Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ps4M0067.Seq
         (825 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292370-1|CAL23182.1|  418|Tribolium castaneum gustatory recept...    25   0.73 
AM292335-1|CAL23147.2|  374|Tribolium castaneum gustatory recept...    25   0.73 
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    24   1.7  
AY531877-1|AAT08872.1|  247|Tribolium castaneum ORF1p protein.         23   2.9  
AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.    23   3.9  
AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.    23   3.9  
DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulati...    22   6.8  
AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory recept...    21   9.0  
AF225975-2|AAF74116.1|  302|Tribolium castaneum Tc-tailless prot...    21   9.0  
AF219117-1|AAF71999.1|  406|Tribolium castaneum tailless ortholo...    21   9.0  

>AM292370-1|CAL23182.1|  418|Tribolium castaneum gustatory receptor
           candidate 49 protein.
          Length = 418

 Score = 25.0 bits (52), Expect = 0.73
 Identities = 10/37 (27%), Positives = 23/37 (62%)
 Frame = -3

Query: 727 RLEINCSINIMFTYNILLQIFCLYYIIK*IAFLLTRT 617
           R E   ++ +++T+N+    FC Y+++  +A + +RT
Sbjct: 306 RQEDTDTLVVIYTFNLFYLCFCFYWLLVMVA-MFSRT 341


>AM292335-1|CAL23147.2|  374|Tribolium castaneum gustatory receptor
           candidate 14 protein.
          Length = 374

 Score = 25.0 bits (52), Expect = 0.73
 Identities = 10/37 (27%), Positives = 23/37 (62%)
 Frame = -3

Query: 727 RLEINCSINIMFTYNILLQIFCLYYIIK*IAFLLTRT 617
           R E   ++ +++T+N+    FC Y+++  +A + +RT
Sbjct: 262 RQEDTDTLVVIYTFNLFYLCFCFYWLLVMVA-MFSRT 297


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 23.8 bits (49), Expect = 1.7
 Identities = 10/25 (40%), Positives = 17/25 (68%)
 Frame = -3

Query: 700 IMFTYNILLQIFCLYYIIK*IAFLL 626
           I+FT ++L  + C+YY +  + FLL
Sbjct: 121 IIFTVHLLF-LLCIYYFVVPLFFLL 144


>AY531877-1|AAT08872.1|  247|Tribolium castaneum ORF1p protein.
          Length = 247

 Score = 23.0 bits (47), Expect = 2.9
 Identities = 9/13 (69%), Positives = 11/13 (84%)
 Frame = -2

Query: 419 QTRRNPEWRMRTT 381
           QTRRNP +R RT+
Sbjct: 226 QTRRNPYYRPRTS 238


>AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.
          Length = 712

 Score = 22.6 bits (46), Expect = 3.9
 Identities = 6/15 (40%), Positives = 11/15 (73%)
 Frame = -3

Query: 328 CSNTSSGTSYSHCRC 284
           C+  ++ T +SHC+C
Sbjct: 140 CTPNATNTVWSHCQC 154


>AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.
          Length = 717

 Score = 22.6 bits (46), Expect = 3.9
 Identities = 6/15 (40%), Positives = 11/15 (73%)
 Frame = -3

Query: 328 CSNTSSGTSYSHCRC 284
           C+  ++ T +SHC+C
Sbjct: 140 CTPNATNTVWSHCQC 154


>DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulation
           protein.
          Length = 947

 Score = 21.8 bits (44), Expect = 6.8
 Identities = 8/14 (57%), Positives = 10/14 (71%)
 Frame = -3

Query: 388 EQLLLEGGVPGIAD 347
           EQ+L EGG P + D
Sbjct: 837 EQILAEGGCPNLYD 850


>AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory receptor
           candidate 53 protein.
          Length = 659

 Score = 21.4 bits (43), Expect = 9.0
 Identities = 8/24 (33%), Positives = 16/24 (66%)
 Frame = +3

Query: 468 LSKLFTFKNTTTAIYI*GFSVYYL 539
           LSK+ +F N T +  +  F++Y++
Sbjct: 38  LSKIRSFLNITASAVLLPFAIYHI 61


>AF225975-2|AAF74116.1|  302|Tribolium castaneum Tc-tailless
           protein.
          Length = 302

 Score = 21.4 bits (43), Expect = 9.0
 Identities = 12/43 (27%), Positives = 17/43 (39%)
 Frame = -3

Query: 328 CSNTSSGTSYSHCRCTSTNEFGSRVMSLVTDVVWKDRTAESCV 200
           C + SSG  Y+   C     F  R +      V K +   SC+
Sbjct: 41  CGDFSSGKHYNIFACDGCAGFFKRSIRRNRQYVCKAKDEGSCI 83


>AF219117-1|AAF71999.1|  406|Tribolium castaneum tailless ortholog
           protein.
          Length = 406

 Score = 21.4 bits (43), Expect = 9.0
 Identities = 12/43 (27%), Positives = 17/43 (39%)
 Frame = -3

Query: 328 CSNTSSGTSYSHCRCTSTNEFGSRVMSLVTDVVWKDRTAESCV 200
           C + SSG  Y+   C     F  R +      V K +   SC+
Sbjct: 41  CGDFSSGKHYNIFACDGCAGFFKRSIRRNRQYVCKAKDEGSCI 83


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 198,743
Number of Sequences: 336
Number of extensions: 4520
Number of successful extensions: 16
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 22621642
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)