Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV10402
         (773 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292370-1|CAL23182.1|  418|Tribolium castaneum gustatory recept...    25   0.89 
AM292335-1|CAL23147.2|  374|Tribolium castaneum gustatory recept...    25   0.89 
AM292330-1|CAL23142.2|  408|Tribolium castaneum gustatory recept...    23   3.6  
EU019713-1|ABU25225.1|  528|Tribolium castaneum chitin deacetyla...    22   6.3  
EU019712-1|ABU25224.1|  535|Tribolium castaneum chitin deacetyla...    22   6.3  
DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome ad...    21   8.3  

>AM292370-1|CAL23182.1|  418|Tribolium castaneum gustatory receptor
           candidate 49 protein.
          Length = 418

 Score = 24.6 bits (51), Expect = 0.89
 Identities = 15/46 (32%), Positives = 26/46 (56%), Gaps = 4/46 (8%)
 Frame = +1

Query: 319 VPLRLSYG--GLVL--VSHLYTVISRFCVLDQYLSYFFLSVIFNRF 444
           +PL L Y   G++   +S  ++ +SRF  L  Y  +F+LS I+  +
Sbjct: 53  LPLTLLYKLLGIIQFPISAHFSFMSRFLCLPFYSYFFYLSYIYTTY 98


>AM292335-1|CAL23147.2|  374|Tribolium castaneum gustatory receptor
           candidate 14 protein.
          Length = 374

 Score = 24.6 bits (51), Expect = 0.89
 Identities = 15/46 (32%), Positives = 26/46 (56%), Gaps = 4/46 (8%)
 Frame = +1

Query: 319 VPLRLSYG--GLVL--VSHLYTVISRFCVLDQYLSYFFLSVIFNRF 444
           +PL L Y   G++   +S  ++ +SRF  L  Y  +F+LS I+  +
Sbjct: 9   LPLTLLYKLLGIIQFPISAHFSFMSRFLCLPFYSYFFYLSYIYTTY 54


>AM292330-1|CAL23142.2|  408|Tribolium castaneum gustatory receptor
           candidate 9 protein.
          Length = 408

 Score = 22.6 bits (46), Expect = 3.6
 Identities = 14/41 (34%), Positives = 19/41 (46%), Gaps = 1/41 (2%)
 Frame = +1

Query: 367 YTVISRFC-VLDQYLSYFFLSVIFNRFVCQIYYANFSRFKL 486
           Y  +   C +LD+ LSY  L+   N F   I+   F  F L
Sbjct: 271 YNRLCHLCFLLDEKLSYIILTSFLNNFYFIIFQV-FESFYL 310


>EU019713-1|ABU25225.1|  528|Tribolium castaneum chitin deacetylase
           2B protein.
          Length = 528

 Score = 21.8 bits (44), Expect = 6.3
 Identities = 9/25 (36%), Positives = 13/25 (52%)
 Frame = -3

Query: 564 SNTLIGEKIQRFLNHYTGRYIRFNQ 490
           SN   GE+  R L H   R++  N+
Sbjct: 385 SNIQTGEQFARLLRHNFNRHLNSNR 409


>EU019712-1|ABU25224.1|  535|Tribolium castaneum chitin deacetylase
           2A protein.
          Length = 535

 Score = 21.8 bits (44), Expect = 6.3
 Identities = 9/25 (36%), Positives = 13/25 (52%)
 Frame = -3

Query: 564 SNTLIGEKIQRFLNHYTGRYIRFNQ 490
           SN   GE+  R L H   R++  N+
Sbjct: 392 SNIQTGEQFARLLRHNFNRHLNSNR 416


>DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome
           adhesion molecule splicevariant 3.12.3.1 protein.
          Length = 1639

 Score = 21.4 bits (43), Expect = 8.3
 Identities = 7/14 (50%), Positives = 9/14 (64%)
 Frame = -3

Query: 213 GGRYSPSATQHALN 172
           GGR+ P   +HA N
Sbjct: 408 GGRFEPPQIRHAFN 421


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 183,958
Number of Sequences: 336
Number of extensions: 4084
Number of successful extensions: 13
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 20857569
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)