Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS00007
         (575 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292379-1|CAL23191.2|  376|Tribolium castaneum gustatory recept...    23   1.9  
DQ414247-1|ABD63009.2|  414|Tribolium castaneum paired protein.        21   5.7  
AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr...    21   5.7  
AY769608-1|AAV40984.1|  195|Tribolium castaneum heat shock prote...    21   7.5  

>AM292379-1|CAL23191.2|  376|Tribolium castaneum gustatory receptor
           candidate 58 protein.
          Length = 376

 Score = 23.0 bits (47), Expect = 1.9
 Identities = 9/26 (34%), Positives = 15/26 (57%)
 Frame = +1

Query: 463 ICAMCGKKILDTKNYSRAQLSLLLCY 540
           + AMCG  ++     S +Q ++ LCY
Sbjct: 285 LVAMCGLVLICDSAKSESQQTVFLCY 310


>DQ414247-1|ABD63009.2|  414|Tribolium castaneum paired protein.
          Length = 414

 Score = 21.4 bits (43), Expect = 5.7
 Identities = 10/42 (23%), Positives = 21/42 (50%)
 Frame = -1

Query: 347 AVNALFSPTTRPPDSTVFLAPAFQGSGVITLPISFRTSHKPF 222
           A N++ +PT     + ++ +P    S    LP++   +H P+
Sbjct: 306 AFNSVATPTPTSVMTELYPSPVPGHSTSPNLPLTHNIAHNPY 347


>AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like
           protein protein.
          Length = 1156

 Score = 21.4 bits (43), Expect = 5.7
 Identities = 13/36 (36%), Positives = 15/36 (41%)
 Frame = -1

Query: 410 FVLQILHC*NVEVYGLNRPFLAVNALFSPTTRPPDS 303
           FV  I  C      G N+     NAL S    PP+S
Sbjct: 649 FVDHIRQCVGGGTIGSNQRNFLKNALMSNNILPPES 684


>AY769608-1|AAV40984.1|  195|Tribolium castaneum heat shock protein
           70 protein.
          Length = 195

 Score = 21.0 bits (42), Expect = 7.5
 Identities = 8/24 (33%), Positives = 15/24 (62%)
 Frame = +3

Query: 330 KQSINRQKRTI*SVHFHISTVQNL 401
           ++ + + KR + SVH    T++NL
Sbjct: 91  RREVEKAKRDLSSVHKTTLTIENL 114


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 130,433
Number of Sequences: 336
Number of extensions: 2937
Number of successful extensions: 4
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 14308417
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)