Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV30035X
         (555 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292381-1|CAL23193.2|  364|Tribolium castaneum gustatory recept...    24   1.0  
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    23   2.4  
EU019709-1|ABU25221.1|  540|Tribolium castaneum aspartate 1-deca...    21   5.5  
L01616-1|AAA30096.1|   74|Tribolium castaneum zinc finger protei...    21   9.5  
AY600514-1|AAT11862.1|  242|Tribolium castaneum iroquois-like pr...    21   9.5  
AF236856-1|AAG17563.2|  370|Tribolium castaneum Kruppel protein ...    21   9.5  

>AM292381-1|CAL23193.2|  364|Tribolium castaneum gustatory receptor
           candidate 60 protein.
          Length = 364

 Score = 23.8 bits (49), Expect = 1.0
 Identities = 9/22 (40%), Positives = 13/22 (59%)
 Frame = -1

Query: 453 MIFTNN*KSFCNPILQLDKKCV 388
           +I TNN   +C  ++ L K CV
Sbjct: 238 IILTNNQAKYCTTLIGLIKNCV 259


>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
           candidate 46 protein.
          Length = 1451

 Score = 22.6 bits (46), Expect = 2.4
 Identities = 10/31 (32%), Positives = 16/31 (51%)
 Frame = -3

Query: 199 FK*CIIIHLQYLSMNNYLACLHHLNVISCIF 107
           F  C ++ +Q    NNY +  H+L V   +F
Sbjct: 505 FDYCTVLRVQ--RFNNYQSLAHYLRVFFTVF 533


>EU019709-1|ABU25221.1|  540|Tribolium castaneum aspartate
           1-decarboxylase protein.
          Length = 540

 Score = 21.4 bits (43), Expect = 5.5
 Identities = 9/26 (34%), Positives = 15/26 (57%)
 Frame = -3

Query: 496 DELNSALDFLERKNDDIHQQLKELLQ 419
           +EL   +DF  R     H++L E+L+
Sbjct: 95  EELRRLMDFGVRSAPSTHEELLEVLK 120


>L01616-1|AAA30096.1|   74|Tribolium castaneum zinc finger protein
           protein.
          Length = 74

 Score = 20.6 bits (41), Expect = 9.5
 Identities = 8/19 (42%), Positives = 11/19 (57%)
 Frame = -2

Query: 113 HIYVSRNEK*HLVEHCSQK 57
           H+ V   E+ +  EHCS K
Sbjct: 56  HLRVHTGERPYGCEHCSMK 74


>AY600514-1|AAT11862.1|  242|Tribolium castaneum iroquois-like
           protein protein.
          Length = 242

 Score = 20.6 bits (41), Expect = 9.5
 Identities = 7/32 (21%), Positives = 18/32 (56%)
 Frame = -3

Query: 466 ERKNDDIHQQLKELLQSNIAIRQEMREENKDV 371
           +RK+D +   +  +L +   ++ EM+  ++ V
Sbjct: 205 DRKDDLLGNNMHHILGNTFGLKPEMKTSDRGV 236


>AF236856-1|AAG17563.2|  370|Tribolium castaneum Kruppel protein
           protein.
          Length = 370

 Score = 20.6 bits (41), Expect = 9.5
 Identities = 8/19 (42%), Positives = 11/19 (57%)
 Frame = -2

Query: 113 HIYVSRNEK*HLVEHCSQK 57
           H+ V   E+ +  EHCS K
Sbjct: 209 HLRVHTGERPYGCEHCSMK 227


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 120,048
Number of Sequences: 336
Number of extensions: 2559
Number of successful extensions: 6
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 13725787
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)