Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= prgv0019
         (692 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292379-1|CAL23191.2|  376|Tribolium castaneum gustatory recept...    26   0.25 
AM292377-1|CAL23189.2|  358|Tribolium castaneum gustatory recept...    25   0.59 
AM292342-1|CAL23154.2|  386|Tribolium castaneum gustatory recept...    25   0.59 
AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.      24   1.0  
AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.      24   1.0  
AY531876-2|AAT08871.1|  340|Tribolium castaneum tyrosine recombi...    22   5.5  
DQ659251-1|ABG47449.1|  366|Tribolium castaneum chitinase 11 pro...    21   7.2  
AM292355-1|CAL23167.1|  324|Tribolium castaneum gustatory recept...    21   7.2  

>AM292379-1|CAL23191.2|  376|Tribolium castaneum gustatory receptor
           candidate 58 protein.
          Length = 376

 Score = 26.2 bits (55), Expect = 0.25
 Identities = 21/69 (30%), Positives = 34/69 (49%), Gaps = 1/69 (1%)
 Frame = +3

Query: 117 LLSFLVSTDVFFTRVIEVKFLNIKHSFTI*SRVY-FIDFIKWFEYFHVVDSLRDNEIKTN 293
           ++  LV+ + FFT  +E+  L +KH   I S V   I  +       + DS + +E +  
Sbjct: 248 VIKILVALN-FFTSTLEIDNLYLKHKLEISSLVQTAITLVAMCGLVLICDSAK-SESQQT 305

Query: 294 NFLCRLLLE 320
            FLC  L+E
Sbjct: 306 VFLCYKLME 314


>AM292377-1|CAL23189.2|  358|Tribolium castaneum gustatory receptor
           candidate 56 protein.
          Length = 358

 Score = 25.0 bits (52), Expect = 0.59
 Identities = 12/41 (29%), Positives = 22/41 (53%)
 Frame = +3

Query: 216 YFIDFIKWFEYFHVVDSLRDNEIKTNNFLCRLLLETKQGNI 338
           YFI+ +   +Y H ++ LR      N +L  L+ ET + ++
Sbjct: 188 YFINLLMELQYCHYLNILRVRYQLLNEYLETLVQETNRTSV 228


>AM292342-1|CAL23154.2|  386|Tribolium castaneum gustatory receptor
           candidate 21 protein.
          Length = 386

 Score = 25.0 bits (52), Expect = 0.59
 Identities = 12/41 (29%), Positives = 22/41 (53%)
 Frame = +3

Query: 216 YFIDFIKWFEYFHVVDSLRDNEIKTNNFLCRLLLETKQGNI 338
           YFI+ +   +Y H ++ LR      N +L  L+ ET + ++
Sbjct: 188 YFINLLMELQYCHYLNILRVRYQLLNEYLETLVQETNRTSV 228


>AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.
          Length = 790

 Score = 24.2 bits (50), Expect = 1.0
 Identities = 13/29 (44%), Positives = 16/29 (55%)
 Frame = -3

Query: 648 DFRILNFITIEKRCITY*LLTTFDYFIIN 562
           D RILN +  +K   TY   T FD  I+N
Sbjct: 408 DNRILNNLLDKKPYSTYKFPTNFDALIVN 436


>AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.
          Length = 682

 Score = 24.2 bits (50), Expect = 1.0
 Identities = 13/29 (44%), Positives = 16/29 (55%)
 Frame = -3

Query: 648 DFRILNFITIEKRCITY*LLTTFDYFIIN 562
           D RILN +  +K   TY   T FD  I+N
Sbjct: 300 DNRILNNLLDKKPYSTYKFPTNFDALIVN 328


>AY531876-2|AAT08871.1|  340|Tribolium castaneum tyrosine
           recombinase protein.
          Length = 340

 Score = 21.8 bits (44), Expect = 5.5
 Identities = 13/41 (31%), Positives = 20/41 (48%)
 Frame = +3

Query: 411 HEGKSVKTMNKISSC*IRQHSRKVTKQSDYEKSLKTLTRIK 533
           H+G S  T+N   S      S +V K    ++ L+ + RIK
Sbjct: 88  HQGASYNTLNTCRSALALLLSPEVGKDHRIKRFLRGVYRIK 128


>DQ659251-1|ABG47449.1|  366|Tribolium castaneum chitinase 11
           protein.
          Length = 366

 Score = 21.4 bits (43), Expect = 7.2
 Identities = 10/33 (30%), Positives = 15/33 (45%)
 Frame = -3

Query: 411 VKLCILSSILFYQMRGCRVRQIY*ICFLVSSLG 313
           +KLC+L+S L         +    +CF  S  G
Sbjct: 3   LKLCLLASALLISTHQTEAKTDKILCFFASWAG 35


>AM292355-1|CAL23167.1|  324|Tribolium castaneum gustatory receptor
           candidate 34 protein.
          Length = 324

 Score = 21.4 bits (43), Expect = 7.2
 Identities = 8/32 (25%), Positives = 18/32 (56%)
 Frame = +1

Query: 217 ILLILSSGSNTFMSLIVYATTRLKLIISYVAY 312
           +L+ILSS    ++    Y    + +++ ++AY
Sbjct: 36  LLVILSSIDRPYLKSYTYIKLVVSVLMDFIAY 67


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 151,241
Number of Sequences: 336
Number of extensions: 3110
Number of successful extensions: 9
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18218375
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)