Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS00005
         (439 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory recept...    22   2.2  
AY293621-1|AAP46162.1|  392|Tribolium castaneum glass protein pr...    22   2.9  
AJ223614-1|CAA11490.1|  301|Tribolium castaneum orthodenticle-2 ...    21   3.9  
X72339-1|CAA51066.1|  133|Tribolium castaneum abdominal protein.       21   6.8  
AF017415-2|AAB70263.1|  284|Tribolium castaneum abdominal-A prot...    21   6.8  
AF017415-1|AAB70262.1|  343|Tribolium castaneum abdominal-AII pr...    21   6.8  

>AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory receptor
           candidate 61 protein.
          Length = 670

 Score = 22.2 bits (45), Expect = 2.2
 Identities = 7/17 (41%), Positives = 10/17 (58%)
 Frame = -1

Query: 430 CYCAFRRSLYPFARLVW 380
           CYC +  S+ P + L W
Sbjct: 554 CYCYYSISIRPISTLGW 570


>AY293621-1|AAP46162.1|  392|Tribolium castaneum glass protein
           protein.
          Length = 392

 Score = 21.8 bits (44), Expect = 2.9
 Identities = 9/25 (36%), Positives = 16/25 (64%)
 Frame = -1

Query: 250 CSEDIVNSDCSDVGCFTIPT*GLEP 176
           C++D+ +    D+G F++P   LEP
Sbjct: 33  CTDDLSSCWSEDMGSFSLPL-DLEP 56


>AJ223614-1|CAA11490.1|  301|Tribolium castaneum orthodenticle-2
           protein protein.
          Length = 301

 Score = 21.4 bits (43), Expect = 3.9
 Identities = 9/23 (39%), Positives = 13/23 (56%)
 Frame = +3

Query: 18  SNLSRFNAGNNYHSVFGEGGDTS 86
           SN+   ++    HS FG G +TS
Sbjct: 260 SNMDYLSSSTMSHSQFGNGLETS 282


>X72339-1|CAA51066.1|  133|Tribolium castaneum abdominal protein.
          Length = 133

 Score = 20.6 bits (41), Expect = 6.8
 Identities = 6/6 (100%), Positives = 6/6 (100%)
 Frame = +1

Query: 79  IHQHHH 96
           IHQHHH
Sbjct: 104 IHQHHH 109


>AF017415-2|AAB70263.1|  284|Tribolium castaneum abdominal-A
           protein.
          Length = 284

 Score = 20.6 bits (41), Expect = 6.8
 Identities = 6/6 (100%), Positives = 6/6 (100%)
 Frame = +1

Query: 79  IHQHHH 96
           IHQHHH
Sbjct: 255 IHQHHH 260


>AF017415-1|AAB70262.1|  343|Tribolium castaneum abdominal-AII
           protein.
          Length = 343

 Score = 20.6 bits (41), Expect = 6.8
 Identities = 6/6 (100%), Positives = 6/6 (100%)
 Frame = +1

Query: 79  IHQHHH 96
           IHQHHH
Sbjct: 314 IHQHHH 319


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 85,302
Number of Sequences: 336
Number of extensions: 1404
Number of successful extensions: 6
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 52
effective length of database: 105,113
effective search space used:  9775509
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)