Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS301C09f
         (315 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ...    30   0.005
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ...    30   0.005
EF222295-1|ABN79655.1|  146|Tribolium castaneum arginine vasopre...    21   3.1  
AJ518941-1|CAD57735.1|  456|Tribolium castaneum homothorax protein.    21   4.0  
AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ...    20   5.4  
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ...    20   5.4  
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ...    20   5.4  
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ...    20   5.4  
L01617-1|AAA30097.1|   46|Tribolium castaneum zinc finger protei...    20   7.1  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    19   9.4  

>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
           protein.
          Length = 1464

 Score = 30.3 bits (65), Expect = 0.005
 Identities = 19/52 (36%), Positives = 29/52 (55%)
 Frame = +1

Query: 70  WWFIFLKMASVATVTRALLGKNVLNKCKVVSATSQASIKFYSTASYENIKVE 225
           W   FLK+ ++ TV   +LG  V++K   +  TSQ  IK   T +Y N K++
Sbjct: 55  WGVKFLKVVTIITVFFVVLGAAVVSKGTTLFMTSQ--IKKNVTRAYCNKKID 104


>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase
           CHS2 protein.
          Length = 1464

 Score = 30.3 bits (65), Expect = 0.005
 Identities = 19/52 (36%), Positives = 29/52 (55%)
 Frame = +1

Query: 70  WWFIFLKMASVATVTRALLGKNVLNKCKVVSATSQASIKFYSTASYENIKVE 225
           W   FLK+ ++ TV   +LG  V++K   +  TSQ  IK   T +Y N K++
Sbjct: 55  WGVKFLKVVTIITVFFVVLGAAVVSKGTTLFMTSQ--IKKNVTRAYCNKKID 104


>EF222295-1|ABN79655.1|  146|Tribolium castaneum arginine
           vasopressin-like peptide protein.
          Length = 146

 Score = 21.0 bits (42), Expect = 3.1
 Identities = 9/24 (37%), Positives = 12/24 (50%)
 Frame = +3

Query: 90  NGFCRYCNSCFAGKECTEQVQSGI 161
           +G C   +SC A K C    +S I
Sbjct: 107 DGICCSQDSCHADKSCASDDKSPI 130


>AJ518941-1|CAD57735.1|  456|Tribolium castaneum homothorax protein.
          Length = 456

 Score = 20.6 bits (41), Expect = 4.0
 Identities = 7/20 (35%), Positives = 10/20 (50%)
 Frame = +1

Query: 7   HECHTRRCLCPYH*YCINPS 66
           H  H    + PYH   +NP+
Sbjct: 41  HSPHLNHAMHPYHANHVNPT 60


>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
            variant 2 protein.
          Length = 1558

 Score = 20.2 bits (40), Expect = 5.4
 Identities = 8/39 (20%), Positives = 19/39 (48%)
 Frame = +1

Query: 28   CLCPYH*YCINPSTWWFIFLKMASVATVTRALLGKNVLN 144
            CL P   +CI P   + + +    +  +  +++  NV++
Sbjct: 1020 CLHPQEFWCIVPGIIYLLSIPSMYLLLILYSIINLNVVS 1058


>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
            variant 1 protein.
          Length = 1558

 Score = 20.2 bits (40), Expect = 5.4
 Identities = 8/39 (20%), Positives = 19/39 (48%)
 Frame = +1

Query: 28   CLCPYH*YCINPSTWWFIFLKMASVATVTRALLGKNVLN 144
            CL P   +CI P   + + +    +  +  +++  NV++
Sbjct: 1020 CLHPQEFWCIVPGIIYLLSIPSMYLLLILYSIINLNVVS 1058


>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase CHS1B
            protein.
          Length = 1558

 Score = 20.2 bits (40), Expect = 5.4
 Identities = 8/39 (20%), Positives = 19/39 (48%)
 Frame = +1

Query: 28   CLCPYH*YCINPSTWWFIFLKMASVATVTRALLGKNVLN 144
            CL P   +CI P   + + +    +  +  +++  NV++
Sbjct: 1020 CLHPQEFWCIVPGIIYLLSIPSMYLLLILYSIINLNVVS 1058


>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase CHS1A
            protein.
          Length = 1558

 Score = 20.2 bits (40), Expect = 5.4
 Identities = 8/39 (20%), Positives = 19/39 (48%)
 Frame = +1

Query: 28   CLCPYH*YCINPSTWWFIFLKMASVATVTRALLGKNVLN 144
            CL P   +CI P   + + +    +  +  +++  NV++
Sbjct: 1020 CLHPQEFWCIVPGIIYLLSIPSMYLLLILYSIINLNVVS 1058


>L01617-1|AAA30097.1|   46|Tribolium castaneum zinc finger protein
           protein.
          Length = 46

 Score = 19.8 bits (39), Expect = 7.1
 Identities = 6/9 (66%), Positives = 6/9 (66%)
 Frame = +3

Query: 99  CRYCNSCFA 125
           C YCN  FA
Sbjct: 38  CTYCNRAFA 46


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 19.4 bits (38), Expect = 9.4
 Identities = 5/5 (100%), Positives = 5/5 (100%)
 Frame = +1

Query: 61   PSTWW 75
            PSTWW
Sbjct: 1039 PSTWW 1043


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 72,430
Number of Sequences: 336
Number of extensions: 1374
Number of successful extensions: 10
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 122,585
effective HSP length: 49
effective length of database: 106,121
effective search space used:  5836655
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 38 (20.3 bits)