Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ps4M0032.Seq
         (843 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY316682-1|AAQ83696.1|  456|Tribolium castaneum Sp-like zinc fin...    28   0.080
EF222292-1|ABN79652.1|  354|Tribolium castaneum cardioactive pep...    22   5.3  
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    22   5.3  

>AY316682-1|AAQ83696.1|  456|Tribolium castaneum Sp-like zinc finger
           protein protein.
          Length = 456

 Score = 28.3 bits (60), Expect = 0.080
 Identities = 10/23 (43%), Positives = 14/23 (60%)
 Frame = -3

Query: 499 CKRLDSKSGGPFVEADYGRGLHP 431
           C +L +KS  P  +A  G+G HP
Sbjct: 44  CNKLSNKSPPPLADAAVGKGFHP 66


>EF222292-1|ABN79652.1|  354|Tribolium castaneum cardioactive
           peptide receptor 2 protein.
          Length = 354

 Score = 22.2 bits (45), Expect = 5.3
 Identities = 13/46 (28%), Positives = 21/46 (45%)
 Frame = -2

Query: 548 PRAHAPLRWADDLRDMLQKIGFEKRRTVR*SGLWERPTSSSREIQV 411
           P  H P+R  DD RD   +   E+  T R S     P +  + +++
Sbjct: 242 PVGHIPIRQCDDHRDRPPRHFHEEHDTRRASSRGIIPRAKIKTVKM 287


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 22.2 bits (45), Expect = 5.3
 Identities = 8/21 (38%), Positives = 13/21 (61%)
 Frame = +2

Query: 50  FFYCYRMTTNEPIT*LIVNGY 112
           +FYC  +T N  +  L+ +GY
Sbjct: 58  YFYCVSITFNVHLLFLLCSGY 78


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 180,620
Number of Sequences: 336
Number of extensions: 3836
Number of successful extensions: 4
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 23244256
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)