Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS301C08f
         (346 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY884064-1|AAX84205.1|  683|Tribolium castaneum pro-phenol oxida...    20   6.2  
AM292361-1|CAL23173.2|  373|Tribolium castaneum gustatory recept...    20   6.2  
EF125543-1|ABL73927.1|  475|Tribolium castaneum chitinase 4 prot...    20   8.2  
AM292326-1|CAL23138.2|  522|Tribolium castaneum gustatory recept...    20   8.2  

>AY884064-1|AAX84205.1|  683|Tribolium castaneum pro-phenol oxidase
           subunit 2 protein.
          Length = 683

 Score = 20.2 bits (40), Expect = 6.2
 Identities = 6/14 (42%), Positives = 10/14 (71%)
 Frame = -3

Query: 281 LPKHSRCEGRVLSL 240
           +PKH R  GR++ +
Sbjct: 84  IPKHRRIAGRLIDI 97


>AM292361-1|CAL23173.2|  373|Tribolium castaneum gustatory receptor
           candidate 40 protein.
          Length = 373

 Score = 20.2 bits (40), Expect = 6.2
 Identities = 7/27 (25%), Positives = 12/27 (44%)
 Frame = +2

Query: 260 HSGCASAXVAEITVRWLPCTSRWRSVE 340
           HS   S   +++  RW    + W  +E
Sbjct: 101 HSFMTSVLFSQVASRWPLFLNEWTKIE 127


>EF125543-1|ABL73927.1|  475|Tribolium castaneum chitinase 4
           protein.
          Length = 475

 Score = 19.8 bits (39), Expect = 8.2
 Identities = 9/28 (32%), Positives = 15/28 (53%)
 Frame = +1

Query: 208 VEEVSRQVAQVKLSTRPSQRLCFGXCCR 291
           VEEV+++ +  K    PS+ L    C +
Sbjct: 397 VEEVTQKPSSTKAPAPPSRDLTTTLCTK 424


>AM292326-1|CAL23138.2|  522|Tribolium castaneum gustatory receptor
           candidate 5 protein.
          Length = 522

 Score = 19.8 bits (39), Expect = 8.2
 Identities = 8/23 (34%), Positives = 15/23 (65%)
 Frame = +1

Query: 85  YQKVSPRKLVYFTNIKGLLATIS 153
           Y+K+SP +L+  T +  LL  ++
Sbjct: 56  YKKLSPMRLIVQTCLDFLLLALN 78


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 86,495
Number of Sequences: 336
Number of extensions: 1664
Number of successful extensions: 12
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 122,585
effective HSP length: 50
effective length of database: 105,785
effective search space used:  6770240
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 38 (20.3 bits)