Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS20101
         (797 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    24   1.6  
AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.     22   4.9  
AJ850293-1|CAH64513.1|  539|Tribolium castaneum putative esteras...    21   8.6  

>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10
           protein.
          Length = 2700

 Score = 23.8 bits (49), Expect = 1.6
 Identities = 11/26 (42%), Positives = 14/26 (53%), Gaps = 1/26 (3%)
 Frame = +3

Query: 375 CNRIRQ*KWESSRRSQPTCG-HIYHG 449
           CNRIR  +W  +R +    G   YHG
Sbjct: 910 CNRIRNQRWIVNRDTSGATGPFAYHG 935


>AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.
          Length = 697

 Score = 22.2 bits (45), Expect = 4.9
 Identities = 8/13 (61%), Positives = 10/13 (76%)
 Frame = +2

Query: 146 VTVPDDGFSLFAF 184
           VTVPD GF++  F
Sbjct: 580 VTVPDGGFTIIRF 592


>AJ850293-1|CAH64513.1|  539|Tribolium castaneum putative esterase
          protein.
          Length = 539

 Score = 21.4 bits (43), Expect = 8.6
 Identities = 6/18 (33%), Positives = 14/18 (77%)
 Frame = +2

Query: 35 KIIILSVLVTICSAQPRA 88
          +++ L++ +T+C A+P A
Sbjct: 2  RVVPLAIFLTLCHAEPIA 19


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 195,063
Number of Sequences: 336
Number of extensions: 4508
Number of successful extensions: 10
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 21687721
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)