LP I  +  Q          P+ AL+L PTRELA Q+    
Sbjct: 48  GRDVMGAAQTGTGKTASFSLPIIQRLLPQANTSASPARHPVRALILTPTRELADQVAANV 107

Query: 285 SEFGNSSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVL 464
             +   + +R+  VFGG     Q  +L RGVEI+IATPGRL+D +++ T NL +   LVL
Sbjct: 108 HAYAKHTPLRSAVVFGGVDMNPQMAELRRGVEILIATPGRLLDHVQQKTANLGQVQILVL 167

Query: 465 DEADRMLDMGFEPQIRKIIDQIRPDRQTLMWSATWPKEVRKLAEDYLXDYVQINIGSLQL 644
           DEADRMLDMGF P +++I++ +  +RQTL++SAT+  E++KLA  YL +   I +     
Sbjct: 168 DEADRMLDMGFLPDLQRILNLLPKERQTLLFSATFSPEIKKLASTYLRNPQTIEVARSNA 227

Query: 645 SANHNILQIVDVCQEHEKENKLNVLLQE 728
           +A+  + QIV    E +K+  +  L+++
Sbjct: 228 AAS-TVTQIVYDVAEGDKQAAVVKLIRD 254


>UniRef50_Q5NML9 Cluster: DNA and RNA helicase; n=28;
           Alphaproteobacteria|Rep: DNA and RNA helicase -
           Zymomonas mobilis
          Length = 458

 Score =  154 bits (373), Expect = 7e-36
 Identities = 81/207 (39%), Positives = 125/207 (60%)
 Frame = +3

Query: 105 LCQGKNLVGVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVA 284
           L +GK+L G+AQTG+GKT A+ LP+I ++   P  R   G   L+L+PTRELA QI +  
Sbjct: 40  LLEGKDLCGIAQTGTGKTAAFALPSIHYLATNPQARPQRGCRMLILSPTRELASQIARAC 99

Query: 285 SEFGNSSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVL 464
           +++     +    VFGG P   Q R L+RG +I++ATPGRL+D +++    L+     VL
Sbjct: 100 NDYTRHLRMSVNAVFGGVPIGRQMRMLDRGTDILVATPGRLLDLIDQRALVLKDVEVFVL 159

Query: 465 DEADRMLDMGFEPQIRKIIDQIRPDRQTLMWSATWPKEVRKLAEDYLXDYVQINIGSLQL 644
           DEAD+MLD+GF   +R+I   +  +RQTL +SAT PK +++L+  +L D V +++   Q 
Sbjct: 160 DEADQMLDLGFIHALRRIDKLLPKNRQTLFFSATMPKTIQELSSQFLSDPVTVSVAP-QS 218

Query: 645 SANHNILQIVDVCQEHEKENKLNVLLQ 725
           S    + Q      + EK+  L + L+
Sbjct: 219 STAERVEQFGIFVNQSEKQALLTITLK 245


>UniRef50_A7U5X1 Cluster: DEAD-box helicase 11; n=11; Plasmodium|Rep:
            DEAD-box helicase 11 - Plasmodium falciparum
          Length = 941

 Score =  153 bits (370), Expect = 2e-35
 Identities = 123/331 (37%), Positives = 170/331 (51%), Gaps = 41/331 (12%)
 Frame = +3

Query: 120  NLVGVAQTGSGKTLAYILPAIVH-INNQPP---------------IRRGDGPIALVLAPT 251
            +L+GVAQTGSGKT  Y+LP I H + N PP                 R   PI L+LAPT
Sbjct: 401  DLIGVAQTGSGKTAGYLLPIINHMLINDPPKHTYYEQNNKTSNYYFNRVCLPICLILAPT 460

Query: 252  RELAQQIQQVASEFGNSSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGT 431
            RELA QI   A +F   + ++   ++GG   + Q  +L++G +I++ATPGRL D LEKG 
Sbjct: 461  RELAVQIFYDAKKFCFETGIKPVVLYGGNNIKTQLSNLDKGADIIVATPGRLNDILEKGK 520

Query: 432  TNLQRCTYLVLDEADRMLDMGFEPQIRKII-DQIRP-----------------------D 539
              L   T+LVLDEADRMLDMGF PQIR I+ D   P                        
Sbjct: 521  IKLFLTTFLVLDEADRMLDMGFSPQIRSIVNDYDMPGNDNDVHTSENKVEYKKYCNDIIK 580

Query: 540  RQTLMWSATWPKEVRKLAEDYLXDYVQINIGSLQLSANHNILQ-IVDVCQEHEKENKLNV 716
            RQT+M+SAT+ KE++ LA++YL  Y  + +G +  S N  I Q +V V    E+ENK N 
Sbjct: 581  RQTIMFSATFRKEIQVLAKEYLCKYTFLLVGKVG-STNEYIKQNLVFV----EEENKCNY 635

Query: 717  LLQEIGQNQDPGARPLYLLKLKEKRXTXPEISDDMDGQLCACTXTNTARKG*SXXPILKR 896
            LL  + +N + G   L++   ++       +S+     +C     +   +      + KR
Sbjct: 636  LLNLLAENNN-GLTILFVETKRKADIIERFLSNQKLNAVCIHGDKSQDERE-RALKLFKR 693

Query: 897  VVSSILVATDVGCXRS*CGMGSNFXINFDXP 989
             + +ILVATDV   R          INFD P
Sbjct: 694  GIKNILVATDVAA-RGLDISNIKHVINFDLP 723


>UniRef50_UPI00015B61D8 Cluster: PREDICTED: similar to vasa-like
            protein; n=1; Nasonia vitripennis|Rep: PREDICTED: similar
            to vasa-like protein - Nasonia vitripennis
          Length = 732

 Score =  152 bits (369), Expect = 2e-35
 Identities = 89/225 (39%), Positives = 141/225 (62%), Gaps = 13/225 (5%)
 Frame = +3

Query: 105  LCQGKNLVGVAQTGSGKTLAYILPAIVH--------INNQPPIRRGDGPIALVLAPTREL 260
            L  G++L+  AQTGSGKT A+++P I+H        +++     + + P AL+++PTREL
Sbjct: 336  LLSGRDLMACAQTGSGKTAAFLIP-IIHTLLAKDRDLSDMSSANQVE-PRALIISPTREL 393

Query: 261  AQQIQQVASEFGNSSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNL 440
              QI   A +F   S ++   ++GG     Q + + +GV+I++ATPGRL+D + KG    
Sbjct: 394  TIQIFDEARKFSKDSVLKCHIIYGGTSTSHQMKQIFQGVDILVATPGRLLDLVGKGKITF 453

Query: 441  QRCTYLVLDEADRMLDMGFEPQIRKII--DQIRP--DRQTLMWSATWPKEVRKLAEDYLX 608
                ++VLDEADRMLDMGF P + K++  D ++P  +RQTLM+SAT+P+E+++LA  +L 
Sbjct: 454  DAIEFVVLDEADRMLDMGFLPDVEKVLRHDTMKPPGERQTLMFSATFPQEIQQLAAKFLN 513

Query: 609  DYVQINIGSLQLSANHNILQIVDVCQEHEKENKLNVLL-QEIGQN 740
            +YV + +G +  SA  +I Q     ++ +K  KL  LL +EI QN
Sbjct: 514  NYVFVTVGIVG-SACTDIEQSFFEVKKSDKRTKLKELLNEEIEQN 557


>UniRef50_Q82T78 Cluster: RhlE; ATP-dependent RNA helicase RhlE;
           n=3; Nitrosomonadaceae|Rep: RhlE; ATP-dependent RNA
           helicase RhlE - Nitrosomonas europaea
          Length = 498

 Score =  152 bits (369), Expect = 2e-35
 Identities = 80/194 (41%), Positives = 120/194 (61%), Gaps = 3/194 (1%)
 Frame = +3

Query: 102 SLCQGKNLVGVAQTGSGKTLAYILPAIVHINN--QPPIRRGDGPI-ALVLAPTRELAQQI 272
           S+  GK+++  AQTG+GKT  + LP +  +       +     P+ AL++APTRELA QI
Sbjct: 38  SILAGKDVMASAQTGTGKTAGFTLPLLYRLQAYANTSVSPARHPVRALIMAPTRELAMQI 97

Query: 273 QQVASEFGNSSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCT 452
            +   ++G    +R   VFGG     Q   L+ GVEI++ATPGRL+D +E+   N  +  
Sbjct: 98  DESVRKYGKYLALRTAVVFGGINIEPQIAALQAGVEILVATPGRLLDLVEQKAVNFSKTE 157

Query: 453 YLVLDEADRMLDMGFEPQIRKIIDQIRPDRQTLMWSATWPKEVRKLAEDYLXDYVQINIG 632
            LVLDEADRMLDMGF P I++++  + P RQ+LM+SAT+  E+RKLA+  L   V+I   
Sbjct: 158 ILVLDEADRMLDMGFLPDIKRVMALLSPQRQSLMFSATFSGEIRKLADSLLKQPVRIE-A 216

Query: 633 SLQLSANHNILQIV 674
           ++Q + N +I  ++
Sbjct: 217 AVQNTVNESISHVI 230


>UniRef50_Q4W7T8 Cluster: VASA RNA helicase; n=1; Artemia
           franciscana|Rep: VASA RNA helicase - Artemia
           sanfranciscana (Brine shrimp) (Artemia franciscana)
          Length = 726

 Score =  152 bits (369), Expect = 2e-35
 Identities = 77/214 (35%), Positives = 132/214 (61%), Gaps = 8/214 (3%)
 Frame = +3

Query: 117 KNLVGVAQTGSGKTLAYILPAIVHINNQ----PPIRRGDGPIALVLAPTRELAQQIQQVA 284
           ++L+  AQTGSGKT AY++P I  +  +            P A+V+ PTRELA QI + A
Sbjct: 342 RDLMACAQTGSGKTGAYLIPIINRLIEEGCAASSYDETQTPEAVVMCPTRELAIQIFKEA 401

Query: 285 SEFGNSSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVL 464
            +F   + ++   V+GG   R Q+  ++ G  I++ TPGRLIDF+ +G  N   C +LVL
Sbjct: 402 VKFSYDTIIKPVVVYGGVAPRYQSDKVKSGCNILVGTPGRLIDFMNRGVFNFSACKFLVL 461

Query: 465 DEADRMLDMGFEPQIRKIIDQ----IRPDRQTLMWSATWPKEVRKLAEDYLXDYVQINIG 632
           DEADRMLDMGF  +++K++      ++ +R TLM+SAT+P EV++LA ++L +Y+ + +G
Sbjct: 462 DEADRMLDMGFMGEVKKVVYHGTMPVKVERNTLMFSATFPNEVQELAAEFLENYIFVTVG 521

Query: 633 SLQLSANHNILQIVDVCQEHEKENKLNVLLQEIG 734
           ++  +    + +++++  +   +  L +L ++ G
Sbjct: 522 TVGGACMDVLQEVIEIDAKSRIDRLLEILTEKEG 555


>UniRef50_Q6CCZ1 Cluster: Pre-mRNA-processing ATP-dependent RNA
            helicase PRP5; n=1; Yarrowia lipolytica|Rep:
            Pre-mRNA-processing ATP-dependent RNA helicase PRP5 -
            Yarrowia lipolytica (Candida lipolytica)
          Length = 974

 Score =  152 bits (369), Expect = 2e-35
 Identities = 83/229 (36%), Positives = 136/229 (59%), Gaps = 17/229 (7%)
 Frame = +3

Query: 102  SLCQGKNLVGVAQTGSGKTLAYILPAIVHINNQPPIRR--------GDGPIALVLAPTRE 257
            ++  G++++ VA+TGSGKTLA++LP + HI ++  +             P+ +++ PTRE
Sbjct: 411  AVMSGRDVISVAKTGSGKTLAFLLPMLRHIKHRVGVETHTTTLSGASSHPLGVIITPTRE 470

Query: 258  LAQQIQQVASEFGNSSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKG--- 428
            L  QI +    F  +  +   C +GG+P ++Q   L++G  I++ TPGR+ID L      
Sbjct: 471  LCVQIYRDLRPFLAALELTAVCAYGGSPIKDQIAALKKGTHIIVCTPGRMIDLLAANQGR 530

Query: 429  TTNLQRCTYLVLDEADRMLDMGFEPQIRKIIDQIRPDRQTLMWSATWPKEVRKLAEDYLX 608
              +L R T+LV+DEADRM DMGFEPQ+ K+   IRPDRQT+++SAT+PK++ +LA   L 
Sbjct: 531  VLSLSRVTFLVIDEADRMFDMGFEPQVLKLTQSIRPDRQTVLFSATFPKKMEQLARRVLS 590

Query: 609  DYVQINIGSLQLSAN------HNILQIVDVCQEHEKENKLNVLLQEIGQ 737
                 ++G +++           I Q V+V Q   +++K   LL+ +G+
Sbjct: 591  KRSSDSLGPIEIIVGARSVVASEITQFVEVFQ--NEKSKFPRLLEVLGK 637


>UniRef50_Q5NN72 Cluster: DNA and RNA helicase; n=3;
           Sphingomonadales|Rep: DNA and RNA helicase - Zymomonas
           mobilis
          Length = 492

 Score =  152 bits (368), Expect = 3e-35
 Identities = 86/210 (40%), Positives = 129/210 (61%), Gaps = 1/210 (0%)
 Frame = +3

Query: 102 SLCQGKNLVGVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQV 281
           S+   ++L+ VAQTG+GKT +++LP I  + +     R   P +L+L PTRELA Q+ + 
Sbjct: 34  SVLMMRDLIAVAQTGTGKTASFVLPMIDILAHGRC--RARMPRSLILEPTRELAAQVAEN 91

Query: 282 ASEFGNSSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLV 461
             ++G    +  + + GG P  EQ   LE+GV+++IATPGRL+D  E+G   L  C  LV
Sbjct: 92  FEKYGKYHKLSMSLLIGGVPMAEQQAALEKGVDVLIATPGRLLDLFERGKILLSSCEMLV 151

Query: 462 LDEADRMLDMGFEPQIRKIIDQIRPDRQTLMWSATWPKEVRKLAEDYLXDYVQINIGSLQ 641
           +DEADRMLDMGF P I  I  ++   RQTL++SAT P  ++KLA+ +L +  QI I S  
Sbjct: 152 IDEADRMLDMGFIPDIETICTKLPTSRQTLLFSATMPPAIKKLADRFLSNPKQIEI-SRP 210

Query: 642 LSANHNILQ-IVDVCQEHEKENKLNVLLQE 728
            +AN  I Q +++V    +K+   ++L  E
Sbjct: 211 ATANTLIDQRLIEVSPRSKKKKLCDMLRAE 240


>UniRef50_Q8I0W7 Cluster: Snrnp protein, putative; n=6;
            Plasmodium|Rep: Snrnp protein, putative - Plasmodium
            falciparum (isolate 3D7)
          Length = 1123

 Score =  152 bits (368), Expect = 3e-35
 Identities = 114/318 (35%), Positives = 156/318 (49%), Gaps = 27/318 (8%)
 Frame = +3

Query: 117  KNLVGVAQTGSGKTLAYILPAIVHINNQPPIR---RGDGPIALVLAPTRELAQQIQQVAS 287
            ++L+G+A+TGSGKT A++LP + ++   PP+      DGP ALV+AP+RELA QI +  +
Sbjct: 736  RDLIGIAETGSGKTAAFVLPMLSYVKQLPPLTYETSQDGPYALVIAPSRELAIQIYEETN 795

Query: 288  EFGNSSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLD 467
            +F +    R   V GG     QA +L RGVEIVI TPGRL D LEK  T L +C Y++LD
Sbjct: 796  KFASYCSCRTVAVVGGRNAEAQAFELRRGVEIVIGTPGRLQDCLEKAYTVLNQCNYVILD 855

Query: 468  EADRMLDMGFEPQIRKIIDQI------------------------RPDRQTLMWSATWPK 575
            EADRM+DMGFE  +  I+D+I                        R  R T M+SAT P 
Sbjct: 856  EADRMMDMGFEDTVHYILDKIPTSNLKSEDDALALQEEMMTKAGHRLYRLTQMFSATMPP 915

Query: 576  EVRKLAEDYLXDYVQINIGSLQLSANHNILQIVDVCQEHEKENKLNVLLQEIGQNQDPGA 755
             V +L+  YL     I+IG    +   +I Q ++   E +K+ K    LQEI +  +P  
Sbjct: 916  SVERLSRKYLRAPAYISIGD-PGAGKRSIEQKLEFLTEGKKKQK----LQEILEMYEPPI 970

Query: 756  RPLYLLKLKEKRXTXPEISDDMDGQLCACTXTNTARKG*SXXPILKRVVSSILVATDVGC 935
              +  +  K+      +    M  +  A                 K     ILVATDV  
Sbjct: 971  --IVFVNQKKVADIISKSITKMKYKAVALHGGKAQEIREQTLSAFKNAEFDILVATDV-A 1027

Query: 936  XRS*CGMGSNFXINFDXP 989
             R     G    INFD P
Sbjct: 1028 GRGIDVHGVKLVINFDMP 1045


>UniRef50_Q013X8 Cluster: DEAD/DEAH box RNA helicase; n=1;
           Ostreococcus tauri|Rep: DEAD/DEAH box RNA helicase -
           Ostreococcus tauri
          Length = 507

 Score =  151 bits (366), Expect = 5e-35
 Identities = 75/132 (56%), Positives = 95/132 (71%), Gaps = 2/132 (1%)
 Frame = +3

Query: 105 LCQGKNLVGVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVA 284
           +C G++ +G+A TGSGKTLA++LPA   I+ Q P+R+ +GP+ALVLAPTRELA QI   A
Sbjct: 137 ICGGRDALGLATTGSGKTLAFLLPAYAQISRQRPLRKKEGPMALVLAPTRELATQIANEA 196

Query: 285 SEFGNSSYVRNTC-VFGGAPKREQARDLERGVEIVIATPGRLIDFLE-KGTTNLQRCTYL 458
           + F  +      C +FGGA K EQ + L  G EIV+ATPGRLID L  K + +L+R TYL
Sbjct: 197 NAFNRAGVPARCCAIFGGASKHEQLKRLRAGAEIVVATPGRLIDVLHVKNSIDLRRVTYL 256

Query: 459 VLDEADRMLDMG 494
            LDEADRMLDMG
Sbjct: 257 ALDEADRMLDMG 268


>UniRef50_Q54Y81 Cluster: Putative RNA helicase; n=2; Dictyostelium
            discoideum|Rep: Putative RNA helicase - Dictyostelium
            discoideum AX4
          Length = 834

 Score =  151 bits (366), Expect = 5e-35
 Identities = 85/229 (37%), Positives = 130/229 (56%), Gaps = 24/229 (10%)
 Frame = +3

Query: 114  GKNLVGVAQTGSGKTLAYILPAIVHINNQPPIRR---GDGPIALVLAPTRELAQQIQQVA 284
            G++++G+A+TGSGKT A+++P +++I+ QP + +    DGP ALV+APTREL QQI++  
Sbjct: 450  GRDILGIAETGSGKTCAFVIPMLIYISKQPRLTKDTEADGPYALVMAPTRELVQQIEKET 509

Query: 285  SEFGNSSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVL 464
              F      R   + GG    +QA  + +G EI+IATPGRL D LEK    L +C Y+VL
Sbjct: 510  RNFAQHFGFRVVSLVGGQSIEDQAYQVSKGCEIIIATPGRLNDCLEKRYLVLNQCNYIVL 569

Query: 465  DEADRMLDMGFEPQIRKIIDQIRPD---------------------RQTLMWSATWPKEV 581
            DEAD M+D+GFEPQ+  ++D +                        R T+++SAT P  V
Sbjct: 570  DEADMMIDLGFEPQVTSVLDAMPSSFLKSEDDEMAEKQESDRSHIYRTTILFSATMPPLV 629

Query: 582  RKLAEDYLXDYVQINIGSLQLSANHNILQIVDVCQEHEKENKLNVLLQE 728
             KL++ YL     I IG      +     ++ V  E++K+  L  L+++
Sbjct: 630  EKLSKKYLRRPCTITIGEAGKVVDRIRQTVIFVKSENDKKEHLTQLIKD 678


>UniRef50_Q5FS73 Cluster: ATP-dependent RNA helicase; n=2;
           Gluconobacter oxydans|Rep: ATP-dependent RNA helicase -
           Gluconobacter oxydans (Gluconobacter suboxydans)
          Length = 432

 Score =  151 bits (365), Expect = 6e-35
 Identities = 84/213 (39%), Positives = 120/213 (56%)
 Frame = +3

Query: 105 LCQGKNLVGVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVA 284
           L +G++L+G+AQTG+GKT ++ LP +  +   P     +G   LVLAPTREL  QI    
Sbjct: 41  LLEGRDLLGLAQTGTGKTASFALPLLHRLAATPRPAPKNGARVLVLAPTRELVSQIADGF 100

Query: 285 SEFGNSSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVL 464
             F     VR T +FGG  +  Q + LE GV+I++A PGRL+D +E+G  +L +   LVL
Sbjct: 101 ESFSRHQPVRVTTIFGGVSQVHQVKALEEGVDIIVAAPGRLLDLIEQGLCDLSQLETLVL 160

Query: 465 DEADRMLDMGFEPQIRKIIDQIRPDRQTLMWSATWPKEVRKLAEDYLXDYVQINIGSLQL 644
           DEAD+MLDMGF   I +I+  +  DR T+++SAT PK +  L E  L +  ++ I     
Sbjct: 161 DEADQMLDMGFAKPIERIVATLPEDRHTVLFSATMPKSIAALVESLLRNPAKVEIAP-PS 219

Query: 645 SANHNILQIVDVCQEHEKENKLNVLLQEIGQNQ 743
           S    I Q V      +K+  L   L+  G  Q
Sbjct: 220 STVDRIAQSVMFLNASDKKAALLAQLRTPGIGQ 252


>UniRef50_Q2BP56 Cluster: Putative ATP-dependent RNA helicase; n=1;
           Neptuniibacter caesariensis|Rep: Putative ATP-dependent
           RNA helicase - Neptuniibacter caesariensis
          Length = 427

 Score =  150 bits (364), Expect = 8e-35
 Identities = 87/207 (42%), Positives = 125/207 (60%), Gaps = 1/207 (0%)
 Frame = +3

Query: 111 QGKNLVGVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPI-ALVLAPTRELAQQIQQVAS 287
           +G +L+  AQTG+GKT ++ LP I  ++  P    G  P+ ALVLAPTRELA Q+     
Sbjct: 40  RGDDLLAEAQTGTGKTASFALPIIEKLSKNPI--DGYRPVRALVLAPTRELAIQVADNTL 97

Query: 288 EFGNSSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLD 467
           E+G    +R   V+GG P   Q + L+RG +I++ATPGRL+D L +   +L++  YLVLD
Sbjct: 98  EYGRDLGMRVISVYGGVPVENQIKRLKRGTDILVATPGRLLDLLRQKAISLEKLEYLVLD 157

Query: 468 EADRMLDMGFEPQIRKIIDQIRPDRQTLMWSATWPKEVRKLAEDYLXDYVQINIGSLQLS 647
           EADRMLD+GF   I+KI+D    DRQTL+++AT  + V  LAE YL +  +I +     +
Sbjct: 158 EADRMLDLGFIDPIQKIMDYAADDRQTLLFTATADESVEVLAEFYLNNPTKIKVTPRNST 217

Query: 648 ANHNILQIVDVCQEHEKENKLNVLLQE 728
           A   I Q        +K + L+ L+ E
Sbjct: 218 AK-QIRQFAYQVDYGQKADILSYLITE 243


>UniRef50_Q0M1B5 Cluster: Helicase-like:DEAD/DEAH box helicase-like;
           n=11; Alphaproteobacteria|Rep: Helicase-like:DEAD/DEAH
           box helicase-like - Caulobacter sp. K31
          Length = 678

 Score =  150 bits (364), Expect = 8e-35
 Identities = 79/187 (42%), Positives = 116/187 (62%)
 Frame = +3

Query: 114 GKNLVGVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVASEF 293
           G++++G+AQTG+GKT A+ LP I  + N     R   P ALV+APTRELA Q+     ++
Sbjct: 39  GQDVLGIAQTGTGKTAAFTLPLIDKLMNGRAKARM--PRALVIAPTRELADQVASSFEKY 96

Query: 294 GNSSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEA 473
              + +    + GG    +Q + L+RGV+++IATPGRL+D  E+G   +    +LV+DEA
Sbjct: 97  AKGTKLSWALLIGGVSFGDQEKKLDRGVDVLIATPGRLLDHFERGKLLMTGVQFLVVDEA 156

Query: 474 DRMLDMGFEPQIRKIIDQIRPDRQTLMWSATWPKEVRKLAEDYLXDYVQINIGSLQLSAN 653
           DRMLDMGF P I +I     P +QTL +SAT P E+ +L + +L D V+I   S   + N
Sbjct: 157 DRMLDMGFIPDIERIFKMTPPKKQTLFFSATMPPEITRLTKQFLKDPVRIE-ASRPATTN 215

Query: 654 HNILQIV 674
            NI Q++
Sbjct: 216 ENITQLM 222


>UniRef50_A6CFZ8 Cluster: ATP-dependent RNA helicase; n=1;
           Planctomyces maris DSM 8797|Rep: ATP-dependent RNA
           helicase - Planctomyces maris DSM 8797
          Length = 445

 Score =  150 bits (364), Expect = 8e-35
 Identities = 102/296 (34%), Positives = 145/296 (48%)
 Frame = +3

Query: 111 QGKNLVGVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVASE 290
           +G++++G AQTG+GKT A  LP +  +           P+ALVLAPTRELA QI      
Sbjct: 38  EGRDVLGCAQTGTGKTAALALPILNQLGKNSRKSIPHHPLALVLAPTRELAIQIGDSFDA 97

Query: 291 FGNSSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDE 470
           +G    +R+  ++GG  +  Q + L+RG  I++ATPGRL+D + +G   L +    VLDE
Sbjct: 98  YGRHLKLRSVLIYGGVGQGNQVKALKRGAHILVATPGRLLDLMNQGHIKLNQLEVFVLDE 157

Query: 471 ADRMLDMGFEPQIRKIIDQIRPDRQTLMWSATWPKEVRKLAEDYLXDYVQINIGSLQLSA 650
           ADRMLDMGF P +++II Q+   RQ+L +SAT   ++ +LA   L   V +N+     S 
Sbjct: 158 ADRMLDMGFLPDLKRIITQLPTQRQSLFFSATLAPKITELAHSLLSKPVTVNVTPKTTSV 217

Query: 651 NHNILQIVDVCQEHEKENKLNVLLQEIGQNQDPGARPLYLLKLKEKRXTXPEISDDMDGQ 830
                Q++ V     + N    LLQ+I    D   R L   K K    T  +       +
Sbjct: 218 EKIQQQLMFV-----ERNFKQPLLQKI-LGGDEVERALVFTKTKRTANTLSQRLVRSGFK 271

Query: 831 LCACTXTNTARKG*SXXPILKRVVSSILVATDVGCXRS*CGMGSNFXINFDXPXXP 998
             A     +           +R    +LVATDV   R     G    INFD P  P
Sbjct: 272 ATAIHGNKSQGARQQALEAFRRKQVQVLVATDVAA-RGIDIDGITHVINFDLPVEP 326


>UniRef50_Q6T442 Cluster: Hel61; n=4; Leishmania|Rep: Hel61 -
           Leishmania major
          Length = 544

 Score =  150 bits (364), Expect = 8e-35
 Identities = 89/223 (39%), Positives = 129/223 (57%), Gaps = 9/223 (4%)
 Frame = +3

Query: 105 LCQGKNLVGVAQTGSGKTLAYILPAIVHINNQPPIRRGDG-PIALVLAPTRELAQQIQQV 281
           L  G +++G+A TGSGKT+A+ +PA+  +   P     DG P  LVLAPTREL QQ  +V
Sbjct: 127 LANGHDVIGLAPTGSGKTVAFAVPALAGLKPNP-----DGTPSVLVLAPTRELVQQTTKV 181

Query: 282 ASEFGNSSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLV 461
               G    VR    +GGAP+  QAR L  G + ++A PGRL DFL+ G  +++  ++LV
Sbjct: 182 FQNLG-CGQVRVCEAYGGAPRDLQARHLRNGCDALVACPGRLKDFLDGGDVSIRNLSFLV 240

Query: 462 LDEADRMLDMGFEPQIRKIIDQI--RPDRQTLMWSATWPKEVRKLAEDYLXD---YVQIN 626
            DEADR+LDMGF+  + +I+  +      QT+MWSATWP+ V+ +A  YL D    ++  
Sbjct: 241 FDEADRLLDMGFQVHLDEIMAYLDSASHPQTMMWSATWPESVQAMARKYLSDDRVLIRAG 300

Query: 627 IGSLQLSANHNILQIVDVCQEH-EKENKLNVLLQE--IGQNQD 746
                L  N  I Q +  C+   E+  KL  L+++  I  N+D
Sbjct: 301 TAGAGLQVNERIKQELIFCRTFTERIEKLGSLVEDGTIDDNKD 343


>UniRef50_Q1DMX8 Cluster: Pre-mRNA-splicing ATP-dependent RNA helicase
            PRP28; n=16; Pezizomycotina|Rep: Pre-mRNA-splicing
            ATP-dependent RNA helicase PRP28 - Coccidioides immitis
          Length = 817

 Score =  150 bits (364), Expect = 8e-35
 Identities = 89/229 (38%), Positives = 129/229 (56%), Gaps = 30/229 (13%)
 Frame = +3

Query: 111  QGKNLVGVAQTGSGKTLAYILPAIVHINNQPPI-----RRGDGPIALVLAPTRELAQQIQ 275
            Q ++L+GVA TGSGKT A++LP +V+I   P +     R+ DGP A++LAPTRELAQQI+
Sbjct: 413  QNRDLIGVAVTGSGKTAAFLLPLLVYIAELPRLDEFEWRKSDGPYAIILAPTRELAQQIE 472

Query: 276  QVASEFGNSSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTY 455
              A +F N        + GG    EQ+  L  G EI+IATPGRL+D +E+    L +C Y
Sbjct: 473  NEARKFCNPLGFNVVSIVGGHSLEEQSFSLRNGAEIIIATPGRLVDCIERRILVLSQCCY 532

Query: 456  LVLDEADRMLDMGFEPQIRKIIDQI-----RPD--------------------RQTLMWS 560
            +++DEADRM+D+GFE  + KI+D +     +PD                    RQT+M++
Sbjct: 533  VIMDEADRMIDLGFEEPVNKILDALPVSNEKPDTEEAEDARAMSQHLGGKDRYRQTMMYT 592

Query: 561  ATWPKEVRKLAEDYLXDYVQINIGSLQLSANHNILQIVDVCQEHEKENK 707
            AT P  V ++A  YL     + IG++   A   + Q V+     +K  K
Sbjct: 593  ATMPSAVERIARKYLRRPAIVTIGNIG-EAVDTVEQRVEFISGEDKRKK 640


>UniRef50_Q4QIG1 Cluster: ATP-dependent DEAD/H RNA helicase,
           putative; n=7; Trypanosomatidae|Rep: ATP-dependent
           DEAD/H RNA helicase, putative - Leishmania major
          Length = 685

 Score =  150 bits (363), Expect = 1e-34
 Identities = 76/188 (40%), Positives = 114/188 (60%), Gaps = 3/188 (1%)
 Frame = +3

Query: 102 SLCQGKNLVGVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQV 281
           +L  G++L+  A+TGSGKTL Y LP I H  +QP   +G+GPI LVL PT+ELA Q+  +
Sbjct: 80  ALMSGRDLLLTAKTGSGKTLCYALPLIRHCADQPRCEKGEGPIGLVLVPTQELAMQVFTL 139

Query: 282 ASEFGNSSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKG---TTNLQRCT 452
             E G ++ +R    +G     +  R  + G E+++ATPGRL+D L      T +L R +
Sbjct: 140 LDELGEAARLRCVASYGSTSLSDNIRHAKVGCELMVATPGRLLDLLTVNGGKTLSLSRVS 199

Query: 453 YLVLDEADRMLDMGFEPQIRKIIDQIRPDRQTLMWSATWPKEVRKLAEDYLXDYVQINIG 632
           ++++DEADR+ D GF   +   +  IRPDR T M SAT PKE+R +   +L + V I++G
Sbjct: 200 FVIVDEADRLFDSGFMEHVEAFLKNIRPDRVTGMISATMPKELRGVVAQHLRNPVVISVG 259

Query: 633 SLQLSANH 656
                A++
Sbjct: 260 GKPTPASN 267


>UniRef50_A2D755 Cluster: DEAD/DEAH box helicase family protein; n=1;
            Trichomonas vaginalis G3|Rep: DEAD/DEAH box helicase
            family protein - Trichomonas vaginalis G3
          Length = 1123

 Score =  150 bits (363), Expect = 1e-34
 Identities = 76/187 (40%), Positives = 120/187 (64%)
 Frame = +3

Query: 114  GKNLVGVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVASEF 293
            G++L+G+A+TGSGKT +YI+PAI H+  Q      +GP  L++APT+ELAQQI+  A++ 
Sbjct: 779  GRDLIGIAKTGSGKTASYIIPAIKHVMLQ---NGREGPHVLIIAPTKELAQQIEIKANQL 835

Query: 294  GNSSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEA 473
              +S ++   ++    +REQ   +++  +IVIAT GRL+DF+      L     +V+DEA
Sbjct: 836  LENSPIKAVAIYASPNRREQINAVKKA-DIVIATFGRLLDFMSSNFVKLNGIGMVVIDEA 894

Query: 474  DRMLDMGFEPQIRKIIDQIRPDRQTLMWSATWPKEVRKLAEDYLXDYVQINIGSLQLSAN 653
            D +L    + Q+  I+  +  D Q LMWSA+W  EVR LAE YL +Y++I + + +L+ N
Sbjct: 895  DNILKNDNQQQLGAILKHVPIDSQYLMWSASWIDEVRDLAEQYLKNYIKIVVDAFELTVN 954

Query: 654  HNILQIV 674
             +I QI+
Sbjct: 955  KDIKQII 961


>UniRef50_Q4P7Y2 Cluster: Putative uncharacterized protein; n=1;
           Ustilago maydis|Rep: Putative uncharacterized protein -
           Ustilago maydis (Smut fungus)
          Length = 568

 Score =  150 bits (363), Expect = 1e-34
 Identities = 89/230 (38%), Positives = 134/230 (58%), Gaps = 24/230 (10%)
 Frame = +3

Query: 111 QGKNLVGVAQTGSGKTLAYILPAIVHINNQPPI---RRGDGPIALVLAPTRELAQQIQQV 281
           Q ++L+G+A+TGSGKT ++++P + +I+  P +    +  GP AL+L PTRELAQQI+  
Sbjct: 303 QNRDLIGIAETGSGKTASFLIPLLAYISKLPKLDEHTKALGPQALILVPTRELAQQIETE 362

Query: 282 ASEFGNSSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLV 461
            ++F     +R   + GG    +QA  L  G EIVIATPGRL D +E+    L +CTY+V
Sbjct: 363 TNKFAGRLGLRCVSIVGGRDMNDQAYALRDGAEIVIATPGRLKDCIERHVLVLSQCTYVV 422

Query: 462 LDEADRMLDMGFEPQIRKIID-----QIRPD---------------RQTLMWSATWPKEV 581
           +DEAD+M+DMGFEPQ+  I+D      ++PD               R T+++SAT P  V
Sbjct: 423 MDEADKMVDMGFEPQVNFILDSLPVSNLKPDNAIPEGSADDMVGKYRVTMLYSATMPPSV 482

Query: 582 RKLAEDYLXDYVQINIGSLQLSANHNILQIVD-VCQEHEKENKLNVLLQE 728
            ++A  YL     I IG     A   + QIV+ +  E ++  +L  +LQ+
Sbjct: 483 ERMARVYLRRPATITIGDAG-QAVATVEQIVEFIPTEDQRRTRLISILQQ 531


>UniRef50_A4RK80 Cluster: Pre-mRNA-splicing ATP-dependent RNA helicase
            PRP28; n=1; Magnaporthe grisea|Rep: Pre-mRNA-splicing
            ATP-dependent RNA helicase PRP28 - Magnaporthe grisea
            (Rice blast fungus) (Pyricularia grisea)
          Length = 674

 Score =  150 bits (363), Expect = 1e-34
 Identities = 91/237 (38%), Positives = 132/237 (55%), Gaps = 29/237 (12%)
 Frame = +3

Query: 111  QGKNLVGVAQTGSGKTLAYILPAIVHINNQPPIR---RGDGPIALVLAPTRELAQQIQQV 281
            Q ++L+G+++TGSGKT A++LP + +I   PP+    + +GP AL+LAPTRELA QIQ  
Sbjct: 293  QCRDLIGISKTGSGKTAAFVLPMLSYIEPLPPLNEVTKTEGPYALILAPTRELATQIQAE 352

Query: 282  ASEFGNSSYVRNTCVFGGAPK-REQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYL 458
              +F         C+ G      E A  L  G EI++ATPGRL+D LE+    L +C+Y+
Sbjct: 353  VIKFATRMGFTVVCLIGNKRTIEEDAFALRNGAEIIVATPGRLVDCLERHLLVLSQCSYV 412

Query: 459  VLDEADRMLDMGFEPQIRKIIDQI-----RPD--------------------RQTLMWSA 563
            VLDEADRM+D GFE  I KI+  +     +PD                    RQT+M+SA
Sbjct: 413  VLDEADRMVDGGFEDSIHKILAALPPSNGKPDDRDAEDPNIMSKFLTPNLRYRQTVMYSA 472

Query: 564  TWPKEVRKLAEDYLXDYVQINIGSLQLSANHNILQIVDVCQEHEKENKLNVLLQEIG 734
            T P  V ++A++YL     + IG++  + +    Q + V  E E+ NKL  +L   G
Sbjct: 473  TMPPSVERIAKNYLKHPAMVTIGTIGEAVDTVEQQAMWVVSEDERRNKLRAMLNTYG 529


>UniRef50_A5K9H3 Cluster: Pre-mRNA splicing factor RNA helicase PRP28,
            putative; n=2; Eukaryota|Rep: Pre-mRNA splicing factor
            RNA helicase PRP28, putative - Plasmodium vivax
          Length = 1006

 Score =  149 bits (362), Expect = 1e-34
 Identities = 90/231 (38%), Positives = 130/231 (56%), Gaps = 27/231 (11%)
 Frame = +3

Query: 117  KNLVGVAQTGSGKTLAYILPAIVHINNQPPIR---RGDGPIALVLAPTRELAQQIQQVAS 287
            ++L+G+A+TGSGKT A++LP + ++   PP+      DGP AL++AP+RELA QI    +
Sbjct: 619  RDLIGIAETGSGKTAAFVLPMLAYVKQLPPLTYETSQDGPYALIIAPSRELAIQIFDETN 678

Query: 288  EFGNSSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLD 467
            +F +    R   V GG     QA +L +GVEI+I TPGR+ D LEK  T L +C Y++LD
Sbjct: 679  KFASYCSCRTVAVVGGRNAEAQAFELRKGVEIIIGTPGRIHDCLEKAYTVLNQCNYVILD 738

Query: 468  EADRMLDMGFEPQIRKIIDQI------------------------RPDRQTLMWSATWPK 575
            EADRM+DMGFE  +  I+D+I                        R  R T M+SAT P 
Sbjct: 739  EADRMMDMGFEDSVHFILDKIPTTNLKSEDDALALQEEMMAKAGHRLYRLTQMFSATMPP 798

Query: 576  EVRKLAEDYLXDYVQINIGSLQLSANHNILQIVDVCQEHEKENKLNVLLQE 728
             V +L+  YL     I+IG    +   +I Q ++   E +K+ KL  +L+E
Sbjct: 799  AVERLSRKYLRAPAYISIGD-PGAGKRSIEQKLEFTTEGKKKQKLQEILEE 848


>UniRef50_Q87HW1 Cluster: ATP-dependent RNA helicase, DEAD box
           family; n=6; Vibrio|Rep: ATP-dependent RNA helicase,
           DEAD box family - Vibrio parahaemolyticus
          Length = 421

 Score =  149 bits (361), Expect = 2e-34
 Identities = 78/204 (38%), Positives = 122/204 (59%)
 Frame = +3

Query: 111 QGKNLVGVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVASE 290
           +GK+L+  AQTG+GKT A+ LP I  +  +   +R   P AL+L PTRELAQQ+    ++
Sbjct: 43  EGKDLLAAAQTGTGKTAAFGLPIIQAVQQK---KRNGTPHALILVPTRELAQQVFDNLTQ 99

Query: 291 FGNSSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDE 470
           +   + +R  CV+GG     Q   LE G +I+IATPGRL+D L  G  N+ +   LVLDE
Sbjct: 100 YAEHTDLRIVCVYGGTSIGVQKNKLEEGADILIATPGRLLDHLFNGNVNISKTGVLVLDE 159

Query: 471 ADRMLDMGFEPQIRKIIDQIRPDRQTLMWSATWPKEVRKLAEDYLXDYVQINIGSLQLSA 650
           ADRMLDMGF P +++I+ ++  D+Q +++SAT+ K ++ +A   +   V++ +     +A
Sbjct: 160 ADRMLDMGFWPDLQRILRRLPNDKQIMLFSATFEKRIKTIAYKLMDSPVEVEVSPANTTA 219

Query: 651 NHNILQIVDVCQEHEKENKLNVLL 722
              + Q+V    +  K   L  L+
Sbjct: 220 -ETVKQMVYPVDKKRKRELLAYLI 242


>UniRef50_A3WD13 Cluster: DNA and RNA helicase; n=2;
           Alphaproteobacteria|Rep: DNA and RNA helicase -
           Erythrobacter sp. NAP1
          Length = 484

 Score =  149 bits (361), Expect = 2e-34
 Identities = 97/298 (32%), Positives = 157/298 (52%), Gaps = 2/298 (0%)
 Frame = +3

Query: 111 QGKNLVGVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVASE 290
           +G++L+G+AQTG+GKT A++LP+I  +              LVLAPTREL  QI   A +
Sbjct: 38  EGRDLLGIAQTGTGKTAAFMLPSIDRLREADNRIPFKSCRMLVLAPTRELVSQIAASAKD 97

Query: 291 FGNSSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDE 470
           +G  + ++   + GG    +    L RG +I+IATPGRL+D +++   NL     LVLDE
Sbjct: 98  YGALAGLKVQSIVGGTSVNKDRNKLHRGTDILIATPGRLLDLIDQKAFNLGSVEVLVLDE 157

Query: 471 ADRMLDMGFEPQIRKIIDQIRPDRQTLMWSATWPKEVRKLAEDYLXDYVQINIGSLQLSA 650
           AD+MLD+GF   +R+I   +  +RQTL +SAT PK +++L   Y  + VQ+++     +A
Sbjct: 158 ADQMLDLGFVHALRRISQLVPKERQTLFFSATMPKAIKELVSGYCNNPVQVSVTPESTTA 217

Query: 651 NHNILQIVDVCQEHEKENKLNVLLQEIGQNQDPGARPLYLLKLKEKRXTXPEISDDMDGQ 830
              I Q + + Q+ EK++ L ++L   G+++ PG     L+  + K      +       
Sbjct: 218 -ERIDQYLFMVQQDEKQSLLELILS--GRHKVPGEFERILIFTRTKHGADRVVKKLSRAG 274

Query: 831 LCACTXTNTARKG*SXXPI--LKRVVSSILVATDVGCXRS*CGMGSNFXINFDXPXXP 998
           + A        +      +   +R  + ILVATDV   R     G +  +N++ P  P
Sbjct: 275 IPANAIHGNKSQPQRQRALDEFRRGKTMILVATDVAA-RGIDIPGVSHVLNYELPNVP 331


>UniRef50_A1KUM8 Cluster: Putative ATP-dependent RNA helicase; n=4;
           Neisseria|Rep: Putative ATP-dependent RNA helicase -
           Neisseria meningitidis serogroup C / serotype 2a (strain
           ATCC 700532 /FAM18)
          Length = 483

 Score =  149 bits (361), Expect = 2e-34
 Identities = 83/213 (38%), Positives = 125/213 (58%), Gaps = 3/213 (1%)
 Frame = +3

Query: 114 GKNLVGVAQTGSGKTLAYILPAIVHINNQPPIRRGDG--PIA-LVLAPTRELAQQIQQVA 284
           G +L+  AQTG+GKT A++LP++  +             P+  LVL PTRELA QI Q  
Sbjct: 66  GHDLLAAAQTGTGKTAAFMLPSLERLKRYATASTSPAMHPVRMLVLTPTRELADQIDQNV 125

Query: 285 SEFGNSSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVL 464
             +  +  +R+T +FGG    +Q  DL  G EIV+AT GRL+D +++   +L +   +VL
Sbjct: 126 QSYIKNLPLRHTVLFGGMNMDKQTADLRAGCEIVVATVGRLLDHVKQKNISLNKVEIVVL 185

Query: 465 DEADRMLDMGFEPQIRKIIDQIRPDRQTLMWSATWPKEVRKLAEDYLXDYVQINIGSLQL 644
           DEADRMLDMGF   IRKI+  +   RQTL++SAT+   +RKLA+D++     + + + Q 
Sbjct: 186 DEADRMLDMGFIDDIRKIMQMLPKQRQTLLFSATFSAPIRKLAQDFMNAPETVEVAA-QN 244

Query: 645 SANHNILQIVDVCQEHEKENKLNVLLQEIGQNQ 743
           + N N+ Q +      +K N L  L+ ++  NQ
Sbjct: 245 TTNANVEQHIIAVDTIQKRNLLERLIVDLHMNQ 277


>UniRef50_Q3ZDP1 Cluster: Vasa-like protein; n=7; Neoptera|Rep:
           Vasa-like protein - Anopheles gambiae (African malaria
           mosquito)
          Length = 596

 Score =  149 bits (361), Expect = 2e-34
 Identities = 77/212 (36%), Positives = 131/212 (61%), Gaps = 6/212 (2%)
 Frame = +3

Query: 105 LCQGKNLVGVAQTGSGKTLAYILPAIVHI-NNQPPIR-RGDGPIALVLAPTRELAQQIQQ 278
           +  G++L+  AQTGSGKT A++LP I H+ + +  +  R   P  +++APTRELA QI  
Sbjct: 208 ILNGRDLMACAQTGSGKTAAFMLPMIHHLLDKEDSLELRTRNPYIVIVAPTRELAIQIHD 267

Query: 279 VASEFGNSSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYL 458
              +F + + ++    +GG   + Q + +  G  +++ATPGRL+DF+++G    +   ++
Sbjct: 268 EGRKFAHGTKLKVCVSYGGTAVQHQLQLMRGGCHVLVATPGRLLDFIDRGYVTFENVNFV 327

Query: 459 VLDEADRMLDMGFEPQIRKIIDQI----RPDRQTLMWSATWPKEVRKLAEDYLXDYVQIN 626
           VLDEADRMLDMGF P I K++       +  RQTLM+SAT+P E+++LA  +L +Y+ + 
Sbjct: 328 VLDEADRMLDMGFLPSIEKVMGHATMPEKQQRQTLMFSATFPAEIQELAGKFLHNYICVF 387

Query: 627 IGSLQLSANHNILQIVDVCQEHEKENKLNVLL 722
           +G +   A  ++ Q + + ++ +K  KL  +L
Sbjct: 388 VGIVG-GACADVEQTIHLVEKFKKRKKLEEIL 418


>UniRef50_Q384E1 Cluster: Mitochondrial DEAD box protein; n=5;
           Trypanosoma|Rep: Mitochondrial DEAD box protein -
           Trypanosoma brucei
          Length = 546

 Score =  149 bits (361), Expect = 2e-34
 Identities = 87/229 (37%), Positives = 128/229 (55%), Gaps = 5/229 (2%)
 Frame = +3

Query: 105 LCQGKNLVGVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVA 284
           L +G +++G+A TGSGKT+A+ +PA+      P       P  +VLAPTREL QQ  +V 
Sbjct: 152 LDEGHDMIGLAPTGSGKTVAFAVPALKKFQWSP----NGSPRIVVLAPTRELVQQTAKVF 207

Query: 285 SEFGNSSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVL 464
            +  +S  VR    +GGAP+  QAR L  G ++++A PGRL DFL+ G       ++LV 
Sbjct: 208 HQL-SSGKVRVCEAYGGAPREAQARRLHNGCDVLVACPGRLKDFLQNGDVIFDEVSFLVF 266

Query: 465 DEADRMLDMGFEPQIRKIIDQIRPDR--QTLMWSATWPKEVRKLAEDYLXD---YVQINI 629
           DEADR+LDMGF+ Q+  I+      R  QT+MWSATWP  V +LA++YL      ++   
Sbjct: 267 DEADRLLDMGFKVQLDDILGYFSSHRPAQTMMWSATWPPVVEQLAQEYLSQNRYVIRSGT 326

Query: 630 GSLQLSANHNILQIVDVCQEHEKENKLNVLLQEIGQNQDPGARPLYLLK 776
               L  N NI Q +      E+  K  V L + G+  +  A+ +  ++
Sbjct: 327 AGTGLQVNENIKQHIFFADAPEERVKTLVSLIKEGKIDENTAKMMIFVE 375


>UniRef50_Q9FZ92 Cluster: Putative DEAD-box ATP-dependent RNA
           helicase 44; n=1; Arabidopsis thaliana|Rep: Putative
           DEAD-box ATP-dependent RNA helicase 44 - Arabidopsis
           thaliana (Mouse-ear cress)
          Length = 622

 Score =  149 bits (361), Expect = 2e-34
 Identities = 87/229 (37%), Positives = 135/229 (58%), Gaps = 20/229 (8%)
 Frame = +3

Query: 117 KNLVGVAQTGSGKTLAYILPAIVHINNQPPIR---RGDGPIALVLAPTRELAQQIQQVAS 287
           ++++G++ TGSGKT A++LP + +I+  PP+R   + +GP ALV+ PTRELA QI++   
Sbjct: 248 RDVIGISATGSGKTAAFVLPMLAYISRLPPMREENQTEGPYALVMVPTRELAHQIEEETV 307

Query: 288 EFGNSSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLD 467
           +F      +   + G     +QA  L +G EIVIATPGRL+D LE+    L +C YLVLD
Sbjct: 308 KFSRYLGFKAVSITGWESIEKQALKLSQGCEIVIATPGRLLDCLERRYVVLNQCNYLVLD 367

Query: 468 EADRMLDMGFEPQIRKIID-----QIRPD------------RQTLMWSATWPKEVRKLAE 596
           EADRM+DM FEPQ+ +++D      ++P+            R T M+SAT    V +LA 
Sbjct: 368 EADRMIDMDFEPQVSEVLDVMPCSNLKPEKEDEELEEKKIYRTTYMFSATMLLSVERLAR 427

Query: 597 DYLXDYVQINIGSLQLSANHNILQIVDVCQEHEKENKLNVLLQEIGQNQ 743
            +L + V + IG         I Q V + +E +K ++L  L+ ++G ++
Sbjct: 428 KFLRNPVVVTIG----ETTKFITQQVIMTKESDKFSRLKKLIDDLGDDK 472


>UniRef50_A6PQ62 Cluster: DEAD/DEAH box helicase domain protein;
           n=1; Victivallis vadensis ATCC BAA-548|Rep: DEAD/DEAH
           box helicase domain protein - Victivallis vadensis ATCC
           BAA-548
          Length = 542

 Score =  149 bits (360), Expect = 2e-34
 Identities = 79/175 (45%), Positives = 113/175 (64%), Gaps = 3/175 (1%)
 Frame = +3

Query: 102 SLCQGKNLVGVAQTGSGKTLAYILPAIVHINNQPPIRRGDG-PIALVLAPTRELAQQIQQ 278
           +L +G++L G AQTG+GKT A++L     + N P   R  G P ALVLAPTRELA QIQ+
Sbjct: 158 ALLEGRDLAGKAQTGTGKTAAFLLAVFTRLLNHPLEERKPGCPRALVLAPTRELAMQIQK 217

Query: 279 VASEFGNSSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYL 458
            A      + + +  VFGG    +Q R LE+ V++VI TPGR+ID+   G+  L +   L
Sbjct: 218 DAEVLEIFTGLTSVVVFGGMDHEKQRRSLEQPVDLVIGTPGRIIDYSRGGSLKLSKVEVL 277

Query: 459 VLDEADRMLDMGFEPQIRKIIDQI--RPDRQTLMWSATWPKEVRKLAEDYLXDYV 617
           V+DEADRMLDMGF P +++I+ Q+  + +RQTL++SAT    + +LA  +L + V
Sbjct: 278 VIDEADRMLDMGFIPDVKRIVSQLPRKGERQTLLFSATLEDHILRLASGWLAEPV 332


>UniRef50_A5UZK3 Cluster: DEAD/DEAH box helicase domain protein;
           n=12; Bacteria|Rep: DEAD/DEAH box helicase domain
           protein - Roseiflexus sp. RS-1
          Length = 467

 Score =  149 bits (360), Expect = 2e-34
 Identities = 75/173 (43%), Positives = 111/173 (64%)
 Frame = +3

Query: 114 GKNLVGVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVASEF 293
           G++++G+AQTG+GKT A++LP +  +   P   RG    A+++ PTRELA+QIQ V    
Sbjct: 38  GRDVIGIAQTGTGKTAAFVLPILQRLMRGP---RGRVR-AMIVTPTRELAEQIQGVIEAL 93

Query: 294 GNSSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEA 473
           G  + +R+  ++GG   + Q + L RGVEI +  PGRL+D LE+GT  L+    L+LDEA
Sbjct: 94  GKYTGLRSVTLYGGVGYQGQIQRLRRGVEIAVVCPGRLLDHLERGTLTLEHLDMLILDEA 153

Query: 474 DRMLDMGFEPQIRKIIDQIRPDRQTLMWSATWPKEVRKLAEDYLXDYVQINIG 632
           D+M DMGF P +R+I+      RQT+++SAT P  +R LA + L +   I IG
Sbjct: 154 DQMFDMGFLPDVRRILRLAPAQRQTMLFSATMPDAIRALAREALREPQTIQIG 206


>UniRef50_Q44NG9 Cluster: Helicase, C-terminal:DEAD/DEAH box
           helicase, N-terminal; n=9; Bacteroidetes/Chlorobi
           group|Rep: Helicase, C-terminal:DEAD/DEAH box helicase,
           N-terminal - Chlorobium limicola DSM 245
          Length = 499

 Score =  148 bits (358), Expect = 4e-34
 Identities = 80/214 (37%), Positives = 130/214 (60%)
 Frame = +3

Query: 105 LCQGKNLVGVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVA 284
           +  G +L+G AQTG+GKT A+ +P +  +N      +     +L++ PTRELA QI +  
Sbjct: 116 ILDGNDLLGCAQTGTGKTAAFAIPVLQLLNAVKTNEKKRKIRSLIITPTRELAIQIGESF 175

Query: 285 SEFGNSSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVL 464
             +G  + + +T +FGG  +  Q   L++G++I+IATPGRL+D + +G  +L+   + VL
Sbjct: 176 KAYGRHTGLTSTVIFGGVNQNPQTASLQKGIDILIATPGRLLDLMNQGHLHLRNIEFFVL 235

Query: 465 DEADRMLDMGFEPQIRKIIDQIRPDRQTLMWSATWPKEVRKLAEDYLXDYVQINIGSLQL 644
           DEADRMLDMGF   IRKI+ ++   +Q+L +SAT P E+ +LA   L + V++++  +  
Sbjct: 236 DEADRMLDMGFIHDIRKILAELPKKKQSLFFSATMPPEITRLAASILHNPVEVSVTPVSS 295

Query: 645 SANHNILQIVDVCQEHEKENKLNVLLQEIGQNQD 746
           +      QI  V    +K NK N+L+  + +NQD
Sbjct: 296 TVEIINQQIFFV----DKGNKNNLLVHLL-KNQD 324


>UniRef50_Q0RTL3 Cluster: Cold-shock DeaD box ATP-dependent RNA
           helicase; n=2; Bacteria|Rep: Cold-shock DeaD box
           ATP-dependent RNA helicase - Frankia alni (strain
           ACN14a)
          Length = 608

 Score =  148 bits (358), Expect = 4e-34
 Identities = 80/177 (45%), Positives = 110/177 (62%), Gaps = 1/177 (0%)
 Frame = +3

Query: 105 LCQGKNLVGVAQTGSGKTLAYILPAIVHINNQPPIRRGD-GPIALVLAPTRELAQQIQQV 281
           L  G++L+G A TG+GKT A+ LP +  + +    R GD GP ALVL PTRELA Q+ + 
Sbjct: 91  LVAGRDLLGQAATGTGKTAAFALPLLHRLTDD---RTGDHGPQALVLVPTRELAVQVSEA 147

Query: 282 ASEFGNSSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLV 461
              +G     R   V+GGAP   Q R L +GV++V+ATPGR +D + +GT  L     +V
Sbjct: 148 IHRYGRDLGARVLPVYGGAPIGRQVRALVQGVDVVVATPGRALDHMGRGTLRLDGLHTVV 207

Query: 462 LDEADRMLDMGFEPQIRKIIDQIRPDRQTLMWSATWPKEVRKLAEDYLXDYVQINIG 632
           LDEAD MLDMGF   I  I++Q    RQT+++SAT P  + ++A  +L D V+I IG
Sbjct: 208 LDEADEMLDMGFAEDIDAILEQAPQKRQTVLFSATLPPRMDQIARRHLRDPVRIQIG 264


>UniRef50_Q9NQI0 Cluster: Probable ATP-dependent RNA helicase DDX4;
           n=49; Euteleostomi|Rep: Probable ATP-dependent RNA
           helicase DDX4 - Homo sapiens (Human)
          Length = 724

 Score =  148 bits (358), Expect = 4e-34
 Identities = 83/219 (37%), Positives = 130/219 (59%), Gaps = 9/219 (4%)
 Frame = +3

Query: 114 GKNLVGVAQTGSGKTLAYILPAIVHINNQ----PPIRRGDGPIALVLAPTRELAQQIQQV 281
           G++L+  AQTGSGKT A++LP + H+ +        +    P  +++APTREL  QI   
Sbjct: 325 GRDLMACAQTGSGKTAAFLLPILAHMMHDGITASRFKELQEPECIIVAPTRELVNQIYLE 384

Query: 282 ASEFGNSSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLV 461
           A +F   + VR   ++GG       R + +G  I+ ATPGRL+D + K    L++  YLV
Sbjct: 385 ARKFSFGTCVRAVVIYGGTQLGHSIRQIVQGCNILCATPGRLMDIIGKEKIGLKQIKYLV 444

Query: 462 LDEADRMLDMGFEPQIRKIID----QIRPDRQTLMWSATWPKEVRKLAEDYL-XDYVQIN 626
           LDEADRMLDMGF P+++K+I       +  RQTLM+SAT+P+E+++LA ++L  +Y+ + 
Sbjct: 445 LDEADRMLDMGFGPEMKKLISCPGMPSKEQRQTLMFSATFPEEIQRLAAEFLKSNYLFVA 504

Query: 627 IGSLQLSANHNILQIVDVCQEHEKENKLNVLLQEIGQNQ 743
           +G +   A  ++ Q V    +  K  KL  +L+ IG  +
Sbjct: 505 VGQVG-GACRDVQQTVLQVGQFSKREKLVEILRNIGDER 542


>UniRef50_Q67NW1 Cluster: ATP-dependent RNA helicase; n=5;
           Firmicutes|Rep: ATP-dependent RNA helicase -
           Symbiobacterium thermophilum
          Length = 526

 Score =  147 bits (357), Expect = 6e-34
 Identities = 78/182 (42%), Positives = 115/182 (63%)
 Frame = +3

Query: 102 SLCQGKNLVGVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQV 281
           +L QGK+++G AQTG+GKT A+ +P +  +    P +R     ALVL PTRELA Q+ + 
Sbjct: 39  ALLQGKDVIGQAQTGTGKTAAFGVPIVERL---VPGQRAVQ--ALVLTPTRELAIQVAEE 93

Query: 282 ASEFGNSSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLV 461
            ++ G  + V+   ++GG     Q R L  GV++VI TPGR++D L + T +L +   +V
Sbjct: 94  ITKIGRHARVKTIAIYGGQSIERQIRSLRFGVDVVIGTPGRILDHLGRSTLDLSQVRMVV 153

Query: 462 LDEADRMLDMGFEPQIRKIIDQIRPDRQTLMWSATWPKEVRKLAEDYLXDYVQINIGSLQ 641
           LDEAD MLDMGF   I KI+     +RQTL++SAT P E+R+LA  Y+ D + I++   Q
Sbjct: 154 LDEADEMLDMGFIEDIEKILQNTPAERQTLLFSATMPPEIRRLAGRYMRDPITISVTPQQ 213

Query: 642 LS 647
           L+
Sbjct: 214 LT 215


>UniRef50_A6DIU5 Cluster: Probable ATP dependent RNA helicase; n=1;
           Lentisphaera araneosa HTCC2155|Rep: Probable ATP
           dependent RNA helicase - Lentisphaera araneosa HTCC2155
          Length = 537

 Score =  147 bits (357), Expect = 6e-34
 Identities = 83/214 (38%), Positives = 122/214 (57%)
 Frame = +3

Query: 105 LCQGKNLVGVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVA 284
           L Q  +++G AQTG+GKT A+ LP +  I  +P +++   P AL+L PTRELA Q+ +  
Sbjct: 37  LSQDHDIIGQAQTGTGKTAAFGLPIVQKI--EPGLKK---PQALILCPTRELAIQVNEEI 91

Query: 285 SEFGNSSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVL 464
             F     +    ++GGAP  +Q R L++GV++V+ATPGR I F+E G   L    YLVL
Sbjct: 92  KSFCKGRGITTVTLYGGAPIMDQKRALKKGVDLVVATPGRCIHFIEDGKLELDSLEYLVL 151

Query: 465 DEADRMLDMGFEPQIRKIIDQIRPDRQTLMWSATWPKEVRKLAEDYLXDYVQINIGSLQL 644
           DEAD ML+MGF   + K++     DR  LM+SAT P  ++K+AE Y+ + + I   S  +
Sbjct: 152 DEADEMLNMGFVEDVEKVLKASPDDRTVLMFSATMPPRLKKIAESYMHNSITIKAKSETM 211

Query: 645 SANHNILQIVDVCQEHEKENKLNVLLQEIGQNQD 746
           +       I  V  E   ENK   L + +   +D
Sbjct: 212 TME----TIDQVVYEAYPENKFAALCRIMDLEKD 241


>UniRef50_Q8D7D0 Cluster: Superfamily II DNA and RNA helicase; n=20;
           Gammaproteobacteria|Rep: Superfamily II DNA and RNA
           helicase - Vibrio vulnificus
          Length = 418

 Score =  147 bits (356), Expect = 7e-34
 Identities = 83/207 (40%), Positives = 125/207 (60%), Gaps = 1/207 (0%)
 Frame = +3

Query: 105 LCQGKNLVGVAQTGSGKTLAYILPAIVHINNQPPIRRGDG-PIALVLAPTRELAQQIQQV 281
           L QG++++  AQTG+GKT AY LP I  ++ Q         P AL+LAPTRELAQQ+   
Sbjct: 37  LLQGRDVLAAAQTGTGKTAAYGLPLIQMLSRQSREETAPKHPRALILAPTRELAQQVFDN 96

Query: 282 ASEFGNSSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLV 461
             ++   + +    V+GG   R Q   L +GV+I+IATPGRL+D L    T+L +   LV
Sbjct: 97  LKQYAQHTELAIVTVYGGTSIRVQQEQLAKGVDILIATPGRLLDHLFTKKTSLNQLQMLV 156

Query: 462 LDEADRMLDMGFEPQIRKIIDQIRPDRQTLMWSATWPKEVRKLAEDYLXDYVQINIGSLQ 641
           LDEADRMLDMGF P I++I+ ++  +RQTL++SAT+   V+ LA   + + V++ + +  
Sbjct: 157 LDEADRMLDMGFLPDIQRIMKRMPEERQTLLFSATFETRVKALAYRLMKEPVEVQVAAAN 216

Query: 642 LSANHNILQIVDVCQEHEKENKLNVLL 722
            +A+  + Q+V    +  K   L  L+
Sbjct: 217 STAD-TVKQMVYPVDKKRKSELLAYLI 242


>UniRef50_Q480Z7 Cluster: ATP-dependent RNA helicase, DEAD box
           family; n=2; Alteromonadales|Rep: ATP-dependent RNA
           helicase, DEAD box family - Colwellia psychrerythraea
           (strain 34H / ATCC BAA-681) (Vibriopsychroerythus)
          Length = 399

 Score =  147 bits (355), Expect = 1e-33
 Identities = 80/207 (38%), Positives = 121/207 (58%), Gaps = 1/207 (0%)
 Frame = +3

Query: 102 SLCQGKNLVGVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQV 281
           +L  G +L+G+AQTG+GKT A+ LP I          +     +L+L PTRELA QI Q 
Sbjct: 35  ALINGNDLLGIAQTGTGKTAAFSLPIINKFGRNKIDIKAKSTRSLILTPTRELASQIMQN 94

Query: 282 ASEFGNSSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLV 461
             ++ +   ++   V+GG  ++ Q   +E G++I++ATPGRL+D +E G  N +     V
Sbjct: 95  IDDYSDGLGLKTKVVYGGVGRQAQVDSIELGLDILVATPGRLLDLIETGDINFKALEVFV 154

Query: 462 LDEADRMLDMGFEPQIRKIIDQIRPDRQTLMWSATWPKEVRKLAEDYLXDYVQINIGSLQ 641
           LDEAD MLDMGF   ++ II ++   RQTL++SAT P E+  LAE  L D  +I     Q
Sbjct: 155 LDEADTMLDMGFFKDVQSIISKLPKSRQTLLFSATMPAEIEILAEAILTDPTKI-----Q 209

Query: 642 LSANHNILQIVDVCQEH-EKENKLNVL 719
           ++A    + +V+    H +K NK+ +L
Sbjct: 210 ITAETVTIDLVNQSVYHLDKSNKVPLL 236


>UniRef50_Q9GV12 Cluster: Vasa-related protein CnVAS2; n=14;
            Eumetazoa|Rep: Vasa-related protein CnVAS2 - Hydra
            magnipapillata (Hydra)
          Length = 890

 Score =  147 bits (355), Expect = 1e-33
 Identities = 85/219 (38%), Positives = 131/219 (59%), Gaps = 10/219 (4%)
 Frame = +3

Query: 117  KNLVGVAQTGSGKTLAYILPAIVHINNQ--PPIRRG-DG---PIALVLAPTRELAQQIQQ 278
            ++++  AQTGSGKT +++LP I ++ N+    I    DG   P+A +LAPTREL  Q+  
Sbjct: 488  RDVMACAQTGSGKTASFLLPIITNLMNEGLDNIDSNIDGVALPLAAILAPTRELVVQLFT 547

Query: 279  VASEFGNSSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYL 458
             A +F  +S ++   ++GG     QA  L  G  +++ATPGRL DF+++G  N Q   YL
Sbjct: 548  EARKFSYNSSLKPVVLYGGVAVAHQADRLRMGCHLLVATPGRLEDFIKRGKVNFQNLKYL 607

Query: 459  VLDEADRMLDMGFEPQIRKIID--QIRPD--RQTLMWSATWPKEVRKLAEDYLXDYVQIN 626
            +LDEAD+M+DMGF PQI  II+   + P   R TLM+SAT+P +++ LA  +L DY+ + 
Sbjct: 608  ILDEADKMIDMGFGPQIEHIIEFSGMPPKGIRNTLMFSATFPDQIQHLAAQFLNDYLFLT 667

Query: 627  IGSLQLSANHNILQIVDVCQEHEKENKLNVLLQEIGQNQ 743
            +G +  +       ++ V    ++E  L  LLQ  G +Q
Sbjct: 668  VGRVGGTCTDVTQSVIQVSGTKKRET-LENLLQTSGTDQ 705


>UniRef50_A2EPC6 Cluster: Type III restriction enzyme, res subunit
           family protein; n=1; Trichomonas vaginalis G3|Rep: Type
           III restriction enzyme, res subunit family protein -
           Trichomonas vaginalis G3
          Length = 505

 Score =  147 bits (355), Expect = 1e-33
 Identities = 80/206 (38%), Positives = 126/206 (61%), Gaps = 5/206 (2%)
 Frame = +3

Query: 114 GKNLVGVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVASEF 293
           G NL+ V+ TG+GKTL +++P + H+  Q    + +GP AL+L+PT  LA+Q   V  + 
Sbjct: 153 GNNLIVVSPTGTGKTLCFLIPLLYHVLAQG---KQEGPTALILSPTELLARQTTLVCHQL 209

Query: 294 GNSSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEA 473
             S+ ++   + G   K +Q   L +G +++I TPGRL++FL+  T N Q CTY+V+DEA
Sbjct: 210 IKSTDIKCVELTGNQMKHKQQSSLMKGADVIIGTPGRLMNFLK--TVNWQFCTYVVVDEA 267

Query: 474 DRMLDMGFEPQIRKIIDQIRPDRQTLMWSATWPKEVRKLAEDYLXDYVQINIGSL---QL 644
           DR+ + GF  Q+R I+D IRPDRQTL++ AT P ++ +L+ + L    ++ IG     Q 
Sbjct: 268 DRIFETGFLRQLRSIMDYIRPDRQTLLFGATLPPQIEELSMNSLKFSTRVQIGKTGAPQS 327

Query: 645 SANHNILQIVDVCQEHE--KENKLNV 716
           +  HN +   D  ++ E  KEN L +
Sbjct: 328 NIEHNFVIFDDPAKKREWIKENLLKL 353


>UniRef50_Q9P9G7 Cluster: DEAD-box RNA helicase; n=3;
           Methanosarcinaceae|Rep: DEAD-box RNA helicase -
           Methanococcoides burtonii
          Length = 522

 Score =  147 bits (355), Expect = 1e-33
 Identities = 78/167 (46%), Positives = 108/167 (64%)
 Frame = +3

Query: 105 LCQGKNLVGVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVA 284
           + +GK+++G A TGSGKTLA+    I        I +G+G  ALVL PTRELA+Q+Q   
Sbjct: 36  ILEGKDIIGGAATGSGKTLAFGCGII------QKIEKGNGIRALVLTPTRELAEQVQNSL 89

Query: 285 SEFGNSSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVL 464
            EF     +R   ++GG     Q R LER  ++V+ATPGRL+D +E+GT +L     LVL
Sbjct: 90  KEFSRHKQLRVAPIYGGVAINPQIRQLERA-DVVVATPGRLLDHIERGTIDLGDVEILVL 148

Query: 465 DEADRMLDMGFEPQIRKIIDQIRPDRQTLMWSATWPKEVRKLAEDYL 605
           DEADRMLDMGF   + +IID+   DRQT+M+SAT  K+++ L+  Y+
Sbjct: 149 DEADRMLDMGFIDDVEEIIDECPSDRQTMMFSATVSKDIQYLSSKYM 195


>UniRef50_Q0G0P8 Cluster: Superfamily II DNA and RNA helicase; n=2;
           Aurantimonadaceae|Rep: Superfamily II DNA and RNA
           helicase - Fulvimarina pelagi HTCC2506
          Length = 457

 Score =  146 bits (354), Expect = 1e-33
 Identities = 75/198 (37%), Positives = 122/198 (61%), Gaps = 3/198 (1%)
 Frame = +3

Query: 114 GKNLVGVAQTGSGKTLAYILPAIVH---INNQPPIRRGDGPIALVLAPTRELAQQIQQVA 284
           G++++G+AQTG+GKT A+ LP + H   +  +P  R      AL+L+PTRELA QI +  
Sbjct: 41  GRDMLGIAQTGTGKTAAFALPLLHHLMTVGGKPTTRTTK---ALILSPTRELAVQIAESI 97

Query: 285 SEFGNSSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVL 464
           ++    + + +  VFGG   R Q + L RGV+I++ATPGRL+D +E+   +L+   +L+L
Sbjct: 98  ADLSEGTPISHCVVFGGVSVRPQIQALARGVDILVATPGRLLDLMEQRAIDLRETRHLIL 157

Query: 465 DEADRMLDMGFEPQIRKIIDQIRPDRQTLMWSATWPKEVRKLAEDYLXDYVQINIGSLQL 644
           DEADRMLDMGF   + KI+ +   DRQ++M+SAT PK +  L++  L +  ++++    +
Sbjct: 158 DEADRMLDMGFVRDVMKIVGKCPDDRQSMMFSATMPKPIEDLSKKILTNPQKVSVTPAVV 217

Query: 645 SANHNILQIVDVCQEHEK 698
           +       +  V Q  +K
Sbjct: 218 TVEKIAQSVFSVPQRAKK 235


>UniRef50_A7CUH7 Cluster: DEAD/DEAH box helicase domain protein;
           n=1; Opitutaceae bacterium TAV2|Rep: DEAD/DEAH box
           helicase domain protein - Opitutaceae bacterium TAV2
          Length = 536

 Score =  146 bits (354), Expect = 1e-33
 Identities = 78/173 (45%), Positives = 108/173 (62%)
 Frame = +3

Query: 114 GKNLVGVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVASEF 293
           G+++ G AQTG+GKT A+ LP +  +       R      LVL PTRELA Q+++   ++
Sbjct: 170 GRDVTGSAQTGTGKTAAFALPILHKLGAHERRLR-----CLVLEPTRELALQVEEAFQKY 224

Query: 294 GNSSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEA 473
              + +  T V+GG    +Q  DL+RGV++V ATPGRL+D +E+GT  L     LVLDE 
Sbjct: 225 SKYTDLTATVVYGGVGYGKQREDLQRGVDVVAATPGRLLDHIEQGTMTLADVEILVLDEV 284

Query: 474 DRMLDMGFEPQIRKIIDQIRPDRQTLMWSATWPKEVRKLAEDYLXDYVQINIG 632
           DRMLDMGF P +++I+ Q    RQTL +SAT P E+ +LA   L D V+I IG
Sbjct: 285 DRMLDMGFLPDVKRIVQQCPQARQTLFFSATLPPELAQLASWALRDPVEIKIG 337


>UniRef50_Q4UE18 Cluster: RNA helicase, putative; n=2;
           Theileria|Rep: RNA helicase, putative - Theileria
           annulata
          Length = 620

 Score =  146 bits (354), Expect = 1e-33
 Identities = 84/227 (37%), Positives = 133/227 (58%), Gaps = 11/227 (4%)
 Frame = +3

Query: 102 SLCQGKNLVGVAQTGSGKTLAYILPAIVH---INNQPPIRRGDGPIALVLAPTRELAQQI 272
           S+  G++++GV+ TG+GKTL +++P I+    I  + PI   +GP  LV+ P+RELA QI
Sbjct: 222 SVLLGRDVIGVSSTGTGKTLVFVIPMIMQSWEIELRLPIESREGPFGLVICPSRELASQI 281

Query: 273 QQVASEFGNSSYVRN--------TCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKG 428
             +   F  + Y+ N        +CV GG   ++Q   ++ GV +VIATPGRL  FL   
Sbjct: 282 SDITKYF--TGYIYNYGGPKLYCSCVIGGTDIKDQEFTIKSGVHMVIATPGRLNYFLNSR 339

Query: 429 TTNLQRCTYLVLDEADRMLDMGFEPQIRKIIDQIRPDRQTLMWSATWPKEVRKLAEDYLX 608
             NL +C YL  DEADR +D+GF+ +I  I +      QTL++SAT   ++++ A+  L 
Sbjct: 340 IINLTQCRYLCFDEADRTIDLGFDTEINGIFNHFNNQHQTLLFSATMSIKIQEFAKSALT 399

Query: 609 DYVQINIGSLQLSANHNILQIVDVCQEHEKENKLNVLLQEIGQNQDP 749
           + + +N+G L  S N N+ Q++ +     KE+KL +LLQ + +   P
Sbjct: 400 NPILVNVG-LPGSPNKNVKQLLILV---PKESKLPMLLQCLKKTPPP 442


>UniRef50_A6DHU9 Cluster: DEAD/DEAH box helicase-like protein; n=1;
           Lentisphaera araneosa HTCC2155|Rep: DEAD/DEAH box
           helicase-like protein - Lentisphaera araneosa HTCC2155
          Length = 412

 Score =  146 bits (353), Expect = 2e-33
 Identities = 70/192 (36%), Positives = 123/192 (64%), Gaps = 2/192 (1%)
 Frame = +3

Query: 111 QGKNLVGVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVASE 290
           +GK+L+  +QTG+GKTLA+  P I  IN  PP ++    + LVL PTRELA Q+++  + 
Sbjct: 37  EGKDLLAESQTGTGKTLAFSFPLIERINTLPPKKKKISILGLVLVPTRELALQVEKAFTN 96

Query: 291 FGNSSY--VRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVL 464
           +   S   ++   + GG     Q R L  G++++IATPGR+I+ +  G   L     L+L
Sbjct: 97  YAEFSLRPIKTATLIGGENIDGQIRKLRMGLDVLIATPGRIIELINLGEVRLVELEMLIL 156

Query: 465 DEADRMLDMGFEPQIRKIIDQIRPDRQTLMWSATWPKEVRKLAEDYLXDYVQINIGSLQL 644
           DEAD+MLD+GF  +++++++ +   RQ L++SAT P++V++LAE++L   V++ I   Q+
Sbjct: 157 DEADKMLDLGFADELKELLEALPKKRQNLLFSATLPQKVQQLAEEFLNAAVELRISRDQI 216

Query: 645 SANHNILQIVDV 680
           + ++   ++++V
Sbjct: 217 TGDNIEQRVIEV 228


>UniRef50_Q89UH0 Cluster: Dead-box ATP-dependent RNA helicase; n=23;
           Alphaproteobacteria|Rep: Dead-box ATP-dependent RNA
           helicase - Bradyrhizobium japonicum
          Length = 530

 Score =  145 bits (352), Expect = 2e-33
 Identities = 77/189 (40%), Positives = 115/189 (60%), Gaps = 3/189 (1%)
 Frame = +3

Query: 114 GKNLVGVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVASEF 293
           G+++VG+AQTG+GKT ++ LP +  +       +      LVL+PTREL+ QI    + +
Sbjct: 53  GRDVVGIAQTGTGKTASFALPILHRLLEHRIKPQPKTTRVLVLSPTRELSGQILDSFNAY 112

Query: 294 GNSSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEA 473
           G    + +T   GG P   Q R L +GVE+++ATPGRL+D ++     L    +LVLDEA
Sbjct: 113 GRHIRLSSTLAIGGVPMGRQVRSLMQGVEVLVATPGRLLDLVQSNGLKLGSVEFLVLDEA 172

Query: 474 DRMLDMGFEPQIRKIIDQIRPDRQTLMWSATWPKEVRKLAEDYLXDYVQINIGSLQLSA- 650
           DRMLDMGF   IRKI+ ++   RQTL +SAT PK++ +LA+  L D  ++ +  +  +A 
Sbjct: 173 DRMLDMGFINDIRKIVAKLPIKRQTLFFSATMPKDIAELADSMLRDPARVAVTPVSSTAE 232

Query: 651 --NHNILQI 671
             N  ILQ+
Sbjct: 233 RINQRILQV 241


>UniRef50_Q3AZR1 Cluster: DEAD/DEAH box helicase-like; n=2;
           Synechococcus|Rep: DEAD/DEAH box helicase-like -
           Synechococcus sp. (strain CC9902)
          Length = 458

 Score =  145 bits (352), Expect = 2e-33
 Identities = 84/205 (40%), Positives = 122/205 (59%)
 Frame = +3

Query: 111 QGKNLVGVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVASE 290
           QGK+++  AQTG+GKT A+ILP I  +  +   +R     +LVL PTRELA Q++  A  
Sbjct: 60  QGKDIMASAQTGTGKTAAFILPIIELLRAEDKPKRYQVH-SLVLTPTRELAAQVEASAKA 118

Query: 291 FGNSSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDE 470
           +     +R+  VFGG   R Q + L+ GV+I++ATPGRL+D + +          LVLDE
Sbjct: 119 YTKYLALRSDAVFGGVSIRPQVKRLQGGVDILVATPGRLLDLINQKMIRFDNLKVLVLDE 178

Query: 471 ADRMLDMGFEPQIRKIIDQIRPDRQTLMWSATWPKEVRKLAEDYLXDYVQINIGSLQLSA 650
           ADRMLDMGF   I+K+I+ +  +RQ +M+SAT+   ++KLA   L D V+I   S+Q  A
Sbjct: 179 ADRMLDMGFIRDIKKVIEYLPKNRQNMMFSATFSTPIKKLALGLLNDPVEIK-ASVQNQA 237

Query: 651 NHNILQIVDVCQEHEKENKLNVLLQ 725
              I  +V  C    K + L  L++
Sbjct: 238 APTIEHLVHPCDMARKVDLLCHLIK 262


>UniRef50_A1XCP2 Cluster: Vasa-like protein; n=2; Coelomata|Rep:
           Vasa-like protein - Macrobrachium rosenbergii (Giant
           fresh water prawn)
          Length = 710

 Score =  145 bits (352), Expect = 2e-33
 Identities = 84/219 (38%), Positives = 129/219 (58%), Gaps = 9/219 (4%)
 Frame = +3

Query: 114 GKNLVGVAQTGSGKTLAYILPAIVHINNQPPIRRG----DGPIALVLAPTRELAQQIQQV 281
           G +L+  AQTGSGKT A++LP +  +               P A+++APTREL  QI   
Sbjct: 315 GGDLMACAQTGSGKTAAFLLPILQQLMADGVAASSFVELQEPEAIIVAPTRELINQIFLE 374

Query: 282 ASEFGNSSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLV 461
           A +F   + VR   V+GG     Q R++ +G  IV  TPGRL+D +++G   L +  YLV
Sbjct: 375 ARKFAYGTCVRPVVVYGGVNTGFQLREISKGCNIVCGTPGRLLDVIQRGWIGLTKLRYLV 434

Query: 462 LDEADRMLDMGFEPQIRKIIDQ----IRPDRQTLMWSATWPKEVRKLAEDYL-XDYVQIN 626
           LDEADRMLDMGFEP +R+++       + +RQTL++SAT+P++++KLA D+L  DY+ + 
Sbjct: 435 LDEADRMLDMGFEPDMRRLVASPGMPPKENRQTLLFSATYPQDIQKLAADFLKTDYLFLA 494

Query: 627 IGSLQLSANHNILQIVDVCQEHEKENKLNVLLQEIGQNQ 743
           +G +   A  ++ Q      ++ K  +L   L+ IG  +
Sbjct: 495 VGIVG-GACSDVEQTFVQVTKYSKREQLLDFLKTIGNER 532


>UniRef50_P25888 Cluster: Putative ATP-dependent RNA helicase rhlE;
           n=122; cellular organisms|Rep: Putative ATP-dependent
           RNA helicase rhlE - Escherichia coli (strain K12)
          Length = 454

 Score =  145 bits (351), Expect = 3e-33
 Identities = 75/208 (36%), Positives = 125/208 (60%), Gaps = 1/208 (0%)
 Frame = +3

Query: 102 SLCQGKNLVGVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPI-ALVLAPTRELAQQIQQ 278
           ++ +G++L+  AQTG+GKT  + LP + H+  + P  +G  P+ AL+L PTRELA QI +
Sbjct: 34  AVLEGRDLMASAQTGTGKTAGFTLPLLQHLITRQPHAKGRRPVRALILTPTRELAAQIGE 93

Query: 279 VASEFGNSSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYL 458
              ++     +R+  VFGG     Q   L  GV++++ATPGRL+D   +    L +   L
Sbjct: 94  NVRDYSKYLNIRSLVVFGGVSINPQMMKLRGGVDVLVATPGRLLDLEHQNAVKLDQVEIL 153

Query: 459 VLDEADRMLDMGFEPQIRKIIDQIRPDRQTLMWSATWPKEVRKLAEDYLXDYVQINIGSL 638
           VLDEADRMLDMGF   IR+++ ++   RQ L++SAT+  +++ LAE  L + ++I + + 
Sbjct: 154 VLDEADRMLDMGFIHDIRRVLTKLPAKRQNLLFSATFSDDIKALAEKLLHNPLEIEV-AR 212

Query: 639 QLSANHNILQIVDVCQEHEKENKLNVLL 722
           + +A+  + Q V    +  K   L+ ++
Sbjct: 213 RNTASDQVTQHVHFVDKKRKRELLSHMI 240


>UniRef50_Q5FUQ9 Cluster: ATP-dependent RNA helicase; n=11; cellular
           organisms|Rep: ATP-dependent RNA helicase -
           Gluconobacter oxydans (Gluconobacter suboxydans)
          Length = 793

 Score =  144 bits (350), Expect = 4e-33
 Identities = 83/205 (40%), Positives = 121/205 (59%)
 Frame = +3

Query: 111 QGKNLVGVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVASE 290
           +G +++GVAQTG+GKT ++ LP +  +       R   P +L+L PTRELA Q+ +    
Sbjct: 327 KGHDVLGVAQTGTGKTASFTLPMLQKLAGSRA--RARMPRSLILEPTRELALQVAENFKL 384

Query: 291 FGNSSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDE 470
           +G    + +  + GG    EQ   L RGV+++IATPGRL+D   +G   L + + LV+DE
Sbjct: 385 YGKYLRLTHALLIGGESMAEQRDVLNRGVDVLIATPGRLLDLFGRGGLLLTQTSTLVIDE 444

Query: 471 ADRMLDMGFEPQIRKIIDQIRPDRQTLMWSATWPKEVRKLAEDYLXDYVQINIGSLQLSA 650
           ADRMLDMGF P I KI+  +   RQTL +SAT   E+R+LA+ +L   V+I + S Q S 
Sbjct: 445 ADRMLDMGFIPDIEKIVALLPAHRQTLFFSATMAPEIRRLADAFLRHPVEITV-SRQSSV 503

Query: 651 NHNILQIVDVCQEHEKENKLNVLLQ 725
              I + + +  E EK   L  LL+
Sbjct: 504 ATTIEEALVIVPEDEKRRTLKKLLR 528


>UniRef50_Q7MT81 Cluster: ATP-dependent RNA helicase, DEAD/DEAH box
           family; n=9; Bacteroidales|Rep: ATP-dependent RNA
           helicase, DEAD/DEAH box family - Porphyromonas
           gingivalis (Bacteroides gingivalis)
          Length = 427

 Score =  144 bits (349), Expect = 5e-33
 Identities = 83/211 (39%), Positives = 121/211 (57%), Gaps = 3/211 (1%)
 Frame = +3

Query: 105 LCQGKNLVGVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVA 284
           + +G++++  AQTG+GKT AY+LP +  ++        D   A+++APTRELAQQI Q  
Sbjct: 35  ILEGRDVIACAQTGTGKTAAYLLPILDRLSAGE--FASDVVNAVIMAPTRELAQQIDQQV 92

Query: 285 SEFGNSSYVRNTCVFGGAPK---REQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTY 455
             F     V    ++GG       +Q R +  G +IVIATPGRLI  L  G+ +L   +Y
Sbjct: 93  EGFSYFMPVSAVAIYGGTDGVAWEQQRRGMAMGADIVIATPGRLISHLNLGSADLSHVSY 152

Query: 456 LVLDEADRMLDMGFEPQIRKIIDQIRPDRQTLMWSATWPKEVRKLAEDYLXDYVQINIGS 635
            VLDEADRMLDMGF   I +I  Q+    QT+M+SAT P ++RKLA   L D +++ I  
Sbjct: 153 FVLDEADRMLDMGFFDDIMQIYKQLPSSCQTVMFSATMPPKIRKLAASILRDPIEVEIAI 212

Query: 636 LQLSANHNILQIVDVCQEHEKENKLNVLLQE 728
            +     +I+Q   +C E +K   L  L ++
Sbjct: 213 SR--PPESIMQSAYICHEAQKLPILRKLFEQ 241


>UniRef50_A3EUK2 Cluster: Superfamily II DNA and RNA helicase; n=1;
           Leptospirillum sp. Group II UBA|Rep: Superfamily II DNA
           and RNA helicase - Leptospirillum sp. Group II UBA
          Length = 444

 Score =  144 bits (349), Expect = 5e-33
 Identities = 98/299 (32%), Positives = 155/299 (51%), Gaps = 7/299 (2%)
 Frame = +3

Query: 114 GKNLVGVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVASEF 293
           G++L+G+AQTG+GKT  ++LP +  I      R G    ALVL+PTRELA QI Q A ++
Sbjct: 38  GRDLLGIAQTGTGKTGGFLLPVLHKIAEGR--RHGIRNRALVLSPTRELATQIHQAAKDY 95

Query: 294 GNSSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEA 473
               +     + GG     Q R+L+R  +IV+ATPGRL+D + +    L   + +++DEA
Sbjct: 96  AKYLHTNAVLLVGGVDFIRQERNLKRNWDIVVATPGRLLDHVRRNNLTLANTSLVIIDEA 155

Query: 474 DRMLDMGFEPQIRKIIDQIRPDRQTLMWSATWPKEVRKLAEDYLXDYVQINIGSLQLSAN 653
           DRMLDMGF P I  I+ Q+   RQ+L++SAT P  +++LA  +  D V + +   +  ++
Sbjct: 156 DRMLDMGFLPDINTIVRQLPKGRQSLLFSATCPPRIQELAATFQNDAVIVRVEPERKGSD 215

Query: 654 HNILQIVDVCQEHEKENKLNVLLQEIGQNQDPGARPLYLLKLKEKRXTXPEISDDMDGQL 833
           H   + + V   H  + KL +L + + + +    + +   + K         ++D+   L
Sbjct: 216 HIHQEWITV--SHGSQ-KLGLLKKVLDEGKSETGQVIIFTRTKRS-------AEDLSIAL 265

Query: 834 CACTXTNTARKG*SXXPILKRVVS-------SILVATDVGCXRS*CGMGSNFXINFDXP 989
                 + A  G    P+  RV+S        +LVATDV   R     G    IN+D P
Sbjct: 266 NDAGYPSDALHGDKSQPVRNRVLSRFRRGDLKVLVATDVAA-RGLDIDGITHVINYDLP 323


>UniRef50_A0C369 Cluster: Chromosome undetermined scaffold_146,
           whole genome shotgun sequence; n=2; Paramecium
           tetraurelia|Rep: Chromosome undetermined scaffold_146,
           whole genome shotgun sequence - Paramecium tetraurelia
          Length = 566

 Score =  144 bits (349), Expect = 5e-33
 Identities = 76/208 (36%), Positives = 122/208 (58%), Gaps = 9/208 (4%)
 Frame = +3

Query: 102 SLCQGKNLVGVAQTGSGKTLAYILPAIVHINNQP---PIRRGDGPIALVLAPTRELA--- 263
           ++  G++++GVA +G GKTL ++LPA++    +    P+ RG+GP AL+L P+ ELA   
Sbjct: 150 AVLMGRDIIGVAPSGQGKTLVFLLPALLQCIEEEMKMPVIRGEGPFALILLPSHELAILT 209

Query: 264 -QQIQQVASEFGNSSYVRNTCVFG--GAPKREQARDLERGVEIVIATPGRLIDFLEKGTT 434
            +  +Q   +F    +    C+ G  G     Q + +  GV IVI TPGR+ D + K   
Sbjct: 210 YELAKQYCQKFQKKGFPAIHCLLGIGGMDMSSQLQSIRNGVHIVIGTPGRISDMVNKKKI 269

Query: 435 NLQRCTYLVLDEADRMLDMGFEPQIRKIIDQIRPDRQTLMWSATWPKEVRKLAEDYLXDY 614
           N+  C ++VLDEADRMLD  FE +IR I++     RQT+++SAT PK++++  +  L D 
Sbjct: 270 NMDLCRFIVLDEADRMLDQVFELEIRNILEHFTGPRQTMLFSATLPKKIQEFTKQTLVDP 329

Query: 615 VQINIGSLQLSANHNILQIVDVCQEHEK 698
           + IN+G      N N++Q +   ++ EK
Sbjct: 330 LVINVGR-SGQINLNVIQEILYVKQEEK 356


>UniRef50_Q18W60 Cluster: DEAD/DEAH box helicase-like; n=2;
           Desulfitobacterium hafniense|Rep: DEAD/DEAH box
           helicase-like - Desulfitobacterium hafniense (strain
           DCB-2)
          Length = 425

 Score =  144 bits (348), Expect = 7e-33
 Identities = 73/174 (41%), Positives = 112/174 (64%), Gaps = 1/174 (0%)
 Frame = +3

Query: 105 LCQGKNLVGVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPI-ALVLAPTRELAQQIQQV 281
           L +G +L+G AQTG+GKT A+ +P +  +     + +G   I ALVLAPTRELA QI + 
Sbjct: 35  LLEGLDLLGCAQTGTGKTAAFAIPILQSLAMGQGLLKGKRQIRALVLAPTRELATQIAES 94

Query: 282 ASEFGNSSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLV 461
            + +G +  +R   +FGG  +  Q R LE+G++I++ATPGRL+D + +G  +L    + V
Sbjct: 95  FTAYGVNLPLRTLVIFGGVGQAPQTRKLEKGIDILVATPGRLLDLINQGFIDLSHVEHFV 154

Query: 462 LDEADRMLDMGFEPQIRKIIDQIRPDRQTLMWSATWPKEVRKLAEDYLXDYVQI 623
           LDE D+MLDMG    +++II  +  +RQ +++SAT P E+ KLA+  L   V+I
Sbjct: 155 LDETDQMLDMGMLHDVKRIITYLPRERQNMLFSATMPVEIEKLADTILKGPVKI 208


>UniRef50_O07897 Cluster: Heat resistant RNA dependent ATPase; n=3;
           Thermus thermophilus|Rep: Heat resistant RNA dependent
           ATPase - Thermus thermophilus
          Length = 510

 Score =  144 bits (348), Expect = 7e-33
 Identities = 79/174 (45%), Positives = 109/174 (62%), Gaps = 1/174 (0%)
 Frame = +3

Query: 111 QGKNLVGVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVASE 290
           +GK+L+G A+TG+GKTLA+ LP    +   P   RG  P ALVL PTRELA Q   VASE
Sbjct: 37  EGKDLIGQARTGTGKTLAFALPIAERL--APSQERGRKPRALVLTPTRELALQ---VASE 91

Query: 291 F-GNSSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLD 467
               + +++   V+GG    +Q   L RG + V+ATPGR +D+L +G  +L R    VLD
Sbjct: 92  LTAVAPHLKVVAVYGGTGYGKQKEALLRGADAVVATPGRALDYLRQGVLDLSRVEVAVLD 151

Query: 468 EADRMLDMGFEPQIRKIIDQIRPDRQTLMWSATWPKEVRKLAEDYLXDYVQINI 629
           EAD ML MGFE ++  ++    P RQTL++SAT P   ++LAE Y+ + V IN+
Sbjct: 152 EADEMLSMGFEEEVEALLSATPPSRQTLLFSATLPSWAKRLAERYMKNPVLINV 205


>UniRef50_Q4W7T7 Cluster: VASA RNA helicase; n=3; Daphniidae|Rep: VASA
            RNA helicase - Moina macrocopa
          Length = 843

 Score =  144 bits (348), Expect = 7e-33
 Identities = 81/217 (37%), Positives = 127/217 (58%), Gaps = 8/217 (3%)
 Frame = +3

Query: 117  KNLVGVAQTGSGKTLAYILPAI-VHINNQ---PPIRRGDGPIALVLAPTRELAQQIQQVA 284
            ++L+  A TGSGKT A+++P + + +  Q    P      P  ++++PTRELA QI + A
Sbjct: 447  RDLIASAVTGSGKTAAFLVPVVNILLEKQVQGAPSGEVQKPEVVIISPTRELAIQIHREA 506

Query: 285  SEFGNSSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVL 464
             +F ++S +++  V+GG     Q   L  G  I++ TPGRL DF++KG  +     + +L
Sbjct: 507  RKFSHNSVLKSVIVYGGTQVSHQKSSLMNGCNILVGTPGRLKDFVDKGFIDFSNVQFFIL 566

Query: 465  DEADRMLDMGFEPQIRKIIDQ--IRP--DRQTLMWSATWPKEVRKLAEDYLXDYVQINIG 632
            DEADRMLDMGF   I  I     + P   R TLM+SAT+P +V+K+A  YL DYV +  G
Sbjct: 567  DEADRMLDMGFGSDIEFIAQHPTMTPVGRRVTLMFSATFPDDVQKIAGKYLHDYVFVTTG 626

Query: 633  SLQLSANHNILQIVDVCQEHEKENKLNVLLQEIGQNQ 743
            ++    N ++ Q     Q  +K NKL  +L+++G ++
Sbjct: 627  NIG-GMNPDVCQEFHEVQRQDKRNKLVEILRDLGNSR 662


>UniRef50_A0RUV7 Cluster: Superfamily II helicase; n=3;
           Thermoprotei|Rep: Superfamily II helicase - Cenarchaeum
           symbiosum
          Length = 434

 Score =  144 bits (348), Expect = 7e-33
 Identities = 86/214 (40%), Positives = 130/214 (60%), Gaps = 1/214 (0%)
 Frame = +3

Query: 105 LCQGKNLVGVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVA 284
           L  G+++VG A TG+GKT AY +  +  I      + G G   L++APTRELA QI +  
Sbjct: 36  LLTGRDVVGQAHTGTGKTGAYSISMLQEI------KEGGGIQGLIVAPTRELAVQITEEV 89

Query: 285 SEFGNSSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVL 464
            +F   + VR   ++GG     Q   L+RG EI++ATPGRLID +++G+ ++ R T+LVL
Sbjct: 90  KKFAKYTKVRPVAIYGGQSMGVQLDALKRGAEILVATPGRLIDHIKRGSISIDRVTHLVL 149

Query: 465 DEADRMLDMGFEPQIRKIIDQIRPDRQTL-MWSATWPKEVRKLAEDYLXDYVQINIGSLQ 641
           DEAD MLDMGF   I+ I+D + PD + + ++SAT P E+ +L+E+YL +  Q  + +  
Sbjct: 150 DEADTMLDMGFIDDIQFILD-LTPDEKVMSLFSATMPIEILRLSEEYLKNPKQFLLDADD 208

Query: 642 LSANHNILQIVDVCQEHEKENKLNVLLQEIGQNQ 743
           LS    I Q   V ++ EK + L   ++E G+ Q
Sbjct: 209 LS-GEGIDQSYLVIRDREKMDYLVDFIKENGKGQ 241


>UniRef50_Q9LUW5 Cluster: DEAD-box ATP-dependent RNA helicase 53;
           n=14; Magnoliophyta|Rep: DEAD-box ATP-dependent RNA
           helicase 53 - Arabidopsis thaliana (Mouse-ear cress)
          Length = 616

 Score =  144 bits (348), Expect = 7e-33
 Identities = 71/175 (40%), Positives = 117/175 (66%), Gaps = 2/175 (1%)
 Frame = +3

Query: 111 QGKNLVGVAQTGSGKTLAYILPAIVHI-NNQPPIRRGDGPIALVLAPTRELAQQIQQVAS 287
           +G++++G A+TG+GKTLA+ +P I  I        RG  P+ LVLAPTRELA+Q+++   
Sbjct: 140 EGRDMIGRARTGTGKTLAFGIPIIDKIIKYNAKHGRGRNPLCLVLAPTRELARQVEK--- 196

Query: 288 EFGNSSYVRNT-CVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVL 464
           EF  S+   +T C++GG P  +Q R L+ GV++ + TPGR+ID +++G  NL    ++VL
Sbjct: 197 EFRESAPSLDTICLYGGTPIGQQMRQLDYGVDVAVGTPGRVIDLMKRGALNLSEVQFVVL 256

Query: 465 DEADRMLDMGFEPQIRKIIDQIRPDRQTLMWSATWPKEVRKLAEDYLXDYVQINI 629
           DEAD+ML +GF   +  I++++   RQ++M+SAT P  +R L + YL + + +++
Sbjct: 257 DEADQMLQVGFAEDVEIILEKLPEKRQSMMFSATMPSWIRSLTKKYLNNPLTVDL 311


>UniRef50_Q6C024 Cluster: Pre-mRNA-splicing ATP-dependent RNA
           helicase PRP28; n=1; Yarrowia lipolytica|Rep:
           Pre-mRNA-splicing ATP-dependent RNA helicase PRP28 -
           Yarrowia lipolytica (Candida lipolytica)
          Length = 575

 Score =  144 bits (348), Expect = 7e-33
 Identities = 91/248 (36%), Positives = 141/248 (56%), Gaps = 23/248 (9%)
 Frame = +3

Query: 117 KNLVGVAQTGSGKTLAYILPAIVHINNQPPI---RRGDGPIALVLAPTRELAQQIQQVAS 287
           ++++GVA+TGSGKT ++++P I +I   P +    + +GP  L+LAPTRELA QI+  A 
Sbjct: 201 RDVIGVAETGSGKTASFLIPLISYICELPKLDERSKVNGPYGLILAPTRELAMQIKDEAV 260

Query: 288 EFGNSSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLD 467
           +F      +   V GG   +EQA  ++ G E+++ATPGRL+D +++    L +C Y+V+D
Sbjct: 261 KFCAPLGFKVVSVVGGYSAQEQALAVQEGAELIVATPGRLLDVIDRRLLVLNQCCYVVMD 320

Query: 468 EADRMLDMGFEPQIRKIIDQI-----RPD---------------RQTLMWSATWPKEVRK 587
           EADRM+DMGFE Q++K++  +     +PD               RQT+M++AT P  + K
Sbjct: 321 EADRMVDMGFEEQVQKVLASLPSSNAKPDSDEAENLAAVSTRRYRQTMMYTATMPVAIEK 380

Query: 588 LAEDYLXDYVQINIGSLQLSANHNILQIVDVCQEHEKENKLNVLLQEIGQNQDPGARPLY 767
           LA+ YL     + IGS    A   + Q+V+     EK  +   LL  I + Q    RP  
Sbjct: 381 LAKKYLRRPGIVTIGSAG-QAGSTVTQLVEFLNTDEKRKRR--LLDIISKRQ---YRPPI 434

Query: 768 LLKLKEKR 791
           ++ L  KR
Sbjct: 435 VVFLNYKR 442


>UniRef50_Q8YXJ0 Cluster: ATP-dependent RNA helicase; n=11;
           Cyanobacteria|Rep: ATP-dependent RNA helicase - Anabaena
           sp. (strain PCC 7120)
          Length = 513

 Score =  143 bits (347), Expect = 9e-33
 Identities = 81/215 (37%), Positives = 121/215 (56%)
 Frame = +3

Query: 105 LCQGKNLVGVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVA 284
           L  G+++VG +QTG+GKT A+ LP +  ++ Q    +     A+VL PTRELA Q+    
Sbjct: 37  LLSGRDVVGQSQTGTGKTAAFSLPILERLDPQQKAVQ-----AIVLTPTRELAIQVHDAM 91

Query: 285 SEFGNSSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVL 464
           ++F  +S +R   ++GG     Q   L+RGV IV+ TPGR+ID LE+G   L +  + VL
Sbjct: 92  AQFVGNSGLRTLAIYGGQSIDRQMLQLKRGVHIVVGTPGRVIDLLERGNLKLDQVKWFVL 151

Query: 465 DEADRMLDMGFEPQIRKIIDQIRPDRQTLMWSATWPKEVRKLAEDYLXDYVQINIGSLQL 644
           DEAD ML MGF   + KI+ Q   DRQT ++SAT P  +R L   +L   V + +   + 
Sbjct: 152 DEADEMLSMGFIDDVEKILSQAPQDRQTALFSATMPPSIRMLVNKFLRSPVTVTVEQPKA 211

Query: 645 SANHNILQIVDVCQEHEKENKLNVLLQEIGQNQDP 749
           + N  I Q+  +   H  + +    LQ I + +DP
Sbjct: 212 TPN-KINQVAYLIPRHWTKAR---ALQPILEMEDP 242


>UniRef50_Q6APU7 Cluster: Related to ATP-dependent RNA helicase; n=1;
            Desulfotalea psychrophila|Rep: Related to ATP-dependent
            RNA helicase - Desulfotalea psychrophila
          Length = 498

 Score =  143 bits (347), Expect = 9e-33
 Identities = 103/304 (33%), Positives = 155/304 (50%), Gaps = 4/304 (1%)
 Frame = +3

Query: 99   QSLCQGKNLVGVAQTGSGKTLAYILPAIVHINNQPPIRRGDG-PIALVLAPTRELAQQIQ 275
            +++  GK+L+G A TG+GKT  +++  +  +        G   P AL+LAPTREL  QI 
Sbjct: 126  EAVLAGKDLIGKANTGTGKTAVFLVGVMARLLADKKGGLGKRTPRALILAPTRELVMQIV 185

Query: 276  QVASEFGNSSYVRNTCVFGGAPKREQARDLERG-VEIVIATPGRLIDFLEKGTTNLQRCT 452
            + A + G  + V    V+GGA   +Q   L+RG  +IV+ATPGRLIDF  K   N   C 
Sbjct: 186  KDAKKLGRYTGVNADAVYGGAEYEKQMELLKRGKTDIVVATPGRLIDFHNKRLVNFDNCQ 245

Query: 453  YLVLDEADRMLDMGFEPQIRKIIDQI--RPDRQTLMWSATWPKEVRKLAEDYLXDYVQIN 626
             LV+DEADRMLDMGF P +R+I+  +  + DRQTLM+SAT   +V  L+  +  D   + 
Sbjct: 246  TLVIDEADRMLDMGFIPDVRRIVSWMPKKRDRQTLMFSATISSDVNNLSAQWCVDPEVVE 305

Query: 627  IGSLQLSANHNILQIVDVCQEHEKENKLNVLLQEIGQNQDPGARPLYLLKLKEKRXTXPE 806
              + Q++ +  + Q V +      E K NVL   I +N D        +K + ++     
Sbjct: 306  AEADQVTTD-TVEQKVYLV---TAEEKYNVLYNLIKENSDERIMIFANMKSETRKLADRL 361

Query: 807  ISDDMDGQLCACTXTNTARKG*SXXPILKRVVSSILVATDVGCXRS*CGMGSNFXINFDX 986
              + +D  L +       R+  S     +     +LVATDV   R     G ++ +N+  
Sbjct: 362  KRNSIDCLLLSGDVPQNKRQ--SRLESFRTGKVKVLVATDV-AGRGIHIDGISYVVNYTL 418

Query: 987  PXXP 998
            P  P
Sbjct: 419  PYEP 422


>UniRef50_A4V6K8 Cluster: Putative RNA helicase protein; n=1;
           Dugesia japonica|Rep: Putative RNA helicase protein -
           Dugesia japonica (Planarian)
          Length = 515

 Score =  143 bits (347), Expect = 9e-33
 Identities = 81/184 (44%), Positives = 113/184 (61%), Gaps = 13/184 (7%)
 Frame = +3

Query: 120 NLVGVAQTGSGKTLAYILPAIVHINNQPP------IRRGDG----PIALVLAPTRELAQQ 269
           +++G A+TGSGKT+AY+ P + +I    P      +++ D     P+ LVLAPTREL  Q
Sbjct: 133 DILGSAETGSGKTIAYLAPLLNNIMKHYPEEMMNELKQNDEELQYPLLLVLAPTRELVNQ 192

Query: 270 IQQVASEFGNSSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRC 449
           I  VA      +++R+  V GG   R Q  D  RG   +IATPGRL D  ++G  +L+ C
Sbjct: 193 ITSVAKTLLKLTHLRSVSVIGGVDARSQINDASRGCHALIATPGRLKDLTDRGIFSLKYC 252

Query: 450 TYLVLDEADRMLDMGFEPQIRKIIDQIR--PDRQTLMWSATWPKEVRKLAEDYL-XDYVQ 620
             LV+DEADRMLDMGFEPQIR+II+ +     R T M+SAT+PK V  LA   +  ++ +
Sbjct: 253 NKLVIDEADRMLDMGFEPQIREIINNLPSVSKRHTSMFSATFPKSVMSLASKLMKPNFGE 312

Query: 621 INIG 632
           I +G
Sbjct: 313 ITVG 316


>UniRef50_Q0HYG8 Cluster: DEAD/DEAH box helicase domain protein;
           n=62; Proteobacteria|Rep: DEAD/DEAH box helicase domain
           protein - Shewanella sp. (strain MR-7)
          Length = 549

 Score =  143 bits (346), Expect = 1e-32
 Identities = 77/205 (37%), Positives = 122/205 (59%)
 Frame = +3

Query: 114 GKNLVGVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVASEF 293
           GK+++  AQTG+GKT  + LP +  ++     + G    ALVL PTRELA Q+ +    +
Sbjct: 38  GKDVMAAAQTGTGKTAGFTLPLLELLSKGNKAKAGQIR-ALVLTPTRELAAQVSESVETY 96

Query: 294 GNSSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEA 473
           G    +R+  VFGG P   Q + L  GV++++ATPGRL+D +++      +   LVLDEA
Sbjct: 97  GKYLPLRSAVVFGGVPINPQIQKLRHGVDVLVATPGRLLDLVQQNVVKFNQLEILVLDEA 156

Query: 474 DRMLDMGFEPQIRKIIDQIRPDRQTLMWSATWPKEVRKLAEDYLXDYVQINIGSLQLSAN 653
           DRMLDMGF   I+KI+  +   RQ LM+SAT+  E+R+LA+  +   V+I++     +AN
Sbjct: 157 DRMLDMGFIRDIKKILALLPAKRQNLMFSATFSDEIRELAKGLVNQPVEISVTPRNAAAN 216

Query: 654 HNILQIVDVCQEHEKENKLNVLLQE 728
             + Q +    +++K   L  L+++
Sbjct: 217 -TVKQWICPVDKNQKSALLIQLIKQ 240


>UniRef50_Q3SF48 Cluster: DEAD/DEAH box helicase; n=6; cellular
           organisms|Rep: DEAD/DEAH box helicase - Thiobacillus
           denitrificans (strain ATCC 25259)
          Length = 533

 Score =  142 bits (345), Expect = 2e-32
 Identities = 104/296 (35%), Positives = 154/296 (52%), Gaps = 4/296 (1%)
 Frame = +3

Query: 114 GKNLVGVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVASEF 293
           G +L+  + TGSGKT A++LP+I  +  +P ++   GP  LVL PTRELA Q+++ A  +
Sbjct: 38  GGDLLVSSHTGSGKTAAFLLPSIQRLLAEPAVK-SIGPRVLVLTPTRELALQVEKAAMTY 96

Query: 294 GNSSY-VRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDE 470
           G      R  C+ GGAP   Q + L + V++V+ATPGRLID LE+G  +  R   LVLDE
Sbjct: 97  GKEMRRFRTACLVGGAPYGLQLKRLSQPVDVVVATPGRLIDHLERGKIDFSRLEVLVLDE 156

Query: 471 ADRMLDMGFEPQIRKIIDQIRPDRQTLMWSATWPKEVRKLAEDYLXDYVQINIGSLQLSA 650
           ADRMLDMGF   I+ I  +   +RQTL++SAT    V  LA +   D  +I I ++    
Sbjct: 157 ADRMLDMGFVDDIKAIAARCPAERQTLLFSATLDGVVGNLARELTRDAQRIEIEAVPHKE 216

Query: 651 NHNILQIVDVCQEHEKENKLNVLLQEIGQNQDPGARPLYLLKLKEKRXTXPEISDDM-DG 827
                +++       K   L+ LL+++   Q        ++    KR T  EISD + + 
Sbjct: 217 AKIEQRLLFADNMDHKNRLLDALLRDVEMVQ-------AIVFASTKRST-EEISDLLAES 268

Query: 828 QLCACTXTNTARKG*SXXPI--LKRVVSSILVATDVGCXRS*CGMGSNFXINFDXP 989
              +       ++G     +  L+   + +LVATDV   R       +  INFD P
Sbjct: 269 GFASDALHGDMQQGQRNRALQRLREGRTRVLVATDVAA-RGIDVASISHVINFDLP 323


>UniRef50_Q1J0S9 Cluster: DEAD/DEAH box helicase-like protein; n=2;
           Deinococcus|Rep: DEAD/DEAH box helicase-like protein -
           Deinococcus geothermalis (strain DSM 11300)
          Length = 591

 Score =  142 bits (345), Expect = 2e-32
 Identities = 81/176 (46%), Positives = 111/176 (63%), Gaps = 4/176 (2%)
 Frame = +3

Query: 114 GKNLVGVAQTGSGKTLAYILPAIVHI---NNQPPIRRGDGPIALVLAPTRELAQQIQQVA 284
           GK+L+G A+TG+GKTLA+ LP I ++   + +    RG  P A+V+APTRELA+Q   VA
Sbjct: 37  GKDLIGRARTGTGKTLAFALPIIQNLTAPDGRGSRERGRLPRAIVIAPTRELAKQ---VA 93

Query: 285 SEFGNSSYVRNTC-VFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLV 461
            EF  S    +T  V+GGA    Q   L RGV++V+ TPGRLID LE+G  +L    Y V
Sbjct: 94  EEFSKSGPQLSTVTVYGGAAYGPQENALRRGVDVVVGTPGRLIDHLERGNLDLSAIQYAV 153

Query: 462 LDEADRMLDMGFEPQIRKIIDQIRPDRQTLMWSATWPKEVRKLAEDYLXDYVQINI 629
           LDEAD ML +GF   I  I+ Q    RQT+++SAT   E+ +LA  YL + V +++
Sbjct: 154 LDEADEMLSVGFADAIETILQQTPAARQTMLFSATLNDEIHRLARKYLREPVVVDL 209


>UniRef50_A6GPV2 Cluster: Helicase; n=1; Limnobacter sp. MED105|Rep:
           Helicase - Limnobacter sp. MED105
          Length = 539

 Score =  142 bits (345), Expect = 2e-32
 Identities = 79/200 (39%), Positives = 122/200 (61%), Gaps = 6/200 (3%)
 Frame = +3

Query: 114 GKNLVGVAQTGSGKTLAYILPAIVHI-----NNQPPIRRGDGPI-ALVLAPTRELAQQIQ 275
           G +++G AQTG+GKT  + LP +  +      N  P R    P+ AL+L PTRELA Q+ 
Sbjct: 57  GVDVMGAAQTGTGKTAGFSLPILNRLMPLATENTSPARH---PVRALILTPTRELADQVA 113

Query: 276 QVASEFGNSSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTY 455
                +   + +R+T V+GG     Q + L RGVE+VIATPGRL+D +++ + NL +   
Sbjct: 114 ANVHTYAKFTPLRSTVVYGGVDINPQIQTLRRGVELVIATPGRLLDHVQQKSINLGQVQV 173

Query: 456 LVLDEADRMLDMGFEPQIRKIIDQIRPDRQTLMWSATWPKEVRKLAEDYLXDYVQINIGS 635
           LVLDEADRMLDMGF P +++II+ +   RQ L++SAT+  E++KLA+ ++     I + +
Sbjct: 174 LVLDEADRMLDMGFLPDLQRIINLLPKTRQNLLFSATFSPEIQKLAKSFMVSPTLIEV-A 232

Query: 636 LQLSANHNILQIVDVCQEHE 695
            + + + NI Q++      E
Sbjct: 233 RRNATSENIKQVIFALDSEE 252


>UniRef50_Q8F0Q7 Cluster: ATP-dependent RNA helicase; n=4;
           Leptospira|Rep: ATP-dependent RNA helicase - Leptospira
           interrogans
          Length = 540

 Score =  142 bits (344), Expect = 2e-32
 Identities = 81/213 (38%), Positives = 130/213 (61%), Gaps = 2/213 (0%)
 Frame = +3

Query: 111 QGKNLVGVAQTGSGKTLAYILPAIVHINNQPPIRRG-DGPIALVLAPTRELAQQIQQVAS 287
           +GK++ G+AQTG+GKT+A+++P I +I     + +G  G  ALVLAPTREL  QI + A 
Sbjct: 37  EGKDITGLAQTGTGKTVAFLIPVIHNI-----LTKGIQGIAALVLAPTRELTMQIAEEAK 91

Query: 288 EF-GNSSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVL 464
           +   +S  +R+  + GG   + Q +DLE    I++ATPGRLID ++ G+ ++    + VL
Sbjct: 92  KLLKHSEGIRSVPIIGGTDYKSQNKDLEGLNGIIVATPGRLIDMIKSGSIDISNVEFFVL 151

Query: 465 DEADRMLDMGFEPQIRKIIDQIRPDRQTLMWSATWPKEVRKLAEDYLXDYVQINIGSLQL 644
           DEADRMLDMGF   IR ++ + +  +QTL++SAT   EV +LA  +L + V+I I   ++
Sbjct: 152 DEADRMLDMGFIQDIRWLLHKCKNRKQTLLYSATLSVEVMRLAYRFLNEPVEIQINPEKI 211

Query: 645 SANHNILQIVDVCQEHEKENKLNVLLQEIGQNQ 743
                  +IV + +E +     N+++    + Q
Sbjct: 212 ITERIDQKIVHLGREEKIPYMTNLIINSKEEGQ 244


>UniRef50_A7HKQ8 Cluster: DEAD/DEAH box helicase domain protein;
           n=1; Fervidobacterium nodosum Rt17-B1|Rep: DEAD/DEAH box
           helicase domain protein - Fervidobacterium nodosum
           Rt17-B1
          Length = 571

 Score =  142 bits (343), Expect = 3e-32
 Identities = 79/215 (36%), Positives = 129/215 (60%)
 Frame = +3

Query: 102 SLCQGKNLVGVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQV 281
           +L   K+L+  AQTG+GKT A+ +P +  I+     +      A+++ PTRELA QI + 
Sbjct: 52  ALSTDKDLIAQAQTGTGKTAAFGIPLLERID----FKANKFVKAIIVTPTRELALQIFEE 107

Query: 282 ASEFGNSSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLV 461
                 +  V+ T ++GG    +Q +DLE+GV+IV+ TPGR+ID L + T +L    YLV
Sbjct: 108 LKSLKGTKRVKITTLYGGQSLEKQFKDLEKGVDIVVGTPGRIIDHLNRDTLDLSHVEYLV 167

Query: 462 LDEADRMLDMGFEPQIRKIIDQIRPDRQTLMWSATWPKEVRKLAEDYLXDYVQINIGSLQ 641
           LDEADRMLDMGF   + +II +   +++T ++SAT PKE+  +A  ++ +Y+ ++    +
Sbjct: 168 LDEADRMLDMGFLDDVLEIIKRTGENKRTFLFSATMPKEIVDIARKFMKEYIHVSTVKDE 227

Query: 642 LSANHNILQIVDVCQEHEKENKLNVLLQEIGQNQD 746
           L+   N  Q+     E ++++KL +L + I  N D
Sbjct: 228 LT-TENAEQLY---FEVDEKDKLPLLCRIIDMNPD 258


>UniRef50_Q240I5 Cluster: DEAD/DEAH box helicase family protein; n=2;
            Oligohymenophorea|Rep: DEAD/DEAH box helicase family
            protein - Tetrahymena thermophila SB210
          Length = 749

 Score =  142 bits (343), Expect = 3e-32
 Identities = 105/321 (32%), Positives = 165/321 (51%), Gaps = 28/321 (8%)
 Frame = +3

Query: 111  QGKNLVGVAQTGSGKTLAYILPAIVHINNQPPIRRG---DGPIALVLAPTRELAQQIQQV 281
            Q K+L+G++QTG+GKT A+++P I ++ + PP+      DGP AL+L PTRELA QI++ 
Sbjct: 359  QRKDLIGISQTGTGKTCAFLIPLITYLRSLPPMDEEIAKDGPYALILIPTRELAPQIEKE 418

Query: 282  ASEFGNSSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLV 461
                 ++  +++  + GG  +  QA  L+ G E++I T GR+ D LEK    L + +++V
Sbjct: 419  FQNLTSNMRMKSLVMVGGKDEGNQAFKLKLGCELLIGTVGRIKDALEKNYLVLDQVSWVV 478

Query: 462  LDEADRMLDMGFEPQIRKIIDQIRPD-----------------------RQTLMWSATWP 572
            LDEAD+M+D+ FE  +  I+D+IR +                       R T ++SAT P
Sbjct: 479  LDEADKMIDLNFEQDVNFILDKIRTNMKSEDENMAVLQEQEAKVGEKIFRVTHLFSATMP 538

Query: 573  KEVRKLAEDYLXDYVQINIGSLQLSANHNILQIVDVCQEHEKENKLNVLLQEIGQNQDPG 752
              + +LA+ YL  +  I+IG     A  +I QIVD   E +K+++L  +L+         
Sbjct: 539  PNLERLAKKYLRSFCYISIGEAG-DAKKDIEQIVDFMSEGQKKSRLQKILET-------- 589

Query: 753  ARPLYLLKLKEKRXT--XPEISDDMDGQLCACTXTNTARKG*SXXPILKRVVSSILVATD 926
            A+P  ++   EK       +I D    Q        T ++  +     K+    ILVATD
Sbjct: 590  AKPPIIIFANEKTAVEKLSKILDRWGWQNVIYHGGKTQQQREAAVDGFKKGKYDILVATD 649

Query: 927  VGCXRS*CGMGSNFXINFDXP 989
            +G  R     G    INFD P
Sbjct: 650  LGA-RGLHVDGVKMVINFDAP 669


>UniRef50_Q6FM43 Cluster: Pre-mRNA-splicing ATP-dependent RNA helicase
            PRP28; n=1; Candida glabrata|Rep: Pre-mRNA-splicing
            ATP-dependent RNA helicase PRP28 - Candida glabrata
            (Yeast) (Torulopsis glabrata)
          Length = 582

 Score =  142 bits (343), Expect = 3e-32
 Identities = 95/284 (33%), Positives = 156/284 (54%), Gaps = 13/284 (4%)
 Frame = +3

Query: 117  KNLVGVAQTGSGKTLAYILPAIVHINNQPP----IRRGDGPIALVLAPTRELAQQIQQ-- 278
            ++++G+A TGSGKTLA+ +P +  ++  P     ++  DGP+ALVL PTRELAQQI Q  
Sbjct: 214  RDILGIASTGSGKTLAFSIPILARLDALPARPVNLKTLDGPLALVLVPTRELAQQISQEI 273

Query: 279  --VASEFGNSSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCT 452
              + S + N   +    + GG    + +  L  G +I+IATPGRL+D L+     L +  
Sbjct: 274  NRLLSAWENKKNLNAVSIVGGHSMSDISHTLRNGCDILIATPGRLLDVLDNHLVVLNKIQ 333

Query: 453  YLVLDEADRMLDMGFEPQIRKIIDQIRPD----RQTLMWSATWPKEVRKLAEDYLXDYVQ 620
             LVLDEADRM+D+GFE Q++ I+  +  D    RQT++++AT    V  +A+ YL + + 
Sbjct: 334  SLVLDEADRMIDLGFEDQMKSILSHLMADELAARQTMLFTATLSSSVESIAKGYLKNPLH 393

Query: 621  INIGSLQLSANHNILQIVDVCQEHEKENKLNVLLQEIGQNQDPGARPLYLLKLKEKRXTX 800
            +++GS   S    I Q+V    + +K  KL+ L  ++ +N   G   +  +  KE     
Sbjct: 394  VSVGSRWDSDKPLITQVVRHTGDDDK--KLSFLKDDLIKN---GLPAIIFINYKETADWL 448

Query: 801  P-EISDDMDGQLCACTXTNTARKG*SXXPILKRVVSSILVATDV 929
               +SD  +      + + + R+  S    LK   +++L+AT+V
Sbjct: 449  TLRLSDRFNIVTLHGSKSQSQRE--SAIQKLKSGTANVLIATNV 490


>UniRef50_A3ZWP8 Cluster: ATP-dependent RNA helicase; n=1;
           Blastopirellula marina DSM 3645|Rep: ATP-dependent RNA
           helicase - Blastopirellula marina DSM 3645
          Length = 428

 Score =  141 bits (342), Expect = 4e-32
 Identities = 71/180 (39%), Positives = 110/180 (61%)
 Frame = +3

Query: 111 QGKNLVGVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVASE 290
           +G++++G A+TG+GKT A+ +P I  + + P  R    P AL+L PTRELA Q++   ++
Sbjct: 40  EGRDVLGQARTGTGKTAAFGIPIIERLEHGPNSRN---PQALILTPTRELAVQVRDEIAK 96

Query: 291 FGNSSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDE 470
             +   +    V+GG P R Q   L+R   IV+ TPGR+ID + +    L+    +VLDE
Sbjct: 97  LTHGQRINVVAVYGGKPLRSQMEKLKRAPHIVVGTPGRVIDLMTRRALQLEMLRTVVLDE 156

Query: 471 ADRMLDMGFEPQIRKIIDQIRPDRQTLMWSATWPKEVRKLAEDYLXDYVQINIGSLQLSA 650
           ADRMLD+GF P I KI+ +   +RQTL+ SAT P  + KLA+ Y+ +  +++     +SA
Sbjct: 157 ADRMLDIGFRPDIEKILRRCPEERQTLLLSATVPPTIEKLAQRYMRNPEKVDFSPTNISA 216


>UniRef50_A0Z0M4 Cluster: ATP-dependent RNA helicase; n=1; marine
           gamma proteobacterium HTCC2080|Rep: ATP-dependent RNA
           helicase - marine gamma proteobacterium HTCC2080
          Length = 582

 Score =  141 bits (342), Expect = 4e-32
 Identities = 81/207 (39%), Positives = 124/207 (59%), Gaps = 1/207 (0%)
 Frame = +3

Query: 105 LCQGKNLVGVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVA 284
           L +G+++VG+AQTG+GKT A+ LP + +I+ +  +R    P ALVL PTRELAQQ+ +  
Sbjct: 43  LLEGRDVVGLAQTGTGKTAAFALPILANIDVK--VR---SPQALVLCPTRELAQQVAEAF 97

Query: 285 SEFGNS-SYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLV 461
             +G     +R   +FGGA  R+Q + L  G  IV+ATPGRL+D +E+ + +L     +V
Sbjct: 98  RSYGRGMGGLRILSIFGGADMRQQLKSLREGTHIVVATPGRLLDHIERRSIDLTGINAVV 157

Query: 462 LDEADRMLDMGFEPQIRKIIDQIRPDRQTLMWSATWPKEVRKLAEDYLXDYVQINIGSLQ 641
           LDEAD ML MGF   +  I+ +   +R+  ++SAT PK VR +A  +L +  +I++ +  
Sbjct: 158 LDEADEMLRMGFIDDVDTILAKTPKERKVALFSATMPKRVRDIANKHLSNPAEISVAA-A 216

Query: 642 LSANHNILQIVDVCQEHEKENKLNVLL 722
            + N NI Q   + +   K   L  LL
Sbjct: 217 ATTNENIEQCYWLAKGASKLEALKRLL 243


>UniRef50_A0KXT6 Cluster: DEAD/DEAH box helicase domain protein;
           n=22; Gammaproteobacteria|Rep: DEAD/DEAH box helicase
           domain protein - Shewanella sp. (strain ANA-3)
          Length = 491

 Score =  141 bits (342), Expect = 4e-32
 Identities = 78/214 (36%), Positives = 127/214 (59%)
 Frame = +3

Query: 102 SLCQGKNLVGVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQV 281
           S+  GKN++  AQTG+GKT +++LP +    + P IR      A++L PTRELA Q+++ 
Sbjct: 34  SILAGKNVLAAAQTGTGKTASFVLPLLHRFADAPKIRP-KRVRAIILTPTRELALQVEEN 92

Query: 282 ASEFGNSSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLV 461
            +++     +    ++GG     Q + L  GV++++ATPGRL+D   +        + LV
Sbjct: 93  INQYAKYLPLTAMAMYGGVDAAPQKKRLIEGVDLLVATPGRLLDMYTQRAIRFDEVSVLV 152

Query: 462 LDEADRMLDMGFEPQIRKIIDQIRPDRQTLMWSATWPKEVRKLAEDYLXDYVQINIGSLQ 641
           LDEADRMLDMGF   I  II+++   RQ L++SAT  K+V+ LA+  + D ++I I S +
Sbjct: 153 LDEADRMLDMGFIEDINSIIEKLPEQRQNLLFSATLSKQVKALAKSAIPDAIEIEI-SRK 211

Query: 642 LSANHNILQIVDVCQEHEKENKLNVLLQEIGQNQ 743
            +A+ +I Q +    + +K   L+ L+QE   +Q
Sbjct: 212 SAASTHIDQWLTTVDKDKKSALLSHLIQEQNWSQ 245


>UniRef50_A0KTC9 Cluster: DEAD/DEAH box helicase domain protein;
           n=132; Bacteria|Rep: DEAD/DEAH box helicase domain
           protein - Shewanella sp. (strain ANA-3)
          Length = 578

 Score =  141 bits (342), Expect = 4e-32
 Identities = 77/205 (37%), Positives = 121/205 (59%)
 Frame = +3

Query: 114 GKNLVGVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVASEF 293
           GK+++  AQTG+GKT  + LP +  ++     + G    ALVL PTRELA Q+ +    +
Sbjct: 38  GKDVMAAAQTGTGKTAGFTLPLLELLSKGNKAKAGQIR-ALVLTPTRELAAQVSESVETY 96

Query: 294 GNSSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEA 473
           G    +R+  VFGG P   Q + L  GV++++ATPGRL+D  ++      +   LVLDEA
Sbjct: 97  GKYLPLRSAVVFGGVPINPQIQKLRHGVDVLVATPGRLLDLEQQKAVKFNQLEVLVLDEA 156

Query: 474 DRMLDMGFEPQIRKIIDQIRPDRQTLMWSATWPKEVRKLAEDYLXDYVQINIGSLQLSAN 653
           DRMLDMGF   I+KI+  +   RQ LM+SAT+  E+R+LA+  +   V+I++     +AN
Sbjct: 157 DRMLDMGFIRDIKKILAMLPAKRQNLMFSATFSDEIRELAKGLVNQPVEISVTPRNAAAN 216

Query: 654 HNILQIVDVCQEHEKENKLNVLLQE 728
             + Q +    +++K   L  L+++
Sbjct: 217 -TVKQWICPVDKNQKSALLIQLIKQ 240


>UniRef50_A3AD37 Cluster: Putative uncharacterized protein; n=2;
           Oryza sativa|Rep: Putative uncharacterized protein -
           Oryza sativa subsp. japonica (Rice)
          Length = 552

 Score =  141 bits (342), Expect = 4e-32
 Identities = 68/159 (42%), Positives = 105/159 (66%), Gaps = 1/159 (0%)
 Frame = +3

Query: 270 IQQVASEFGNSSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRC 449
           I  V  E G    + + C++GG  K  Q   L+ GV+IVI TPGR+ D +E G   L   
Sbjct: 246 IADVLCEAGAPCGISSVCLYGGTSKGPQISALKSGVDIVIGTPGRMKDLIEMGICRLNDV 305

Query: 450 TYLVLDEADRMLDMGFEPQIRKIIDQIRPDRQTLMWSATWPKEVRKLAEDYL-XDYVQIN 626
           +++VLDEADRMLDMGFEP++R I+ Q    RQT+M+SATWP  V +LA++++  + +++ 
Sbjct: 306 SFVVLDEADRMLDMGFEPEVRAILSQTASVRQTVMFSATWPPAVHQLAQEFMDPNPIKVV 365

Query: 627 IGSLQLSANHNILQIVDVCQEHEKENKLNVLLQEIGQNQ 743
           IGS  L+ANH+++QIV+V  +  ++++L  LL +  + Q
Sbjct: 366 IGSEDLAANHDVMQIVEVLDDRSRDSRLVALLDKYHKAQ 404



 Score =  101 bits (243), Expect = 4e-20
 Identities = 51/124 (41%), Positives = 77/124 (62%), Gaps = 3/124 (2%)
 Frame = +3

Query: 105 LCQGKNLVGVAQTGSGKTLAYILPAIVHINN---QPPIRRGDGPIALVLAPTRELAQQIQ 275
           L  G++ +G+A TGSGKT+A+ +PA++H+     +   ++G  P  LVL+PTRELAQQI 
Sbjct: 126 LLDGRDFIGIAATGSGKTIAFGVPALMHVRRKMGEKSAKKGV-PRVLVLSPTRELAQQIA 184

Query: 276 QVASEFGNSSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTY 455
            V  E G    + + C++GG  K  Q   L+ GV+IVI TPGR+ D +E G   L   ++
Sbjct: 185 DVLCEAGAPCGISSVCLYGGTSKGPQISALKSGVDIVIGTPGRMKDLIEMGICRLNDVSF 244

Query: 456 LVLD 467
           ++ D
Sbjct: 245 VIAD 248


>UniRef50_Q012T2 Cluster: DEAD-box protein abstrakt; n=3;
           Ostreococcus|Rep: DEAD-box protein abstrakt -
           Ostreococcus tauri
          Length = 1025

 Score =  141 bits (341), Expect = 5e-32
 Identities = 95/216 (43%), Positives = 125/216 (57%), Gaps = 10/216 (4%)
 Frame = +3

Query: 114 GKNLVGVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVASEF 293
           G ++V VA+TGSGKTLA+      H      +++  G   LV+APTRELA QIQ    +F
Sbjct: 90  GMDVVAVAKTGSGKTLAF------H-----GMKKHGGVEGLVVAPTRELAIQIQAECEKF 138

Query: 294 GNSSYVRNTCVFGGAPKREQARDLERGVE-IVIATPGRLIDFL-EKGTTNLQRCTYLVLD 467
           G      +  V+GGA   EQ   L      IVI TPGRL D + ++G  +L++ + +VLD
Sbjct: 139 GAERGFHSVVVYGGASAYEQKNALRSKKPCIVIGTPGRLTDLMSQEGVLSLEKLSVIVLD 198

Query: 468 EADRMLDMGFEPQIRKIIDQIRPDRQTLMWSATWPKEVRKLAEDYLXD------YVQINI 629
           EADRMLDMGFEPQI+ I       RQTL++SATWPK VRKLA  YL         V I  
Sbjct: 199 EADRMLDMGFEPQIKTIFGATPASRQTLLFSATWPKSVRKLAACYLNQDKSRVREVFIGE 258

Query: 630 GSL--QLSANHNILQIVDVCQEHEKENKLNVLLQEI 731
           G+   +L+AN  I Q     ++HEK+  L  L+ E+
Sbjct: 259 GAQDGELAANKAITQRFVEARDHEKDEHLYNLICEL 294


>UniRef50_Q2BMZ1 Cluster: ATP-dependent RNA helicase; n=1;
           Neptuniibacter caesariensis|Rep: ATP-dependent RNA
           helicase - Neptuniibacter caesariensis
          Length = 417

 Score =  140 bits (340), Expect = 6e-32
 Identities = 71/178 (39%), Positives = 115/178 (64%), Gaps = 2/178 (1%)
 Frame = +3

Query: 102 SLCQGKNLVGVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQV 281
           ++ +G +L+  A+TGSGKT  ++LP +  +++ P     +   ALVL PTRELA Q+ Q 
Sbjct: 34  AVLKGHDLIAAAETGSGKTAGFVLPLLEKLHSIPA-PGNNLTHALVLVPTRELAVQVSQS 92

Query: 282 ASEFGNSS--YVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTY 455
              +  +    +R+  ++GGA    Q + L +G +IV+ATPGRL+D + K   +L+    
Sbjct: 93  VDRYSENCPRKIRSVAIYGGAAINPQMQSLSKGCDIVVATPGRLLDLMRKNALDLRGLKA 152

Query: 456 LVLDEADRMLDMGFEPQIRKIIDQIRPDRQTLMWSATWPKEVRKLAEDYLXDYVQINI 629
           LVLDEADRMLD+GF  ++  I+DQ   + QTL++SAT+P +V++L E+ L + V+I++
Sbjct: 153 LVLDEADRMLDLGFADELDDILDQTPGNVQTLLFSATFPDKVKELTEELLRNPVEISV 210


>UniRef50_Q1IMK6 Cluster: DEAD/DEAH box helicase-like; n=1;
           Acidobacteria bacterium Ellin345|Rep: DEAD/DEAH box
           helicase-like - Acidobacteria bacterium (strain
           Ellin345)
          Length = 423

 Score =  140 bits (340), Expect = 6e-32
 Identities = 76/208 (36%), Positives = 120/208 (57%)
 Frame = +3

Query: 114 GKNLVGVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVASEF 293
           G++++  AQTG+GKTLA+I+PA+  + +  P     G   L+L PTRELA Q+  V  + 
Sbjct: 64  GRDILATAQTGTGKTLAFIIPALEMLRDTEPC----GVQVLILVPTRELAMQVHGVYEQL 119

Query: 294 GNSSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEA 473
                     V GG  +R Q + +  G  +V+ATPGRL D++ +   +L +   LVLDEA
Sbjct: 120 KGKKLKSAALVMGGTSERNQIQSIRSGARVVVATPGRLEDYMGRRLVDLSQVEMLVLDEA 179

Query: 474 DRMLDMGFEPQIRKIIDQIRPDRQTLMWSATWPKEVRKLAEDYLXDYVQINIGSLQLSAN 653
           DRM+DMGF P I++I+  +  D+QTL +SAT    V  + +D L + V++ IGS+   A 
Sbjct: 180 DRMMDMGFLPAIKRILRALPRDKQTLCFSATMGPAVSGIVQDCLYNAVRVEIGSILKPAA 239

Query: 654 HNILQIVDVCQEHEKENKLNVLLQEIGQ 737
              L  ++V    +K+    +L ++ G+
Sbjct: 240 AVELHAIEVPIMGKKDALRQLLYEQEGK 267


>UniRef50_Q0S0C5 Cluster: Possible ATP-dependent RNA helicase; n=6;
           Actinomycetales|Rep: Possible ATP-dependent RNA helicase
           - Rhodococcus sp. (strain RHA1)
          Length = 632

 Score =  140 bits (340), Expect = 6e-32
 Identities = 74/169 (43%), Positives = 101/169 (59%)
 Frame = +3

Query: 114 GKNLVGVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVASEF 293
           G N++G AQTGSGKTLA+ LP +  ++          P ALVL PTRELA Q+    + +
Sbjct: 63  GTNVLGRAQTGSGKTLAFGLPMLTRLSRHEDRPAPKRPRALVLVPTRELAFQVVDSLNSY 122

Query: 294 GNSSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEA 473
             +  +      GG P  +Q   L RGV+I++ATPGRL D L +GT  L       LDEA
Sbjct: 123 AGAMGLTVRPAVGGTPFSKQVDQLRRGVDILVATPGRLNDHLRQGTCILDSIEITALDEA 182

Query: 474 DRMLDMGFEPQIRKIIDQIRPDRQTLMWSATWPKEVRKLAEDYLXDYVQ 620
           D+M DMGF P++R I+ + R D Q L++SAT  +EV+ L   +L D+VQ
Sbjct: 183 DQMADMGFLPEVRAILGETRADGQRLLFSATLDREVQSLVRQFLPDHVQ 231


>UniRef50_A6TTG0 Cluster: DEAD/DEAH box helicase domain protein;
           n=3; Clostridiaceae|Rep: DEAD/DEAH box helicase domain
           protein - Alkaliphilus metalliredigens QYMF
          Length = 549

 Score =  140 bits (340), Expect = 6e-32
 Identities = 79/204 (38%), Positives = 118/204 (57%)
 Frame = +3

Query: 117 KNLVGVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVASEFG 296
           ++++  AQTG+GKTLA+ILP +  +N + P  +     AL++ PTRELA QI     +  
Sbjct: 41  RDVMAQAQTGTGKTLAFILPILERVNVEKPTIQ-----ALIITPTRELAIQITAETKKLA 95

Query: 297 NSSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEAD 476
               +     +GG    +Q R L+  + I+I TPGRL+D L + T NL + + LVLDEAD
Sbjct: 96  EVKGINILAAYGGQDVEQQLRKLKGSIHIIIGTPGRLLDHLRRKTINLGKLSMLVLDEAD 155

Query: 477 RMLDMGFEPQIRKIIDQIRPDRQTLMWSATWPKEVRKLAEDYLXDYVQINIGSLQLSANH 656
           +ML MGF   +  I+  I   RQ + +SAT P +VR LAE Y+ D VQI + S +++ + 
Sbjct: 156 QMLHMGFLRDVEDIMTHIPKRRQNMFFSATMPNQVRTLAEQYMKDPVQIQVQSKRVTLD- 214

Query: 657 NILQIVDVCQEHEKENKLNVLLQE 728
            I Q+V    +  K++ L  L  E
Sbjct: 215 EIRQVVIETTDRGKQDLLCQLFDE 238


>UniRef50_A5FST0 Cluster: DEAD/DEAH box helicase domain protein;
           n=8; Bacteria|Rep: DEAD/DEAH box helicase domain protein
           - Dehalococcoides sp. BAV1
          Length = 561

 Score =  140 bits (340), Expect = 6e-32
 Identities = 81/208 (38%), Positives = 123/208 (59%), Gaps = 2/208 (0%)
 Frame = +3

Query: 114 GKNLVGVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVASEF 293
           G +++G+AQTG+GKT AY LP I  + + P   RG     LV+APTRELA QI       
Sbjct: 38  GHDVIGLAQTGTGKTAAYALPIIQKMLSTP---RGRVR-TLVIAPTRELACQISDSFRSL 93

Query: 294 GNSSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEA 473
           G  + +R   ++GG    +Q R L  GV++V+A PGRL+D + +GT ++     L++DEA
Sbjct: 94  GQRARIRECSIYGGVNMDQQIRRLRSGVDVVVACPGRLLDHIWRGTIDVCGVETLIIDEA 153

Query: 474 DRMLDMGFEPQIRKIIDQIRPDRQTLMWSATWPKEVRKLAEDYLXDYVQINIG--SLQLS 647
           DRM DMGF+P I+ I+  +    QTL++SAT P EVRKL  +   + V + +G  S   S
Sbjct: 154 DRMFDMGFQPDIQSILKCLVQPHQTLLFSATMPPEVRKLTLETQTNPVTVQVGTQSPVSS 213

Query: 648 ANHNILQIVDVCQEHEKENKLNVLLQEI 731
            +H++  +    + H+K   L  +L+ +
Sbjct: 214 VSHSVYPV----KSHQKTPLLLEILKTV 237


>UniRef50_A4EAF2 Cluster: Putative uncharacterized protein; n=1;
            Collinsella aerofaciens ATCC 25986|Rep: Putative
            uncharacterized protein - Collinsella aerofaciens ATCC
            25986
          Length = 749

 Score =  140 bits (340), Expect = 6e-32
 Identities = 101/315 (32%), Positives = 154/315 (48%), Gaps = 19/315 (6%)
 Frame = +3

Query: 111  QGKNLVGVAQTGSGKTLAYILPA---IVHINNQPPIRR----------------GDGPIA 233
            +G++L+  AQTG+GKT A++LP    + HI    P+R                 G GP+ 
Sbjct: 82   EGRDLLAAAQTGTGKTAAFLLPTMNNLEHIAPPKPVRERGGRNRRRGAKKPEGNGRGPVM 141

Query: 234  LVLAPTRELAQQIQQVASEFGNSSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLID 413
            LV+ PTRELAQQI +VA +  + +      V GG   + Q   L+ G +I++ATPGRL+D
Sbjct: 142  LVITPTRELAQQIDEVAGKIADVTGHVAVTVVGGVSYKPQTAALKYGCDILVATPGRLVD 201

Query: 414  FLEKGTTNLQRCTYLVLDEADRMLDMGFEPQIRKIIDQIRPDRQTLMWSATWPKEVRKLA 593
             +E+G  +L     LVLDEADRMLDMGF P +R+I+ +   +RQTL++SAT  +E     
Sbjct: 202  LIEQGACHLDEVKVLVLDEADRMLDMGFLPAVRRIVRETPAERQTLLFSATLDEEAVGEI 261

Query: 594  EDYLXDYVQINIGSLQLSANHNILQIVDVCQEHEKENKLNVLLQEIGQNQDPGARPLYLL 773
             D + D  ++ I     +A+  + Q V       K N    LL E  + + P  R +  +
Sbjct: 262  TDLVSDPARVEIAPATSTAD-TVDQFVFPVSIEAKNN----LLPEFLKKEGP-ERTIVFM 315

Query: 774  KLKEKRXTXPEISDDMDGQLCACTXTNTARKG*SXXPILKRVVSSILVATDVGCXRS*CG 953
            + K +  +     +    +  A     +  +        +     +LVATDV   R    
Sbjct: 316  RTKHRADSCCRRLERKGIKAAAIHGNRSQAQRERALSAFRDGTVDVLVATDV-LARGIDI 374

Query: 954  MGSNFXINFDXPXXP 998
                + +NFD P  P
Sbjct: 375  SDVRYVVNFDVPAEP 389


>UniRef50_A0VLH7 Cluster: DEAD/DEAH box helicase domain protein;
           n=2; Rhodobacteraceae|Rep: DEAD/DEAH box helicase domain
           protein - Dinoroseobacter shibae DFL 12
          Length = 508

 Score =  140 bits (340), Expect = 6e-32
 Identities = 97/298 (32%), Positives = 150/298 (50%), Gaps = 3/298 (1%)
 Frame = +3

Query: 114 GKNLVGVAQTGSGKTLAYILP---AIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVA 284
           G++++G+AQTG+GKT A+ LP   A++    +P  R   G   L+LAPTREL  QI +  
Sbjct: 108 GRDVLGIAQTGTGKTAAFGLPLLDALMKAGTKPAPRTCRG---LILAPTRELVSQICESL 164

Query: 285 SEFGNSSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVL 464
             F   S+++   + GG     Q +  ERG ++++ATPGRLID L++    L    +LVL
Sbjct: 165 RAFTEGSHLKLQVIVGGVAIGPQIKRAERGADLIVATPGRLIDLLDRKALRLSETRFLVL 224

Query: 465 DEADRMLDMGFEPQIRKIIDQIRPDRQTLMWSATWPKEVRKLAEDYLXDYVQINIGSLQL 644
           DEAD+MLD+GF   +RKI   +  +RQT+++SAT PK++ +L+  YL D  ++ +     
Sbjct: 225 DEADQMLDLGFIHALRKIAPLLPAERQTMLFSATMPKQMEELSRAYLTDPARVEVAPPGK 284

Query: 645 SANHNILQIVDVCQEHEKENKLNVLLQEIGQNQDPGARPLYLLKLKEKRXTXPEISDDMD 824
            A+  I Q V      E+  K  +L+  +G ++D  A  L   + K           +  
Sbjct: 285 IAD-KITQSVHFV---EQGAKTQLLIDLLGNHRDELA--LVFSRTKHGADRLARKLSNAG 338

Query: 825 GQLCACTXTNTARKG*SXXPILKRVVSSILVATDVGCXRS*CGMGSNFXINFDXPXXP 998
            +  A     +  +        +     +LVATDV   R        F  NFD P  P
Sbjct: 339 FETAAIHGNRSQGQRERALKAFREGTLKVLVATDVAA-RGIDIPDVRFVYNFDLPNVP 395


>UniRef50_Q6MN67 Cluster: ATP-dependent RNA helicase; n=3;
           Deltaproteobacteria|Rep: ATP-dependent RNA helicase -
           Bdellovibrio bacteriovorus
          Length = 505

 Score =  140 bits (339), Expect = 9e-32
 Identities = 101/300 (33%), Positives = 151/300 (50%), Gaps = 2/300 (0%)
 Frame = +3

Query: 105 LCQGKNLVGVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVA 284
           L  GK+++G A+TGSGKT A+ LP +  IN   P+ +     AL+L PTRELA Q+    
Sbjct: 81  LLAGKDIIGQAKTGSGKTAAFSLPILNKINLDQPLLQ-----ALILCPTRELASQVVTEI 135

Query: 285 SEFGNS-SYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLV 461
            + G     ++   + GG   REQA  LE GV+IV+ TPGRL DF+ +   +L     +V
Sbjct: 136 RKLGRRLPGLKVLAMTGGQSGREQADALENGVQIVVGTPGRLADFVGRNRIDLSAVKTVV 195

Query: 462 LDEADRMLDMGFEPQIRKIIDQIRPDRQTLMWSATWPKEVRKLAEDYLXDYVQINIGSLQ 641
           LDEAD+MLDMGF  +I+ ++  +   RQT+++SAT+P+ +  L+  Y     Q+ I    
Sbjct: 196 LDEADKMLDMGFADEIKTVMRDLPGSRQTVLFSATFPESIEHLSRKYQRHAQQVIIE--- 252

Query: 642 LSANHNILQIVDVCQEHEKENKLNVLLQEIGQNQDPGARPLYLLKLKEKRXTXPEISDDM 821
                N+++   +  + E  +K NVL++ +   Q P    +     K       E  +D+
Sbjct: 253 -DEEQNLIE--QLVYDSEDNDKTNVLMRIL--QQHPSDSTIIFCNTKNAVAEIAERLNDL 307

Query: 822 DGQLCACTXTNTARKG*SXXPILKRVVS-SILVATDVGCXRS*CGMGSNFXINFDXPXXP 998
            G    C   +  ++       + R  S  ILVATDV   R          INFD P  P
Sbjct: 308 -GAASGCLHGDMEQRERDRVMAMFRNGSHRILVATDVAA-RGLDIDNLELVINFDLPLSP 365


>UniRef50_Q4UA43 Cluster: DEAD-family helicase, putative; n=3;
            Piroplasmida|Rep: DEAD-family helicase, putative -
            Theileria annulata
          Length = 757

 Score =  140 bits (339), Expect = 9e-32
 Identities = 89/232 (38%), Positives = 125/232 (53%), Gaps = 27/232 (11%)
 Frame = +3

Query: 117  KNLVGVAQTGSGKTLAYILPAIVHINNQPPIRRG---DGPIALVLAPTRELAQQIQQVAS 287
            ++L+G+A TGSGKT A++LP + ++   PP+      DGP AL+LAP+RELA QI     
Sbjct: 377  RDLIGIAVTGSGKTAAFVLPMLTYVKKLPPLDDETSLDGPYALILAPSRELALQIYDETV 436

Query: 288  EFGNSSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLD 467
            +F      R+  V GG     QA +L +G EI+I TPGR+ D L++  T L +C Y++LD
Sbjct: 437  KFSAFCSCRSVAVVGGRNAESQAFELRKGCEIIIGTPGRVKDCLDRAYTVLSQCNYVILD 496

Query: 468  EADRMLDMGFEPQIRKIIDQI------------------------RPDRQTLMWSATWPK 575
            EADRM+DMGFE  ++ I+D I                        R  R T M+SAT P 
Sbjct: 497  EADRMIDMGFEDVLKYILDCIPSTNLKDRDESSALEQELSTKAGHRRYRITHMFSATMPP 556

Query: 576  EVRKLAEDYLXDYVQINIGSLQLSANHNILQIVDVCQEHEKENKLNVLLQEI 731
             V KL + YL     I+IG +      +I Q +D  QE +K   L   L+ +
Sbjct: 557  AVEKLTKRYLRAPAFISIGDVG-GGKTSITQQLDFVQESKKTRHLEETLETL 607


>UniRef50_Q64VR8 Cluster: ATP-dependent RNA helicase DeaD; n=14;
           Bacteria|Rep: ATP-dependent RNA helicase DeaD -
           Bacteroides fragilis
          Length = 427

 Score =  140 bits (338), Expect = 1e-31
 Identities = 81/208 (38%), Positives = 122/208 (58%)
 Frame = +3

Query: 105 LCQGKNLVGVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVA 284
           L QGK+L+G AQTG+GKT A+ +P +  +      +   G  ALVL PTRELA QI +  
Sbjct: 35  LLQGKDLLGCAQTGTGKTAAFSIPILQKLYKTDHRK---GIKALVLTPTRELAIQIGESF 91

Query: 285 SEFGNSSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVL 464
             +G  + +++  +FGG  ++ Q   L  G++I++ATPGRL+D + +G  +L    + VL
Sbjct: 92  EAYGRYTGLKHAVIFGGVGQKPQTDALRSGIQILVATPGRLLDLISQGFISLSSLDFFVL 151

Query: 465 DEADRMLDMGFEPQIRKIIDQIRPDRQTLMWSATWPKEVRKLAEDYLXDYVQINIGSLQL 644
           DEADRMLDMGF   I++I+  +   RQTL +SAT P E+  LA   L    ++ +     
Sbjct: 152 DEADRMLDMGFIHDIKRILKLLPARRQTLFFSATMPPEIETLANSMLTKPEKVEVTPAS- 210

Query: 645 SANHNILQIVDVCQEHEKENKLNVLLQE 728
           S    I Q V   ++ EK++ L  LL++
Sbjct: 211 STVDIISQQVYFVEKKEKKDLLIHLLKD 238


>UniRef50_Q12QV2 Cluster: DEAD/DEAH box helicase-like protein; n=16;
           Gammaproteobacteria|Rep: DEAD/DEAH box helicase-like
           protein - Shewanella denitrificans (strain OS217 / ATCC
           BAA-1090 / DSM 15013)
          Length = 433

 Score =  140 bits (338), Expect = 1e-31
 Identities = 74/204 (36%), Positives = 118/204 (57%)
 Frame = +3

Query: 111 QGKNLVGVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVASE 290
           +G++++  AQTG+GKT A+ LP +  ++ +P   +     AL+L PTRELA Q+    S 
Sbjct: 37  RGEDVLASAQTGTGKTAAFALPILQKMHERPMTVQHSNARALILTPTRELAAQVADNISA 96

Query: 291 FGNSSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDE 470
           +     +    ++GG     QA+ L++G +I++ATPGRL++ +     +L    +LVLDE
Sbjct: 97  YSKHMNISVLTIYGGMKMATQAQKLKQGADIIVATPGRLLEHIVACNLSLSNVEFLVLDE 156

Query: 471 ADRMLDMGFEPQIRKIIDQIRPDRQTLMWSATWPKEVRKLAEDYLXDYVQINIGSLQLSA 650
           ADRMLDMGF   I+KI+  +   RQ L++SAT+   V+KLA D L D  +I     Q + 
Sbjct: 157 ADRMLDMGFSTDIQKILQAVNKKRQNLLFSATFSTAVKKLANDML-DKPKIISADKQNTT 215

Query: 651 NHNILQIVDVCQEHEKENKLNVLL 722
              + Q+V   ++  K   L+ L+
Sbjct: 216 AATVSQVVYPVEQRRKRELLSELI 239


>UniRef50_A0RP33 Cluster: Putative ATP-dependent RNA helicase RhlE;
           n=1; Campylobacter fetus subsp. fetus 82-40|Rep:
           Putative ATP-dependent RNA helicase RhlE - Campylobacter
           fetus subsp. fetus (strain 82-40)
          Length = 624

 Score =  140 bits (338), Expect = 1e-31
 Identities = 77/204 (37%), Positives = 116/204 (56%)
 Frame = +3

Query: 102 SLCQGKNLVGVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQV 281
           ++ QGK+++  A+TG+GKT A+ LP +  ++++   ++      LVL PTRELA Q+ Q 
Sbjct: 34  AIMQGKDILAGARTGTGKTAAFALPILEKLSSKERNKKRPQTRVLVLVPTRELANQVTQN 93

Query: 282 ASEFGNSSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLV 461
              +      +   VFGG     Q + L+ G++IV+ATPGRL+D   +   +L+    LV
Sbjct: 94  IKSYAKKLPFKTLPVFGGVSSYPQIQALKSGIDIVVATPGRLLDLALQNALSLEHIDTLV 153

Query: 462 LDEADRMLDMGFEPQIRKIIDQIRPDRQTLMWSATWPKEVRKLAEDYLXDYVQINIGSLQ 641
            DEADRM DMGF   I++I+  +   RQ L++SAT+P EV  L    L D ++I I   Q
Sbjct: 154 FDEADRMFDMGFIHDIKQIVKMLPEKRQNLLFSATYPSEVMSLCNSMLKDPLRIQIEE-Q 212

Query: 642 LSANHNILQIVDVCQEHEKENKLN 713
            S   NI+Q V +    +K   LN
Sbjct: 213 NSTALNIIQRVILVDRDKKMELLN 236


>UniRef50_Q9PA24 Cluster: ATP-dependent RNA helicase rhlB; n=87;
           Proteobacteria|Rep: ATP-dependent RNA helicase rhlB -
           Xylella fastidiosa
          Length = 543

 Score =  140 bits (338), Expect = 1e-31
 Identities = 99/297 (33%), Positives = 160/297 (53%), Gaps = 5/297 (1%)
 Frame = +3

Query: 114 GKNLVGVAQTGSGKTLAYILPAIVHINNQPPI--RRGDGPIALVLAPTRELAQQIQQVAS 287
           G+++ G AQTG+GKTLA+++  +  + ++P +  R  + P AL+LAPTRELA QI   A 
Sbjct: 46  GRDIAGQAQTGTGKTLAFLVVVVNRLLSRPGLVNRNPEDPRALILAPTRELAIQIYNDAV 105

Query: 288 EFGNSSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEK-GTTNLQRCTYLVL 464
           +FG +  +R   ++GG    +Q   L +G ++VIATPGRLID+L++    +L+ C   VL
Sbjct: 106 KFGGNLGLRFALIYGGVDYDKQREMLRKGADVVIATPGRLIDYLKQHEVVSLRVCEICVL 165

Query: 465 DEADRMLDMGFEPQIRKIIDQI--RPDRQTLMWSATWPKEVRKLAEDYLXDYVQINIGSL 638
           DEADRM D+GF   IR I+ ++  R  RQTL++SAT    V +LA +Y+ +  ++ +   
Sbjct: 166 DEADRMFDLGFIKDIRFILRRLPERCSRQTLLFSATLSHRVLELAYEYMNEPEKL-VAET 224

Query: 639 QLSANHNILQIVDVCQEHEKENKLNVLLQEIGQNQDPGARPLYLLKLKEKRXTXPEISDD 818
           +      + Q +    E   E K+ +LL  + +++  G R +  +  K          D+
Sbjct: 225 ETVTTTRVRQRIYFPAE---EEKIPLLLGLLSRSE--GMRTMVFVNTKVFVEGVARALDE 279

Query: 819 MDGQLCACTXTNTARKG*SXXPILKRVVSSILVATDVGCXRS*CGMGSNFXINFDXP 989
              ++   +     RK  +     ++    ILVATDV   R     G N+  N+D P
Sbjct: 280 AGYRVGVLSGDVPQRKRETLLNRFQKGQLEILVATDVAA-RGLHIDGVNYVYNYDLP 335


>UniRef50_Q1MY97 Cluster: DEAD/DEAH box helicase-like protein; n=2;
           Gammaproteobacteria|Rep: DEAD/DEAH box helicase-like
           protein - Oceanobacter sp. RED65
          Length = 614

 Score =  139 bits (337), Expect = 1e-31
 Identities = 75/189 (39%), Positives = 118/189 (62%), Gaps = 1/189 (0%)
 Frame = +3

Query: 105 LCQGKNLVGVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVA 284
           L +GK+++G+AQTG+GKT A+ LP +    N+  +R    P  LVLAPTRELAQQ+    
Sbjct: 40  LLEGKDVLGLAQTGTGKTAAFTLPLLARTQNE--VRE---PQVLVLAPTRELAQQVAMAV 94

Query: 285 SEFG-NSSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLV 461
             +  + S V+   ++GG+    Q R L++G + V+ TPGR++D + +GT  L+    +V
Sbjct: 95  ESYSKHESNVKVASIYGGSDFGSQFRALKQGPQWVVGTPGRVMDHIRRGTLKLEGIRAVV 154

Query: 462 LDEADRMLDMGFEPQIRKIIDQIRPDRQTLMWSATWPKEVRKLAEDYLXDYVQINIGSLQ 641
           LDEAD ML MGF   +  ++DQ+   RQ  ++SAT PK+++ +AE +L +  +I I S +
Sbjct: 155 LDEADEMLRMGFIDDVDWVLDQVPEKRQIALFSATMPKQIKAVAEKHLREPTEIRIKS-K 213

Query: 642 LSANHNILQ 668
            + N +I Q
Sbjct: 214 TATNESIEQ 222


>UniRef50_Q0LVA0 Cluster: Helicase-like:DEAD/DEAH box helicase-like;
           n=7; Alphaproteobacteria|Rep: Helicase-like:DEAD/DEAH
           box helicase-like - Caulobacter sp. K31
          Length = 542

 Score =  139 bits (337), Expect = 1e-31
 Identities = 76/174 (43%), Positives = 109/174 (62%), Gaps = 2/174 (1%)
 Frame = +3

Query: 114 GKNLVGVAQTGSGKTLAYILPAIVHI--NNQPPIRRGDGPIALVLAPTRELAQQIQQVAS 287
           G++L+G+AQTG+GKT A+ LP +  +  + +P  RRG     LVL+PTRELA QI +   
Sbjct: 102 GRDLLGIAQTGTGKTAAFALPILHRLAEDKKPAPRRGFR--CLVLSPTRELATQIAESFR 159

Query: 288 EFGNSSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLD 467
           ++G    +    +FGG     Q + L  GV++V+ATPGRL+D L + + +L      VLD
Sbjct: 160 DYGKHMGLTVATIFGGVKYGPQMKALAAGVDVVVATPGRLMDHLGEKSAHLNGVEIFVLD 219

Query: 468 EADRMLDMGFEPQIRKIIDQIRPDRQTLMWSATWPKEVRKLAEDYLXDYVQINI 629
           EAD+MLD+GF   IRKI  Q+  +RQ L +SAT P E+ KLA + L +  Q+ I
Sbjct: 220 EADQMLDLGFVVPIRKIASQLPKERQNLFFSATMPSEIGKLAGELLKNPAQVAI 273


>UniRef50_A7CSF3 Cluster: DEAD/DEAH box helicase domain protein;
           n=1; Opitutaceae bacterium TAV2|Rep: DEAD/DEAH box
           helicase domain protein - Opitutaceae bacterium TAV2
          Length = 343

 Score =  139 bits (337), Expect = 1e-31
 Identities = 78/206 (37%), Positives = 116/206 (56%)
 Frame = +3

Query: 114 GKNLVGVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVASEF 293
           G++LV  AQTG+GKT A+ LP +  +    P     GP  LVL PTREL  Q++    +F
Sbjct: 38  GRDLVASAQTGTGKTAAFALPVLARLGGHRP----GGPRVLVLEPTRELGAQVETAFRDF 93

Query: 294 GNSSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEA 473
           G  + VR+T + GG    +Q  DL  G +IVIAT GRL+DF+++    L     L+LDE 
Sbjct: 94  GRFTDVRSTIIHGGVGYGKQRSDLRAGTDIVIATVGRLMDFIKEKEIRLDSVEVLILDEV 153

Query: 474 DRMLDMGFEPQIRKIIDQIRPDRQTLMWSATWPKEVRKLAEDYLXDYVQINIGSLQLSAN 653
           DRMLDMGF   +++I+      RQTL +SAT P E+  +A   L +  +I IG  + + N
Sbjct: 154 DRMLDMGFINDVKRIVGLCPKQRQTLFFSATIPPEIEDVARFALQNPERIEIGRAR-TVN 212

Query: 654 HNILQIVDVCQEHEKENKLNVLLQEI 731
            ++   +      +K + L  +L ++
Sbjct: 213 ESVKHAIYPVTFEQKFDLLCAILDKL 238


>UniRef50_Q5ENJ0 Cluster: Chloroplast RNA helicase; n=1; Heterocapsa
           triquetra|Rep: Chloroplast RNA helicase - Heterocapsa
           triquetra (Dinoflagellate)
          Length = 324

 Score =  139 bits (337), Expect = 1e-31
 Identities = 79/186 (42%), Positives = 109/186 (58%), Gaps = 5/186 (2%)
 Frame = +3

Query: 111 QGKNLVGVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVASE 290
           Q ++ +GVA TGSGKTLA++LP + H+  Q     G  P  LVLAPTREL  QI   A +
Sbjct: 142 QMRDTIGVAATGSGKTLAFLLPGMAHVAAQV----GTEPRMLVLAPTRELVMQIATEAEQ 197

Query: 291 FGNSSYVRNTCVFGG----APKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYL 458
           F     +R    FGG      +  Q+R L RGV++++ TPGRL  F E     L+  +YL
Sbjct: 198 FALGFRLRLGLAFGGQDGEGDQMMQSRVLRRGVDVLVGTPGRLTKFAEASVVYLREVSYL 257

Query: 459 VLDEADRMLDMGFEPQIRKIIDQIRPDRQTLMWSATWPKEVRKLAEDYLXDYVQINIGSL 638
           V+DEAD+ML  GFEPQI++++    P+RQ  ++SATWP  V   A   +   V+I +   
Sbjct: 258 VIDEADQMLTDGFEPQIQEVLALTHPNRQVSLFSATWPPAVEAFAASVVDQPVRIVVDRA 317

Query: 639 Q-LSAN 653
             L+AN
Sbjct: 318 DVLTAN 323


>UniRef50_Q89M45 Cluster: ATP-dependent RNA helicase; n=29; cellular
           organisms|Rep: ATP-dependent RNA helicase -
           Bradyrhizobium japonicum
          Length = 500

 Score =  139 bits (336), Expect = 2e-31
 Identities = 78/205 (38%), Positives = 117/205 (57%), Gaps = 1/205 (0%)
 Frame = +3

Query: 117 KNLVGVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVASEFG 296
           K+++G+AQTG+GKT A++LP +  +       R   P  L+L PTRELA Q+++    +G
Sbjct: 39  KDVLGIAQTGTGKTAAFVLPMLTILEKGRA--RARMPRTLILEPTRELAAQVKENFDRYG 96

Query: 297 NSSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEAD 476
               +    + GG    +Q   L RGV+++IATPGRL+D  E+G   L     LV+DEAD
Sbjct: 97  AGQKLNVALLIGGVSFGDQDAKLTRGVDVLIATPGRLLDHTERGGLLLTGVELLVIDEAD 156

Query: 477 RMLDMGFEPQIRKIIDQIRPDRQTLMWSATWPKEVRKLAEDYLXDYVQINIGSLQLSA-N 653
           RMLDMGF P I +I   +   RQTL ++AT P E+R++ E +L +  ++ +     +A  
Sbjct: 157 RMLDMGFIPDIERICKLVPFTRQTLFFTATMPPEIRRITETFLHNPQKVEVSKPATTAVT 216

Query: 654 HNILQIVDVCQEHEKENKLNVLLQE 728
               Q+    + HEK   L  LL+E
Sbjct: 217 VTQSQVPAGKKAHEKRELLRRLLRE 241


>UniRef50_A4RW46 Cluster: Predicted protein; n=2; Ostreococcus|Rep:
           Predicted protein - Ostreococcus lucimarinus CCE9901
          Length = 654

 Score =  139 bits (336), Expect = 2e-31
 Identities = 81/199 (40%), Positives = 121/199 (60%), Gaps = 8/199 (4%)
 Frame = +3

Query: 114 GKNLVGVAQTGSGKTLAYILPAIVHINNQPPI----RRGDG--PIALVLAPTRELAQQIQ 275
           GK++VG A+TG GKTLA++LP +  +    P+    RR  G  P+ +VLAPTRELA+Q+ 
Sbjct: 120 GKDVVGRARTGCGKTLAFVLPIVEEMAKISPMPANGRRVQGRRPMCVVLAPTRELAKQVF 179

Query: 276 QVASEFGNSSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTY 455
                 GNS   ++ CV+GG P REQ   L  G ++VI TPGR+ D LE+ T  + +  +
Sbjct: 180 ADFDWIGNSFGFKSVCVYGGTPYREQEMGLRGGCDVVIGTPGRMKDHLERKTLMMDKLKF 239

Query: 456 LVLDEADRMLDMGFEPQIRKIIDQIRPDRQTLMWSATWPKEVRKLAEDYL-XDYVQIN-I 629
            VLDEAD ML+MGF   +  I+ +   D QTL++SAT P  V+ +A+ +L  DY  ++ +
Sbjct: 240 RVLDEADEMLNMGFVDDVELIL-KSSGDVQTLLFSATLPPWVKDIAKRFLKPDYATVDLV 298

Query: 630 GSLQLSANHNILQIVDVCQ 686
           G  +  A+  +  ++  CQ
Sbjct: 299 GDQKQKASGAVQHMLLPCQ 317


>UniRef50_Q1GJ43 Cluster: DEAD/DEAH box helicase-like protein; n=30;
           cellular organisms|Rep: DEAD/DEAH box helicase-like
           protein - Silicibacter sp. (strain TM1040)
          Length = 710

 Score =  138 bits (335), Expect = 3e-31
 Identities = 85/206 (41%), Positives = 124/206 (60%), Gaps = 4/206 (1%)
 Frame = +3

Query: 114 GKNLVGVAQTGSGKTLAYILP-AIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVASE 290
           G +L+  AQTGSGKT+ + L  A   +       R   P+ALV+APTRELA Q+++  S 
Sbjct: 39  GADLLVSAQTGSGKTVGFGLAIAPTILGEDGTFERAASPLALVIAPTRELALQVKRELSW 98

Query: 291 -FGNSSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLD 467
            +G++  V  +CV GG   R++ R LERG  IV+ATPGRL D + +G+ +L     +VLD
Sbjct: 99  LYGDAGAVLASCV-GGMDMRDERRALERGAHIVVATPGRLRDHITRGSIDLSGVAAVVLD 157

Query: 468 EADRMLDMGFEPQIRKIIDQIRPDRQTLMWSATWPKEVRKLAEDYLXDYVQINIGSLQLS 647
           EAD MLD+GF   +  I+++   DRQTL++SAT  K +  LA+ Y  D  +I+  ++  S
Sbjct: 158 EADEMLDLGFREDLEFILEETPEDRQTLLFSATVSKPIAALAQTYQNDAQRIS--TINKS 215

Query: 648 ANH-NILQIVDVCQEHEKENK-LNVL 719
             H +I  +  V   H+ EN  +NVL
Sbjct: 216 EQHSDISYLAHVVAPHDIENAIINVL 241


>UniRef50_Q11UI8 Cluster: DEAD box-related helicase; n=3;
           Sphingobacteriales|Rep: DEAD box-related helicase -
           Cytophaga hutchinsonii (strain ATCC 33406 / NCIMB 9469)
          Length = 437

 Score =  138 bits (335), Expect = 3e-31
 Identities = 90/205 (43%), Positives = 118/205 (57%), Gaps = 3/205 (1%)
 Frame = +3

Query: 105 LCQGKNLVGVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVA 284
           +    +LV  AQTG+GKT AY+LP +  I         D    LVL PTRELA QI Q  
Sbjct: 35  IMSNSDLVACAQTGTGKTAAYMLPILHKIIES----NTDSLDTLVLVPTRELAIQIDQQI 90

Query: 285 SEFGNSSYVRNTCVFGG---APKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTY 455
             F     V +  V+GG   A   +Q + L  G  IVIATPGRL+  L+ GT NL++  +
Sbjct: 91  EGFSYFINVSSIAVYGGGDGATWDQQRKALTDGANIVIATPGRLLAQLQSGTANLKQIKH 150

Query: 456 LVLDEADRMLDMGFEPQIRKIIDQIRPDRQTLMWSATWPKEVRKLAEDYLXDYVQINIGS 635
           LVLDEADRMLDMGF   I ++I  +  +RQT+M+SAT P ++R LA   + D  QINI  
Sbjct: 151 LVLDEADRMLDMGFYDDIVRVISYLPTERQTIMFSATMPTKMRALANKLMKDPQQINIAI 210

Query: 636 LQLSANHNILQIVDVCQEHEKENKL 710
            + +    ILQ   +  E E++NKL
Sbjct: 211 SKPA--EGILQQAYLVYE-EQKNKL 232


>UniRef50_A6NQG8 Cluster: Putative uncharacterized protein; n=2;
           Bacteroidales|Rep: Putative uncharacterized protein -
           Bacteroides capillosus ATCC 29799
          Length = 636

 Score =  138 bits (335), Expect = 3e-31
 Identities = 72/173 (41%), Positives = 108/173 (62%), Gaps = 1/173 (0%)
 Frame = +3

Query: 114 GKNLVGVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPI-ALVLAPTRELAQQIQQVASE 290
           G++++G AQTG+GKT A+  P +  +    P  R   PI +L+L PTRELA QIQ+    
Sbjct: 38  GRDVLGCAQTGTGKTCAFAAPILQRLGGDIPAGR---PIRSLILTPTRELALQIQESFEA 94

Query: 291 FGNSSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDE 470
           +G    +R+  +FGG  ++ Q   L++GV+I++ATPGRL+D   +G  +L R    VLDE
Sbjct: 95  YGKHLPLRSAVIFGGVGQQPQVDKLKKGVDILVATPGRLLDLQGQGFVDLSRLEIFVLDE 154

Query: 471 ADRMLDMGFEPQIRKIIDQIRPDRQTLMWSATWPKEVRKLAEDYLXDYVQINI 629
           ADRMLDMGF   +R+++  +   +QTL +SAT P EV  L    L + V++ +
Sbjct: 155 ADRMLDMGFLHDVRRVLKLLPAVKQTLFFSATMPPEVMDLVNGLLKNPVKVAV 207


>UniRef50_Q8L7S8 Cluster: DEAD-box ATP-dependent RNA helicase 3;
           n=13; Magnoliophyta|Rep: DEAD-box ATP-dependent RNA
           helicase 3 - Arabidopsis thaliana (Mouse-ear cress)
          Length = 748

 Score =  138 bits (335), Expect = 3e-31
 Identities = 74/178 (41%), Positives = 113/178 (63%), Gaps = 5/178 (2%)
 Frame = +3

Query: 111 QGKNLVGVAQTGSGKTLAYILPAIVHINNQP----PIRR-GDGPIALVLAPTRELAQQIQ 275
           QG++++  A+TG+GKTLA+ +P I  +  +       RR G  P  LVLAPTRELA+Q++
Sbjct: 138 QGRDIIARAKTGTGKTLAFGIPIIKRLTEEAGDYTAFRRSGRLPKFLVLAPTRELAKQVE 197

Query: 276 QVASEFGNSSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTY 455
           +   E  ++ Y+   CV+GG     Q   L RGV++V+ TPGR+ID +E  +  L    Y
Sbjct: 198 KEIKE--SAPYLSTVCVYGGVSYTIQQSALTRGVDVVVGTPGRIIDLIEGRSLKLGEVEY 255

Query: 456 LVLDEADRMLDMGFEPQIRKIIDQIRPDRQTLMWSATWPKEVRKLAEDYLXDYVQINI 629
           LVLDEAD+ML +GFE  +  I++ +   RQ++++SAT P  V+KLA  YL + + I++
Sbjct: 256 LVLDEADQMLAVGFEEAVESILENLPTKRQSMLFSATMPTWVKKLARKYLDNPLNIDL 313


>UniRef50_Q5KNF8 Cluster: Pre-mRNA-splicing ATP-dependent RNA helicase
            PRP28; n=1; Filobasidiella neoformans|Rep:
            Pre-mRNA-splicing ATP-dependent RNA helicase PRP28 -
            Cryptococcus neoformans (Filobasidiella neoformans)
          Length = 738

 Score =  138 bits (335), Expect = 3e-31
 Identities = 85/232 (36%), Positives = 129/232 (55%), Gaps = 24/232 (10%)
 Frame = +3

Query: 111  QGKNLVGVAQTGSGKTLAYILPAIVHINNQPPIR---RGDGPIALVLAPTRELAQQIQQV 281
            Q ++L+GVA+TGSGKT A+++P + +I + PP+    R  GP AL++APTRELAQQI+  
Sbjct: 351  QNRDLIGVAKTGSGKTAAFVIPMLDYIGHLPPLNDDNRHLGPYALIMAPTRELAQQIETE 410

Query: 282  ASEFGNSSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLV 461
               F      +   + GG    EQ   L  G EI+IATPGRL D ++K    + +C Y+V
Sbjct: 411  TRRFALPLGYKCVSIVGGRSVEEQQFALRDGAEIIIATPGRLKDMVDKSILVMSQCRYVV 470

Query: 462  LDEADRMLDMGFEPQIRKIIDQ-----IRPD----------------RQTLMWSATWPKE 578
            +DEADRM+D+GFE  +  I+D      ++PD                R T ++SAT P  
Sbjct: 471  MDEADRMVDLGFEVDLNFILDSMPATFVKPDDSVALQPTKEGEWQGWRVTTLFSATMPPA 530

Query: 579  VRKLAEDYLXDYVQINIGSLQLSANHNILQIVDVCQEHEKENKLNVLLQEIG 734
            V +LA  YL     + IG+   + +    ++  V  + +K+ +L  +L+ IG
Sbjct: 531  VERLARKYLIKPATVVIGNAGEAVDTVEQRVEFVHGDEKKKARLIEILRTIG 582


>UniRef50_Q0AVQ9 Cluster: ATP-dependent RNA helicase; n=1;
           Syntrophomonas wolfei subsp. wolfei str. Goettingen|Rep:
           ATP-dependent RNA helicase - Syntrophomonas wolfei
           subsp. wolfei (strain Goettingen)
          Length = 530

 Score =  138 bits (334), Expect = 3e-31
 Identities = 72/164 (43%), Positives = 104/164 (63%)
 Frame = +3

Query: 114 GKNLVGVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVASEF 293
           G +L+G AQTG+GKT ++ +P +    N+  + +G+G  ALVL PTRELA Q+ +  S  
Sbjct: 41  GLDLMGQAQTGTGKTASFGIPIL----NR--VIKGEGLQALVLCPTRELAVQVTEEISSL 94

Query: 294 GNSSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEA 473
                ++   ++GG     Q R L R  EI++ TPGRL+D + +GT +L    Y+VLDEA
Sbjct: 95  SRRMRIQVLAIYGGQSIELQLRSLRRNPEIIVGTPGRLMDHMNRGTISLSPLKYVVLDEA 154

Query: 474 DRMLDMGFEPQIRKIIDQIRPDRQTLMWSATWPKEVRKLAEDYL 605
           D MLDMGF P I+KI+ Q   +RQT ++SAT P EVR+L   ++
Sbjct: 155 DEMLDMGFLPDIQKILSQCPRERQTFLFSATLPDEVRELGTKFM 198


>UniRef50_Q81JK1 Cluster: ATP-dependent RNA helicase, DEAD/DEAH box
           family; n=30; Firmicutes|Rep: ATP-dependent RNA
           helicase, DEAD/DEAH box family - Bacillus anthracis
          Length = 481

 Score =  138 bits (333), Expect = 5e-31
 Identities = 77/213 (36%), Positives = 128/213 (60%)
 Frame = +3

Query: 111 QGKNLVGVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVASE 290
           Q K+LV  +QTGSGKT ++ +P    +  +      + P ALVL PTRELA Q+++  + 
Sbjct: 40  QKKDLVVKSQTGSGKTASFGIPLCEMVEWEE-----NKPQALVLTPTRELAVQVKEDITN 94

Query: 291 FGNSSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDE 470
            G    ++   ++G +P   Q  +L++   IV+ TPGR++D +EKGT +L+R  YLV+DE
Sbjct: 95  IGRFKRIKAAAIYGKSPFARQKLELKQKTHIVVGTPGRVLDHIEKGTLSLERLKYLVIDE 154

Query: 471 ADRMLDMGFEPQIRKIIDQIRPDRQTLMWSATWPKEVRKLAEDYLXDYVQINIGSLQLSA 650
           AD ML+MGF  Q+  IID++   R T+++SAT P++V +L+  Y+     I I +  ++ 
Sbjct: 155 ADEMLNMGFIDQVEAIIDELPTKRMTMLFSATLPEDVERLSRTYMNAPTHIEIKAAGITT 214

Query: 651 NHNILQIVDVCQEHEKENKLNVLLQEIGQNQDP 749
           +    +I     E  +E KL+ LL+++   ++P
Sbjct: 215 D----KIEHTLFEVREEEKLS-LLKDVTTIENP 242


>UniRef50_Q3AX69 Cluster: DEAD/DEAH box helicase-like; n=15;
           Cyanobacteria|Rep: DEAD/DEAH box helicase-like -
           Synechococcus sp. (strain CC9902)
          Length = 624

 Score =  138 bits (333), Expect = 5e-31
 Identities = 77/206 (37%), Positives = 116/206 (56%), Gaps = 1/206 (0%)
 Frame = +3

Query: 105 LCQGKNLVGVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVA 284
           L  G++LVG AQTG+GKT A+ LP +  + +         P  LVLAPTRELA Q+    
Sbjct: 105 LMLGRDLVGQAQTGTGKTAAFALPLLERLESGQKT-----PQVLVLAPTRELAMQVADSF 159

Query: 285 SEFG-NSSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLV 461
             +     +++   V+GG   R Q   L RGV++V+ TPGR++D + +GT +    T LV
Sbjct: 160 KAYAAGHPHLKVLAVYGGTDFRSQISTLRRGVDVVVGTPGRVMDHMRQGTLDTSGLTSLV 219

Query: 462 LDEADRMLDMGFEPQIRKIIDQIRPDRQTLMWSATWPKEVRKLAEDYLXDYVQINIGSLQ 641
           LDEAD ML MGF   +  I++Q+  +RQ +++SAT P E+R+L++ YL D  ++ I +  
Sbjct: 220 LDEADEMLRMGFIDDVEWILEQLPKERQVVLFSATMPPEIRRLSKRYLNDPAEVTIKTKD 279

Query: 642 LSANHNILQIVDVCQEHEKENKLNVL 719
                   + + V   H+ E    VL
Sbjct: 280 QDGKLIRQRAITVPMSHKLEALQRVL 305


>UniRef50_A6W6A7 Cluster: DEAD/DEAH box helicase domain protein;
           n=1; Kineococcus radiotolerans SRS30216|Rep: DEAD/DEAH
           box helicase domain protein - Kineococcus radiotolerans
           SRS30216
          Length = 590

 Score =  138 bits (333), Expect = 5e-31
 Identities = 68/166 (40%), Positives = 99/166 (59%)
 Frame = +3

Query: 114 GKNLVGVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVASEF 293
           G++++G A+TGSGKTL + LP +  +  Q   R    P  LVL PTRELA Q+       
Sbjct: 183 GRDILGRARTGSGKTLGFGLPMLARLAQQKRPRITGAPRGLVLVPTRELAMQVADALRPL 242

Query: 294 GNSSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEA 473
           G+S  +R + V GG P   Q   L+RG++++IATPGRL+D +++   +L      VLDEA
Sbjct: 243 GDSLDLRLSVVVGGVPYGRQIAALQRGIDVLIATPGRLVDLIDRDAVSLAEVDVAVLDEA 302

Query: 474 DRMLDMGFEPQIRKIIDQIRPDRQTLMWSATWPKEVRKLAEDYLXD 611
           D M D+GF P +R I++  +P  Q + +SAT  + V  L  D+L D
Sbjct: 303 DHMADLGFLPNVRAILEGTKPGGQRMFFSATLDRGVEALVTDFLTD 348


>UniRef50_Q54CD6 Cluster: Putative uncharacterized protein; n=1;
           Dictyostelium discoideum AX4|Rep: Putative
           uncharacterized protein - Dictyostelium discoideum AX4
          Length = 697

 Score =  138 bits (333), Expect = 5e-31
 Identities = 82/242 (33%), Positives = 135/242 (55%), Gaps = 14/242 (5%)
 Frame = +3

Query: 102 SLCQGKNLVGVAQTGSGKTLAYILPAIVH------------INNQPPIRRGDGPIALVLA 245
           ++  G +++G +  GSGKTL Y+ P I H            I  +   ++  G + LVL 
Sbjct: 239 AILTGHDIIGTSLPGSGKTLGYLAPMIPHCLARVDRGGKNKITGEKAPKQYTGILVLVLV 298

Query: 246 PTRELAQQIQQVASEFGNSSYVRNTCVFGGAPKREQARDLERGV-EIVIATPGRLIDFLE 422
           PTREL  Q+            ++ + ++GG  K  Q   LE+   +I+I+TPGRLI+ +E
Sbjct: 299 PTRELGLQVHSNTLIITQLFGIKTSVIYGGISKNLQIEQLEKEKPQILISTPGRLIEMIE 358

Query: 423 KGTTNLQRCTYLVLDEADRMLDMGFEPQIRKIIDQIRPDRQTLMWSATWPKEVRKLAEDY 602
            G  +L   T LVLDEAD+ML  G  PQ+++I  QIRPD Q +++SAT+P  ++++++D+
Sbjct: 359 NGHVDLSSVTMLVLDEADKMLSKGLIPQLKQIRGQIRPDSQNILFSATFPDSLKEVSKDW 418

Query: 603 LXD-YVQINIGSLQLSANHNILQIVDVCQEHEKENKLNVLLQEIGQNQDPGARPLYLLKL 779
           + D  +++ IGS +L   ++I Q   +   H+K   L  LL E  Q ++     ++  K+
Sbjct: 419 IKDPSIRLRIGSSELPKLNHIQQDAQLIAHHKKPRALIKLLSE-PQFKEKKKTIVFFNKI 477

Query: 780 KE 785
           KE
Sbjct: 478 KE 479


>UniRef50_Q8XKJ8 Cluster: ATP-dependent RNA helicase; n=12;
           Clostridium|Rep: ATP-dependent RNA helicase -
           Clostridium perfringens
          Length = 528

 Score =  137 bits (332), Expect = 6e-31
 Identities = 72/182 (39%), Positives = 111/182 (60%), Gaps = 3/182 (1%)
 Frame = +3

Query: 111 QGKNLVGVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVASE 290
           +G +++G AQTG+GKT A+       INN     +   P AL+LAPTRELA Q+ +    
Sbjct: 40  EGHDIIGQAQTGTGKTAAF---GCAIINNADFSGKKKSPKALILAPTRELAIQVNEELVR 96

Query: 291 FGNSSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDE 470
            G    +    ++GG P   Q R L+ GV+IV+ TPGR++D + + +  L    +LVLDE
Sbjct: 97  LGKHEKLSVLPIYGGQPIDRQIRALKNGVDIVVGTPGRVLDLIRRKSLPLNDIGFLVLDE 156

Query: 471 ADRMLDMGFEPQIRKIIDQIRPDRQTLMWSATWPKEVRKLAEDYLXD---YVQINIGSLQ 641
           AD ML+MGF   + +I+  ++ DRQTL++SAT P +++KLA +Y+ +   ++ I   SL 
Sbjct: 157 ADEMLNMGFIDDLEEIVKSLKTDRQTLLFSATMPPQIKKLARNYMKEDTKHIAIKKSSLT 216

Query: 642 LS 647
           +S
Sbjct: 217 VS 218


>UniRef50_Q08Q14 Cluster: HeliCase, c-terminal:dead/deah box
           helicase, n-terminal; n=3; Bacteria|Rep: HeliCase,
           c-terminal:dead/deah box helicase, n-terminal -
           Stigmatella aurantiaca DW4/3-1
          Length = 608

 Score =  137 bits (332), Expect = 6e-31
 Identities = 71/175 (40%), Positives = 105/175 (60%)
 Frame = +3

Query: 105 LCQGKNLVGVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVA 284
           L +GK+L+G+A TG+GKT A+ LP +  I   P         ALVL PTRELA Q+ +  
Sbjct: 70  LLEGKDLLGIAATGTGKTAAFSLPLLQRIT--PGAHAPFTASALVLVPTRELAMQVAEAI 127

Query: 285 SEFGNSSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVL 464
             +G    +    ++GG    +Q R L+RGV++V+ATPGR +D L++ T  L++   +VL
Sbjct: 128 HRYGQKLGISVVPLYGGQVISQQLRVLKRGVDVVVATPGRALDHLQRKTLKLEQVRVVVL 187

Query: 465 DEADRMLDMGFEPQIRKIIDQIRPDRQTLMWSATWPKEVRKLAEDYLXDYVQINI 629
           DEAD MLDMGF   +  I+      RQT ++SAT P  +  +AE +L + V++ I
Sbjct: 188 DEADEMLDMGFAEDLEAILSSTPEKRQTALFSATLPPRIASIAERHLREPVRVRI 242


>UniRef50_P42305 Cluster: ATP-dependent RNA helicase dbpA; n=9;
           Firmicutes|Rep: ATP-dependent RNA helicase dbpA -
           Bacillus subtilis
          Length = 479

 Score =  137 bits (332), Expect = 6e-31
 Identities = 94/294 (31%), Positives = 160/294 (54%), Gaps = 3/294 (1%)
 Frame = +3

Query: 117 KNLVGVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVASEFG 296
           K+LV  +QTGSGKT ++ +P +  + N    +    P AL+L PTRELA Q+++  +  G
Sbjct: 40  KDLVVKSQTGSGKTASFGIP-LCELANWDENK----PQALILTPTRELAVQVKEDITNIG 94

Query: 297 NSSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEAD 476
               ++ T VFG +   +Q  +L++   IV+ TPGR++D +EKGT  L R +YLV+DEAD
Sbjct: 95  RFKRIKATAVFGKSSFDKQKAELKQKSHIVVGTPGRVLDHIEKGTLPLDRLSYLVIDEAD 154

Query: 477 RMLDMGFEPQIRKIIDQIRPDRQTLMWSATWPKEVRKLAEDYLXDYVQINIGSLQLSANH 656
            ML+MGF  Q+  II  +  +R T+++SAT P+++ KL+  Y+ +   I + +  L+  +
Sbjct: 155 EMLNMGFIEQVEAIIKHLPTERTTMLFSATLPQDIEKLSRQYMQNPEHIEVKAAGLTTRN 214

Query: 657 NILQIVDVCQEHEKENKLNVLLQEIGQNQDPGARPLYLLKLKEKRXTXPEISDDMDGQLC 836
               ++ V     +ENK + LL+++   ++P +  ++  + KE      +++D++D    
Sbjct: 215 IEHAVIQV----REENKFS-LLKDVLMTENPDSCIIF-CRTKEH---VNQLTDELDDLGY 265

Query: 837 ACTXTNTARKG*SXXPIL---KRVVSSILVATDVGCXRS*CGMGSNFXINFDXP 989
            C   +          ++   KR     LVATDV   R       +  IN+D P
Sbjct: 266 PCDKIHGGMIQEDRFDVMNEFKRGEYRYLVATDVAA-RGIDIENISLVINYDLP 318


>UniRef50_Q7UNV7 Cluster: ATP-dependent RNA helicase; n=2;
           Planctomycetaceae|Rep: ATP-dependent RNA helicase -
           Rhodopirellula baltica
          Length = 452

 Score =  137 bits (331), Expect = 8e-31
 Identities = 71/171 (41%), Positives = 103/171 (60%)
 Frame = +3

Query: 114 GKNLVGVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVASEF 293
           GK+++G A+TG+GKT A+ +P +  +++    R    P A+V+ PTRELA Q+   A   
Sbjct: 81  GKDVIGQARTGTGKTAAFSIPILEQLDSLEDCR---DPQAIVIVPTRELADQVAAEAERL 137

Query: 294 GNSSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEA 473
                     + GG     Q R LE G ++V+ TPGR+ D L++GT        +VLDEA
Sbjct: 138 ARGVPTEIAVLSGGKNMNRQLRQLENGTQLVVGTPGRVHDHLQRGTLRTNNVWCVVLDEA 197

Query: 474 DRMLDMGFEPQIRKIIDQIRPDRQTLMWSATWPKEVRKLAEDYLXDYVQIN 626
           DRMLD+GF PQI +I+ +   +RQTL+ SAT P  VR+LAE Y+ + V I+
Sbjct: 198 DRMLDIGFRPQIERIMRKCPRNRQTLLLSATLPPVVRRLAESYMHEPVVID 248


>UniRef50_Q31AC4 Cluster: DEAD/DEAH box helicase-like protein; n=7;
           Prochlorococcus marinus|Rep: DEAD/DEAH box helicase-like
           protein - Prochlorococcus marinus (strain MIT 9312)
          Length = 593

 Score =  137 bits (331), Expect = 8e-31
 Identities = 78/208 (37%), Positives = 120/208 (57%), Gaps = 1/208 (0%)
 Frame = +3

Query: 105 LCQGKNLVGVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVA 284
           L  G++L+G AQTG+GKT A+ LP I  + +   +        LV+ PTRELA Q+ +  
Sbjct: 85  LMLGRDLLGQAQTGTGKTAAFALPLIEKLADNKELNAK----VLVMTPTRELATQVAESF 140

Query: 285 SEFGN-SSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLV 461
             + + S+  +   ++GG   R Q   L+R V++V+ TPGR++D + +GT  +     LV
Sbjct: 141 KSYSSESTNFKTIAIYGGTDYRNQIYALKRKVDVVVGTPGRIMDHIRQGTFKVNSINCLV 200

Query: 462 LDEADRMLDMGFEPQIRKIIDQIRPDRQTLMWSATWPKEVRKLAEDYLXDYVQINIGSLQ 641
           LDEAD ML+MGF   I  IIDQ+  ++Q +++SAT P E+R +A+ YL D  +I I S++
Sbjct: 201 LDEADEMLNMGFLEDIEWIIDQLPKNKQMVLFSATMPNEIRNIAKKYLNDPAEILIKSVK 260

Query: 642 LSANHNILQIVDVCQEHEKENKLNVLLQ 725
                 I Q     Q H K + L  +L+
Sbjct: 261 -KETQLISQKFLYVQRHHKLDALKRILE 287


>UniRef50_Q0S0C7 Cluster: ATP-dependent RNA helicase; n=5;
           Actinomycetales|Rep: ATP-dependent RNA helicase -
           Rhodococcus sp. (strain RHA1)
          Length = 465

 Score =  137 bits (331), Expect = 8e-31
 Identities = 78/168 (46%), Positives = 103/168 (61%)
 Frame = +3

Query: 114 GKNLVGVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVASEF 293
           G++++G A TGSGKTLA+ LP +V +      RRG  P  +VL PTRELA QI++   E 
Sbjct: 51  GRDVLGRAPTGSGKTLAFGLPMLVRLKGAAS-RRGF-PRGIVLVPTRELALQIERALDEP 108

Query: 294 GNSSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEA 473
             S  +R   V GG P + Q   L RGV+++IATPGRL D + +G+ +L   T L LDEA
Sbjct: 109 ALSVGLRVANVVGGIPIKRQVEILSRGVDLLIATPGRLADHVAQGSVSLDDVTVLALDEA 168

Query: 474 DRMLDMGFEPQIRKIIDQIRPDRQTLMWSATWPKEVRKLAEDYLXDYV 617
           D M D+GF PQ+  I+D+   D Q L++SAT   EV  L   YL D V
Sbjct: 169 DHMADLGFMPQVTTILDKTPADGQRLLFSATLDGEVDTLVRRYLRDPV 216


>UniRef50_Q2PZC2 Cluster: Vasa protein; n=3; Apidae|Rep: Vasa protein
            - Apis mellifera (Honeybee)
          Length = 630

 Score =  137 bits (331), Expect = 8e-31
 Identities = 99/303 (32%), Positives = 153/303 (50%), Gaps = 8/303 (2%)
 Frame = +3

Query: 105  LCQGKNLVGVAQTGSGKTLAYILPAIVHINNQPP----IRRGDGPIALVLAPTRELAQQI 272
            +  G++L+  AQTGSGKT A+ +P I  +  +            P  ++++PTREL  QI
Sbjct: 230  IMNGRDLMACAQTGSGKTAAFAVPIINTLLERSVDLVVTSTYCEPQVVIVSPTRELTIQI 289

Query: 273  QQVASEFGNSSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCT 452
             Q   +F  +S ++    +GG     Q   L  G  I++ATPGRL+DF+EKG        
Sbjct: 290  WQQIVKFSLNSILKTVVAYGGTSVMHQRGKLSAGCHILVATPGRLLDFVEKGRVKFSSVQ 349

Query: 453  YLVLDEADRMLDMGFEPQIRKIIDQ--IRP--DRQTLMWSATWPKEVRKLAEDYLXDYVQ 620
            +LVLDEADRMLDMGF P I K++D   + P  +RQTLM+SAT+P EV+ LA  +L +Y+ 
Sbjct: 350  FLVLDEADRMLDMGFLPSIEKMVDHETMVPLGERQTLMFSATFPDEVQHLARRFLNNYLF 409

Query: 621  INIGSLQLSANHNILQIVDVCQEHEKENKLNVLLQEIGQNQDPGARPLYLLKLKEKRXTX 800
            + +G +   A  ++ Q       ++K++ L  +L+    +   G   L  +++K+K    
Sbjct: 410  LAVGIVG-GACSDVEQNFYEVARNKKKDLLKEILERENDSGTLGG-TLVFVEMKKKADFI 467

Query: 801  PEISDDMDGQLCACTXTNTARKG*SXXPILKRVVSSILVATDVGCXRS*CGMGSNFXINF 980
                 + +    +       R+        K    SILVAT V   R       +  IN+
Sbjct: 468  AVFLSENNYPTTSIHGDRLQRQREEALADFKSGRMSILVATAVAA-RGLDIKNVSHVINY 526

Query: 981  DXP 989
            D P
Sbjct: 527  DLP 529


>UniRef50_Q978T9 Cluster: ATP-dependent RNA helicase; n=3;
           Thermoplasma|Rep: ATP-dependent RNA helicase -
           Thermoplasma volcanium
          Length = 373

 Score =  137 bits (331), Expect = 8e-31
 Identities = 69/164 (42%), Positives = 104/164 (63%)
 Frame = +3

Query: 114 GKNLVGVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVASEF 293
           G +LV  ++TGSGKT AY++P I +   +  IR      AL+L PTRELA Q+ +V+   
Sbjct: 39  GSDLVVRSKTGSGKTAAYLIPIINNTAKEKGIR------ALILLPTRELAVQVAKVSEAL 92

Query: 294 GNSSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEA 473
           G  S +R   V+GG    +Q   + RG  I++ TPGR +D +++G  N  + +Y VLDEA
Sbjct: 93  GKRSGIRTVVVYGGVSINKQIELILRGANIIVGTPGRTLDLIDRGILNFDKVSYFVLDEA 152

Query: 474 DRMLDMGFEPQIRKIIDQIRPDRQTLMWSATWPKEVRKLAEDYL 605
           D MLDMGF   I+KII+ +  +RQ+ ++SAT P E+ +LA+ ++
Sbjct: 153 DEMLDMGFIEDIKKIINVLPVERQSFLFSATIPSEIIELAKGFM 196


>UniRef50_Q9PGP6 Cluster: ATP-dependent RNA helicase; n=10; cellular
           organisms|Rep: ATP-dependent RNA helicase - Xylella
           fastidiosa
          Length = 614

 Score =  136 bits (330), Expect = 1e-30
 Identities = 74/185 (40%), Positives = 113/185 (61%), Gaps = 2/185 (1%)
 Frame = +3

Query: 102 SLCQGKNLVGVAQTGSGKTLAYILPAIVH-INNQPPIRRGDGPIALVLAPTRELAQQIQQ 278
           +L  G++++G AQTG+GKT A+ LP +   + NQ        P  LVLAPTRELA Q+ +
Sbjct: 48  ALLAGRDVLGQAQTGTGKTAAFALPLLTRTVLNQVK------PQVLVLAPTRELAIQVAE 101

Query: 279 VASEFGNS-SYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTY 455
               +  S S  R   V+GG    +Q   L+RGV +++ TPGR+ID LE+GT +L     
Sbjct: 102 AFQRYAASISGFRVLPVYGGQSYGQQLAALKRGVHVIVGTPGRVIDHLERGTLDLSELKT 161

Query: 456 LVLDEADRMLDMGFEPQIRKIIDQIRPDRQTLMWSATWPKEVRKLAEDYLXDYVQINIGS 635
           LVLDEAD ML MGF   + +++ ++   RQ  ++SAT P ++R++A+ YL D +++ I +
Sbjct: 162 LVLDEADEMLRMGFIEDVEEVLRKLPASRQVALFSATMPPQIRRIAQTYLQDPIEVTIAT 221

Query: 636 LQLSA 650
              +A
Sbjct: 222 KTTTA 226


>UniRef50_Q6MR64 Cluster: ATP-dependent RNA helicase; n=5; cellular
           organisms|Rep: ATP-dependent RNA helicase - Bdellovibrio
           bacteriovorus
          Length = 505

 Score =  136 bits (330), Expect = 1e-30
 Identities = 76/206 (36%), Positives = 118/206 (57%)
 Frame = +3

Query: 105 LCQGKNLVGVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVA 284
           + +G +L+G+AQTG+GKT A+ LP + +++          P  L+L PTRELA QI +  
Sbjct: 38  ILEGHDLLGIAQTGTGKTAAFSLPILQNLSKHTRKIEPKSPRCLILTPTRELAIQIHENI 97

Query: 285 SEFGNSSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVL 464
             +     +++  +FGG  +  Q R L+ GV+I+IATPGRL+D   +    L R    VL
Sbjct: 98  EAYSKHLNMKHAVIFGGVGQNPQVRALQGGVDILIATPGRLMDLHGQKHLKLDRVEIFVL 157

Query: 465 DEADRMLDMGFEPQIRKIIDQIRPDRQTLMWSATWPKEVRKLAEDYLXDYVQINIGSLQL 644
           DEADRMLDMGF   I+KI+  +   R  L +SAT P E++ LA   L +  ++ +  +  
Sbjct: 158 DEADRMLDMGFMQDIKKILPLLPQKRHNLFFSATMPHEIQTLANRILVNPKKVEVTPVSS 217

Query: 645 SANHNILQIVDVCQEHEKENKLNVLL 722
           +A     +++ V    +K  KL++LL
Sbjct: 218 TAEKVEQRVMFV----DKPQKLDLLL 239


>UniRef50_Q11TW3 Cluster: Possible ATP-dependent RNA helicase; n=5;
           Bacteria|Rep: Possible ATP-dependent RNA helicase -
           Cytophaga hutchinsonii (strain ATCC 33406 / NCIMB 9469)
          Length = 388

 Score =  136 bits (330), Expect = 1e-30
 Identities = 83/216 (38%), Positives = 129/216 (59%), Gaps = 2/216 (0%)
 Frame = +3

Query: 102 SLCQGKNLVGVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQV 281
           ++ +GK+++G+AQTGSGKT +++LP I+ +    P+ +     ALVL PTRELA Q+ QV
Sbjct: 42  AILKGKDILGIAQTGSGKTASFVLP-ILQMLQTKPLGKNRHINALVLVPTRELAVQVGQV 100

Query: 282 ASEFGNS--SYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTY 455
              F N+  + +++  V+GG     Q   L+ GVEI+IATPGRL+D ++     L     
Sbjct: 101 FQAFSNALPNKIKSLAVYGGVSINPQMIQLQ-GVEILIATPGRLLDLVDSKAVYLSDVEV 159

Query: 456 LVLDEADRMLDMGFEPQIRKIIDQIRPDRQTLMWSATWPKEVRKLAEDYLXDYVQINIGS 635
           LVLDEAD+ML++GF+ ++  I   +   RQ L++SAT  K+V  + E  L D V+I I +
Sbjct: 160 LVLDEADKMLNLGFKEEMANIFKLLPQKRQNLLFSATLGKDVDTITEFLLHDPVKIEIIA 219

Query: 636 LQLSANHNILQIVDVCQEHEKENKLNVLLQEIGQNQ 743
            + + +  I QI    ++  K   L  L++E   NQ
Sbjct: 220 EEQNID-LIQQIAYAVEDARKGPLLRYLIKEQKMNQ 254


>UniRef50_A1USG3 Cluster: DEAD/DEAH box helicase domain/helicase
           conserved C-terminal domain protein; n=2;
           Rhizobiales|Rep: DEAD/DEAH box helicase domain/helicase
           conserved C-terminal domain protein - Bartonella
           bacilliformis (strain ATCC 35685 / KC583)
          Length = 462

 Score =  136 bits (330), Expect = 1e-30
 Identities = 74/173 (42%), Positives = 104/173 (60%)
 Frame = +3

Query: 111 QGKNLVGVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVASE 290
           Q K+++G+AQTG+GKT +++LP +  +       R   P  L+L PTRELA Q+++   +
Sbjct: 42  QHKDVLGIAQTGTGKTASFVLPMLTLLEKGRAKARM--PRTLILEPTRELAAQVKENFDK 99

Query: 291 FGNSSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDE 470
           +G +  +    + GG     Q R LERG +++IATPGRL+D  E+GT  L     LV+DE
Sbjct: 100 YGINHRLNVALLIGGVSFDHQDRKLERGADVLIATPGRLLDHFERGTLLLMGVEILVIDE 159

Query: 471 ADRMLDMGFEPQIRKIIDQIRPDRQTLMWSATWPKEVRKLAEDYLXDYVQINI 629
           ADRMLDMGF P I +I       RQTL +SAT   E+ KL E +L   V + I
Sbjct: 160 ADRMLDMGFIPDIERICKLTPFTRQTLFFSATMAPEIIKLTEQFLHSPVCVEI 212


>UniRef50_Q185X0 Cluster: ATP-dependent RNA helicase; n=3;
           Clostridium difficile|Rep: ATP-dependent RNA helicase -
           Clostridium difficile (strain 630)
          Length = 497

 Score =  136 bits (329), Expect = 1e-30
 Identities = 75/215 (34%), Positives = 126/215 (58%)
 Frame = +3

Query: 105 LCQGKNLVGVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVA 284
           L +G+NLV  ++TGSGKT ++ +P   +IN        +   AL++ PTRELA Q++   
Sbjct: 37  LLKGQNLVVRSKTGSGKTASFAIPLCENINVDY-----NNIQALIVVPTRELALQVKDEI 91

Query: 285 SEFGNSSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVL 464
           S+ G    VR + +FG    ++Q  +L++ V IV+ATPGR++D + +G+  L+   YLV+
Sbjct: 92  SDIGRLKKVRCSAIFGKQSIKDQIAELKQRVHIVVATPGRILDHINRGSIKLENVKYLVI 151

Query: 465 DEADRMLDMGFEPQIRKIIDQIRPDRQTLMWSATWPKEVRKLAEDYLXDYVQINIGSLQL 644
           DEAD+M + GF  Q+ KI+  +  ++   ++SAT  +E++ + E Y+ DY  INI   + 
Sbjct: 152 DEADKMFNKGFVEQMEKILLNLPKEKIVSLFSATIDEEIKYICEKYMLDYSVINIEENES 211

Query: 645 SANHNILQIVDVCQEHEKENKLNVLLQEIGQNQDP 749
             N    QI D   +     K  +LL+E+  +++P
Sbjct: 212 DTNQKTRQIDDKIIKANGREKY-ILLKELIYSENP 245


>UniRef50_Q0BSI7 Cluster: ATP-dependent RNA helicase; n=12;
           Alphaproteobacteria|Rep: ATP-dependent RNA helicase -
           Granulobacter bethesdensis (strain ATCC BAA-1260 /
           CGDNIH1)
          Length = 763

 Score =  136 bits (329), Expect = 1e-30
 Identities = 79/210 (37%), Positives = 124/210 (59%), Gaps = 1/210 (0%)
 Frame = +3

Query: 114 GKNLVGVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVASEF 293
           G++++G AQTG+GKT ++ LP +  ++++    R   P +L+L PTRELA Q+ +   ++
Sbjct: 260 GRDVLGCAQTGTGKTASFTLPMMDILSDRRA--RARMPRSLILEPTRELALQVAENFVKY 317

Query: 294 GNSSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEA 473
           G    + +  + GG    +Q   L +GV+++IATPGRLID  ++G   L     LV+DEA
Sbjct: 318 GQYLKLNHALLIGGESMNDQRDVLSKGVDVLIATPGRLIDLFDRGGLLLTDTRILVIDEA 377

Query: 474 DRMLDMGFEPQIRKIIDQIRPDRQTLMWSATWPKEVRKLAEDYLXDYVQINIGSLQLSAN 653
           DRMLDMGF P + +I+  +  +RQTL +SAT   E+R+LA+ +L +  +I +     S  
Sbjct: 378 DRMLDMGFIPDVERIVSLLPHNRQTLFFSATMAPEIRRLADAFLQNPKEITVAK-PASVA 436

Query: 654 HNILQIVDVCQEHEKENKLNVLL-QEIGQN 740
             I   + +  E +K   L  LL QE  QN
Sbjct: 437 TTITSGLALVGEMDKRKALRHLLRQEKVQN 466


>UniRef50_A7JLA3 Cluster: ATP-dependent RNA helicase; n=20;
           Francisella|Rep: ATP-dependent RNA helicase -
           Francisella tularensis subsp. novicida GA99-3548
          Length = 569

 Score =  136 bits (329), Expect = 1e-30
 Identities = 78/208 (37%), Positives = 120/208 (57%), Gaps = 1/208 (0%)
 Frame = +3

Query: 105 LCQGKNLVGVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVA 284
           +  G++++G AQTG+GKT A+ LP I   NN     R   P  LVLAPTRELA Q+ +  
Sbjct: 41  ILSGRDVLGQAQTGTGKTAAFALPLI---NNMDLASRDRAPQVLVLAPTRELAIQVAEQF 97

Query: 285 SEFG-NSSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLV 461
             F  N   +   C++GG     Q R L++GV++V+ T GR++D +EKGT  L     LV
Sbjct: 98  EAFAKNVPNLDVACIYGGQEYGSQIRALKQGVKVVVGTTGRVMDHIEKGTLQLDNLRALV 157

Query: 462 LDEADRMLDMGFEPQIRKIIDQIRPDRQTLMWSATWPKEVRKLAEDYLXDYVQINIGSLQ 641
           LDEAD ML MGF   ++ ++  +  + Q L++SAT P ++  + E+YL +  +I + +  
Sbjct: 158 LDEADEMLRMGFIDDVKFVLSHVSDECQRLLFSATIPTDIADIIEEYLRNPCKIQVKAKT 217

Query: 642 LSANHNILQIVDVCQEHEKENKLNVLLQ 725
            +AN  + Q   V +   K + L+ LL+
Sbjct: 218 KTAN-TVTQKFIVIKGFRKIDALDRLLE 244


>UniRef50_Q11WD3 Cluster: Possible ATP-dependent RNA helicase; n=4;
           Sphingobacteriales|Rep: Possible ATP-dependent RNA
           helicase - Cytophaga hutchinsonii (strain ATCC 33406 /
           NCIMB 9469)
          Length = 463

 Score =  136 bits (328), Expect = 2e-30
 Identities = 67/172 (38%), Positives = 107/172 (62%)
 Frame = +3

Query: 114 GKNLVGVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVASEF 293
           G +++GVAQTG+GKT AY LP ++ I       +G  P A++  PTREL  QI+    + 
Sbjct: 42  GHDIIGVAQTGTGKTAAYALPILMKIK----YAQGHNPRAVIFGPTRELVMQIEIAMKQL 97

Query: 294 GNSSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEA 473
              + +R   ++GG   + Q   L++GV+I++ATPGR +D   +    L+    +VLDEA
Sbjct: 98  AKYTDLRIVALYGGIGPKLQKEHLQKGVDIIVATPGRFLDLYLEEEIVLKEVKTMVLDEA 157

Query: 474 DRMLDMGFEPQIRKIIDQIRPDRQTLMWSATWPKEVRKLAEDYLXDYVQINI 629
           D+M+DMGF PQ+RK+++ I   RQ L++SAT  + V +L E++L   ++I +
Sbjct: 158 DKMMDMGFMPQLRKMLEVIPRKRQNLLFSATMSERVERLTEEFLEYPMKIEV 209


>UniRef50_A2E9Y0 Cluster: DEAD/DEAH box helicase family protein;
           n=1; Trichomonas vaginalis G3|Rep: DEAD/DEAH box
           helicase family protein - Trichomonas vaginalis G3
          Length = 536

 Score =  136 bits (328), Expect = 2e-30
 Identities = 67/208 (32%), Positives = 126/208 (60%), Gaps = 4/208 (1%)
 Frame = +3

Query: 120 NLVGVAQTGSGKTLAYILPAIVHI----NNQPPIRRGDGPIALVLAPTRELAQQIQQVAS 287
           +++G++Q G+GKTLAY++P + +I     N P       P+++VL PT ELA Q+Q+V  
Sbjct: 179 DIIGLSQPGTGKTLAYVIPLLYYILEYKKNHPETNNFSIPLSVVLVPTHELAVQVQEVID 238

Query: 288 EFGNSSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLD 467
           + G +  +++  + G     +QA +L     +++ATPGRL D +E    ++++  ++V+D
Sbjct: 239 KLGINLGIKSRTLTGSFRLNDQALELSHENHVIVATPGRLKDAIEAHLVSVKKVFFIVMD 298

Query: 468 EADRMLDMGFEPQIRKIIDQIRPDRQTLMWSATWPKEVRKLAEDYLXDYVQINIGSLQLS 647
           EAD+M+D    PQI  I+++   ++  +M+SAT P EV  + E++    V +++G +   
Sbjct: 299 EADKMVDKSLGPQISFILNECPKEKHLMMFSATMPHEVLSIVEEFFTKVVTVSVGEIG-G 357

Query: 648 ANHNILQIVDVCQEHEKENKLNVLLQEI 731
           A+ NI Q+V  C++    ++L +LL+ +
Sbjct: 358 ASENIKQVVHYCRQ---ADRLGLLLKSL 382


>UniRef50_O54116 Cluster: Probable DEAD-box RNA helicase; n=10;
           Streptomyces|Rep: Probable DEAD-box RNA helicase -
           Streptomyces coelicolor
          Length = 498

 Score =  135 bits (327), Expect = 2e-30
 Identities = 71/168 (42%), Positives = 101/168 (60%)
 Frame = +3

Query: 114 GKNLVGVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVASEF 293
           G++++G  +TGSGKTLA+ L  +     +    R   P+ LVL PTRELAQQ+    + +
Sbjct: 106 GRDIMGRGRTGSGKTLAFGLALLARTAGRRAEPRQ--PLGLVLVPTRELAQQVTDALTPY 163

Query: 294 GNSSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEA 473
             S  +R   V GG     QA  L  G E+V+ATPGRL D +++G   L + +  VLDEA
Sbjct: 164 ARSVKLRLATVVGGMSIGRQASALRGGAEVVVATPGRLKDLIDRGDCRLNQVSVTVLDEA 223

Query: 474 DRMLDMGFEPQIRKIIDQIRPDRQTLMWSATWPKEVRKLAEDYLXDYV 617
           D+M DMGF PQ+  ++DQ+RP+ Q +++SAT  + V  L   YL D V
Sbjct: 224 DQMADMGFMPQVTALLDQVRPEGQRMLFSATLDRNVDLLVRRYLSDPV 271


>UniRef50_UPI0000DAE40A Cluster: hypothetical protein
           Rgryl_01000266; n=1; Rickettsiella grylli|Rep:
           hypothetical protein Rgryl_01000266 - Rickettsiella
           grylli
          Length = 433

 Score =  135 bits (326), Expect = 3e-30
 Identities = 86/231 (37%), Positives = 128/231 (55%), Gaps = 3/231 (1%)
 Frame = +3

Query: 42  SGIPRAAGNSARGTGSRXGQSLCQGKNLVGVAQTGSGKTLAYILPAIVHINNQPPIRRGD 221
           SGI      +A     +   ++ QG+++VG+AQTG+GKT AY LP +  +   PP     
Sbjct: 26  SGIQTQGYRTATPIQIKAIPAILQGRDVVGLAQTGTGKTAAYALPLLQQLTEGPP----- 80

Query: 222 GPI-ALVLAPTRELAQQIQQVASEFGNSSYVRNTCVFGGAPK-REQARDLERGVEIVIAT 395
           G + AL+L+PTR+LA QI    + FG  +++R   ++GG      Q + L  GV+I++A 
Sbjct: 81  GQLRALILSPTRDLADQICVAMNHFGRQTHLRCATIYGGKINYTRQYQLLTGGVDIIVAC 140

Query: 396 PGRLIDFLEKGTTN-LQRCTYLVLDEADRMLDMGFEPQIRKIIDQIRPDRQTLMWSATWP 572
           PGRL+D L+    N LQ+  +LVLDEAD + D GF   I  I+  + P RQ L++SAT  
Sbjct: 141 PGRLLDLLQGKKNNFLQQVKHLVLDEADHLFDHGFRDAIYHILKHLPPRRQNLLFSATMS 200

Query: 573 KEVRKLAEDYLXDYVQINIGSLQLSANHNILQIVDVCQEHEKENKLNVLLQ 725
            ++R L +  L   V+I IG  + +    I Q +    E  K N L  +LQ
Sbjct: 201 ADIRLLIDKVLHRPVRIQIGEPKPAV--TITQTLFPVSETLKVNLLETILQ 249


>UniRef50_Q0BUS0 Cluster: ATP-dependent RNA helicase; n=3;
           Rhodospirillales|Rep: ATP-dependent RNA helicase -
           Granulobacter bethesdensis (strain ATCC BAA-1260 /
           CGDNIH1)
          Length = 731

 Score =  135 bits (326), Expect = 3e-30
 Identities = 78/202 (38%), Positives = 116/202 (57%), Gaps = 1/202 (0%)
 Frame = +3

Query: 117 KNLVGVAQTGSGKTLAYILP-AIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVASEF 293
           ++L+  AQTGSGKT+AY L  A   +     + +   P+AL++APTRELA Q+QQ     
Sbjct: 81  RDLLVSAQTGSGKTVAYGLALADTLLGADERLGQAGAPLALIVAPTRELAMQVQQELLWL 140

Query: 294 GNSSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEA 473
              +  R     GG   R +A+ LERG  IV+ TPGRL D L +G  NL R   +VLDEA
Sbjct: 141 YGPAGARVVSCIGGMDARREAQALERGCHIVVGTPGRLCDHLGRGRLNLSRLRAVVLDEA 200

Query: 474 DRMLDMGFEPQIRKIIDQIRPDRQTLMWSATWPKEVRKLAEDYLXDYVQINIGSLQLSAN 653
           D MLD+GF  ++ +I+D    +R+TL++SAT  +E+  LA+ Y  + ++I+  S      
Sbjct: 201 DEMLDLGFRDELEEILDATPAERRTLLFSATIAREIAALAKRYQTNALRIDTVSRNKPHA 260

Query: 654 HNILQIVDVCQEHEKENKLNVL 719
               ++V V     + + +NVL
Sbjct: 261 DIDYRVVRVLPHEARHSVVNVL 282


>UniRef50_A6VTY7 Cluster: DEAD/DEAH box helicase domain protein;
           n=48; root|Rep: DEAD/DEAH box helicase domain protein -
           Marinomonas sp. MWYL1
          Length = 463

 Score =  135 bits (326), Expect = 3e-30
 Identities = 74/214 (34%), Positives = 123/214 (57%)
 Frame = +3

Query: 102 SLCQGKNLVGVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQV 281
           ++ +G++++  AQTG+GKT  + LP ++ I ++    + +   ALVL PTRELA Q+ + 
Sbjct: 38  AILEGQDVMAAAQTGTGKTAGFTLP-LLEILSKGENAQSNQVRALVLTPTRELAAQVAES 96

Query: 282 ASEFGNSSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLV 461
              +G    +++T VFGG     Q   L RG +I+IATPGR++D   +      +   LV
Sbjct: 97  VKNYGQHLSLKSTVVFGGVKINPQMMALRRGADILIATPGRMMDLYNQKAVRFDKLEVLV 156

Query: 462 LDEADRMLDMGFEPQIRKIIDQIRPDRQTLMWSATWPKEVRKLAEDYLXDYVQINIGSLQ 641
           LDEADRMLDMGF   I+KI+  +   RQ L++SAT+  E+R+LA+  + + ++I++    
Sbjct: 157 LDEADRMLDMGFIHDIKKILAILPKKRQNLLFSATFSPEIRQLAKGLVNNPIEISV---- 212

Query: 642 LSANHNILQIVDVCQEHEKENKLNVLLQEIGQNQ 743
              N   + +       +K+ K  +L+Q I   +
Sbjct: 213 TPRNATAVSVEQWLHPVDKKRKTELLIQLIADGR 246


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,262,426,781
Number of Sequences: 1657284
Number of extensions: 24807460
Number of successful extensions: 58395
Number of sequences better than 10.0: 500
Number of HSP's better than 10.0 without gapping: 51854
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 56161
length of database: 575,637,011
effective HSP length: 104
effective length of database: 403,279,475
effective search space used: 158488833675
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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