Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS00009
(689 letters)
Database: tribolium
336 sequences; 122,585 total letters
Searching.......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY043293-2|AAK96034.1| 353|Tribolium castaneum homeodomain tran... 24 1.3
AF231104-1|AAF64149.1| 142|Tribolium castaneum labial protein p... 24 1.3
AF231103-1|AAF64148.1| 142|Tribolium castaneum labial protein p... 24 1.3
EF222292-1|ABN79652.1| 354|Tribolium castaneum cardioactive pep... 23 1.8
AM292360-1|CAL23172.2| 427|Tribolium castaneum gustatory recept... 23 2.4
AM292331-1|CAL23143.2| 437|Tribolium castaneum gustatory recept... 23 2.4
AF322227-1|AAK01654.1| 782|Tribolium castaneum cell surface pro... 23 2.4
AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ... 21 9.5
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ... 21 9.5
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ... 21 9.5
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ... 21 9.5
AM292364-1|CAL23176.2| 353|Tribolium castaneum gustatory recept... 21 9.5
>AY043293-2|AAK96034.1| 353|Tribolium castaneum homeodomain
transcription factor Labialprotein.
Length = 353
Score = 23.8 bits (49), Expect = 1.3
Identities = 17/50 (34%), Positives = 21/50 (42%)
Frame = -3
Query: 405 PPFFPMRDLCMCGMTPPPAIVAFMRLSNSSSPLIASCKCRGVIRFTFKSL 256
P FP +P PA + SN+SS L +C G FT K L
Sbjct: 216 PAEFPTTSSSSALESPNPASRSSCLGSNTSSMLSLNCLNTGRTNFTNKQL 265
Score = 23.8 bits (49), Expect = 1.3
Identities = 10/20 (50%), Positives = 13/20 (65%)
Frame = -3
Query: 369 GMTPPPAIVAFMRLSNSSSP 310
G+ PP I A + SNS+SP
Sbjct: 315 GLIPPEPISASLSTSNSNSP 334
>AF231104-1|AAF64149.1| 142|Tribolium castaneum labial protein
protein.
Length = 142
Score = 23.8 bits (49), Expect = 1.3
Identities = 17/50 (34%), Positives = 21/50 (42%)
Frame = -3
Query: 405 PPFFPMRDLCMCGMTPPPAIVAFMRLSNSSSPLIASCKCRGVIRFTFKSL 256
P FP +P PA + SN+SS L +C G FT K L
Sbjct: 5 PAEFPTTSSSSALESPNPASRSSCLGSNTSSMLSLNCLNTGRTNFTNKQL 54
Score = 23.8 bits (49), Expect = 1.3
Identities = 10/20 (50%), Positives = 13/20 (65%)
Frame = -3
Query: 369 GMTPPPAIVAFMRLSNSSSP 310
G+ PP I A + SNS+SP
Sbjct: 104 GLIPPEPISASLSTSNSNSP 123
>AF231103-1|AAF64148.1| 142|Tribolium castaneum labial protein
protein.
Length = 142
Score = 23.8 bits (49), Expect = 1.3
Identities = 17/50 (34%), Positives = 21/50 (42%)
Frame = -3
Query: 405 PPFFPMRDLCMCGMTPPPAIVAFMRLSNSSSPLIASCKCRGVIRFTFKSL 256
P FP +P PA + SN+SS L +C G FT K L
Sbjct: 5 PAEFPTTSSSSALESPNPASRSSCLGSNTSSMLSLNCLNTGRTNFTNKQL 54
Score = 23.8 bits (49), Expect = 1.3
Identities = 10/20 (50%), Positives = 13/20 (65%)
Frame = -3
Query: 369 GMTPPPAIVAFMRLSNSSSP 310
G+ PP I A + SNS+SP
Sbjct: 104 GLIPPEPISASLSTSNSNSP 123
>EF222292-1|ABN79652.1| 354|Tribolium castaneum cardioactive
peptide receptor 2 protein.
Length = 354
Score = 23.4 bits (48), Expect = 1.8
Identities = 9/29 (31%), Positives = 16/29 (55%)
Frame = +3
Query: 342 QLSLAEASSHTYTNLSLERKAVLVHPFNF 428
Q + +S++ LS++R + HP NF
Sbjct: 126 QAVVTYSSTYVLVALSIDRYDAITHPMNF 154
>AM292360-1|CAL23172.2| 427|Tribolium castaneum gustatory receptor
candidate 39 protein.
Length = 427
Score = 23.0 bits (47), Expect = 2.4
Identities = 10/32 (31%), Positives = 17/32 (53%)
Frame = +1
Query: 382 ISHWKERRSWCTRLILSTYCLRVFLTPILSRY 477
+SH ++ + S YCL + LT I++ Y
Sbjct: 266 LSHMMQQLGKAYSGMYSMYCLLILLTTIVASY 297
>AM292331-1|CAL23143.2| 437|Tribolium castaneum gustatory receptor
candidate 10 protein.
Length = 437
Score = 23.0 bits (47), Expect = 2.4
Identities = 10/32 (31%), Positives = 17/32 (53%)
Frame = +1
Query: 382 ISHWKERRSWCTRLILSTYCLRVFLTPILSRY 477
+SH ++ + S YCL + LT I++ Y
Sbjct: 266 LSHMMQQLGKAYSGMYSMYCLLILLTTIVASY 297
>AF322227-1|AAK01654.1| 782|Tribolium castaneum cell surface
protein chaoptin protein.
Length = 782
Score = 23.0 bits (47), Expect = 2.4
Identities = 8/24 (33%), Positives = 17/24 (70%)
Frame = -3
Query: 669 ELHNIDIRQITINLLENGSVGKMQ 598
+L ++++ I + +LE+G+ KMQ
Sbjct: 539 QLEELNLKNIDLTVLESGAFCKMQ 562
>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
variant 2 protein.
Length = 1558
Score = 21.0 bits (42), Expect = 9.5
Identities = 8/15 (53%), Positives = 11/15 (73%)
Frame = +3
Query: 432 YVLLKSVFNSYFEQV 476
YVLL ++F SYF +
Sbjct: 379 YVLLINIFASYFAYI 393
>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
variant 1 protein.
Length = 1558
Score = 21.0 bits (42), Expect = 9.5
Identities = 8/15 (53%), Positives = 11/15 (73%)
Frame = +3
Query: 432 YVLLKSVFNSYFEQV 476
YVLL ++F SYF +
Sbjct: 379 YVLLINIFASYFAYI 393
>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase
CHS1B protein.
Length = 1558
Score = 21.0 bits (42), Expect = 9.5
Identities = 8/15 (53%), Positives = 11/15 (73%)
Frame = +3
Query: 432 YVLLKSVFNSYFEQV 476
YVLL ++F SYF +
Sbjct: 379 YVLLINIFASYFAYI 393
>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase
CHS1A protein.
Length = 1558
Score = 21.0 bits (42), Expect = 9.5
Identities = 8/15 (53%), Positives = 11/15 (73%)
Frame = +3
Query: 432 YVLLKSVFNSYFEQV 476
YVLL ++F SYF +
Sbjct: 379 YVLLINIFASYFAYI 393
>AM292364-1|CAL23176.2| 353|Tribolium castaneum gustatory receptor
candidate 43 protein.
Length = 353
Score = 21.0 bits (42), Expect = 9.5
Identities = 8/29 (27%), Positives = 16/29 (55%)
Frame = +3
Query: 453 FNSYFEQVPTFILYFTLAGFVKYLNNIMF 539
+NS F F+++F F+ ++ IM+
Sbjct: 214 YNSAFGWPIAFLIFFATLDFLDNVDTIMY 242
Database: tribolium
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 122,585
Number of sequences in database: 336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 156,451
Number of Sequences: 336
Number of extensions: 3371
Number of successful extensions: 15
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18114270
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -