Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS20113
         (750 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292380-1|CAL23192.2|  489|Tribolium castaneum gustatory recept...    24   1.1  
AM292352-1|CAL23164.1|  250|Tribolium castaneum gustatory recept...    24   1.1  
AM292354-1|CAL23166.1|  321|Tribolium castaneum gustatory recept...    23   2.6  
AM292346-1|CAL23158.2|  314|Tribolium castaneum gustatory recept...    23   3.4  
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    22   6.0  

>AM292380-1|CAL23192.2|  489|Tribolium castaneum gustatory receptor
           candidate 59 protein.
          Length = 489

 Score = 24.2 bits (50), Expect = 1.1
 Identities = 11/49 (22%), Positives = 27/49 (55%), Gaps = 2/49 (4%)
 Frame = -3

Query: 172 TKVKSFFLFIILYHTIPTI--ILFLYTISYIVIYKMHTLCMHQYTKNIC 32
           T  +  + +I+LY T+  +  ++ +   +++V+ K     ++QY K +C
Sbjct: 159 TTWRCLYRWIVLY-TLSKMSQVMLIQFCAFVVVLKQKFCVVNQYIKQVC 206


>AM292352-1|CAL23164.1|  250|Tribolium castaneum gustatory receptor
           candidate 31 protein.
          Length = 250

 Score = 24.2 bits (50), Expect = 1.1
 Identities = 20/80 (25%), Positives = 35/80 (43%)
 Frame = -3

Query: 253 IEVSIRANTAGSVEDLPFYQLDYN*YFTKVKSFFLFIILYHTIPTIILFLYTISYIVIYK 74
           I VSI  +++   +   FY+  Y+  FT +       IL H I     F +T   + I  
Sbjct: 52  IAVSIFGSSSFEADLRQFYKTAYSAIFTVIDFSLCKAILVHAITIRSTFSWTFIDVFIML 111

Query: 73  MHTLCMHQYTKNICIKIKMV 14
             T  + +  K +  K++M+
Sbjct: 112 TSTAFVFR-LKQLNAKVEML 130


>AM292354-1|CAL23166.1|  321|Tribolium castaneum gustatory receptor
           candidate 33 protein.
          Length = 321

 Score = 23.0 bits (47), Expect = 2.6
 Identities = 10/16 (62%), Positives = 12/16 (75%)
 Frame = -1

Query: 357 GTSPHHFISNVYILLA 310
           GT   +FISNVY +LA
Sbjct: 56  GTDLSYFISNVYQILA 71


>AM292346-1|CAL23158.2|  314|Tribolium castaneum gustatory receptor
           candidate 25 protein.
          Length = 314

 Score = 22.6 bits (46), Expect = 3.4
 Identities = 6/28 (21%), Positives = 16/28 (57%)
 Frame = -3

Query: 115 ILFLYTISYIVIYKMHTLCMHQYTKNIC 32
           ++ +   +++V+ K     ++QY K +C
Sbjct: 4   VMLIQFCAFVVVLKQKFCVVNQYIKQVC 31


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 21.8 bits (44), Expect = 6.0
 Identities = 10/37 (27%), Positives = 19/37 (51%)
 Frame = -3

Query: 157 FFLFIILYHTIPTIILFLYTISYIVIYKMHTLCMHQY 47
           +F +  +  T+   +LFL  I Y V+     LC++ +
Sbjct: 115 YFYYAFIIFTVH--LLFLLCIYYFVVPLFFLLCIYYF 149


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 175,041
Number of Sequences: 336
Number of extensions: 3992
Number of successful extensions: 8
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 20027417
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)