Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS20015
         (627 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292359-1|CAL23171.2|  436|Tribolium castaneum gustatory recept...    23   2.1  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    21   6.4  
AM292352-1|CAL23164.1|  250|Tribolium castaneum gustatory recept...    21   6.4  
AM292362-1|CAL23174.2|  398|Tribolium castaneum gustatory recept...    21   8.4  

>AM292359-1|CAL23171.2|  436|Tribolium castaneum gustatory receptor
           candidate 38 protein.
          Length = 436

 Score = 23.0 bits (47), Expect = 2.1
 Identities = 9/27 (33%), Positives = 15/27 (55%)
 Frame = -2

Query: 407 VVIFNVKSCHFKIHPYNPLSYVNFSIF 327
           +V+ ++   HFKI    P  Y+N  I+
Sbjct: 200 MVVTHITMAHFKIIQVVPYCYINCLIY 226


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 21.4 bits (43), Expect = 6.4
 Identities = 6/12 (50%), Positives = 9/12 (75%)
 Frame = +3

Query: 3    HENCSKFFIIYN 38
            HE+CS F++  N
Sbjct: 1215 HESCSSFYVCVN 1226


>AM292352-1|CAL23164.1|  250|Tribolium castaneum gustatory receptor
           candidate 31 protein.
          Length = 250

 Score = 21.4 bits (43), Expect = 6.4
 Identities = 7/21 (33%), Positives = 15/21 (71%)
 Frame = -3

Query: 88  YNHDQVY*IALYINNTLLYIM 26
           Y H ++Y +++ I+N + YI+
Sbjct: 146 YEHYRLYQLSVLIDNNMSYII 166


>AM292362-1|CAL23174.2|  398|Tribolium castaneum gustatory receptor
           candidate 41 protein.
          Length = 398

 Score = 21.0 bits (42), Expect = 8.4
 Identities = 10/23 (43%), Positives = 14/23 (60%)
 Frame = -3

Query: 85  NHDQVY*IALYINNTLLYIMKNL 17
           N   VY + LYI  +LLY++  L
Sbjct: 265 NVSVVYVLILYILESLLYMVTKL 287


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 140,202
Number of Sequences: 336
Number of extensions: 3195
Number of successful extensions: 5
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 16083914
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)