Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= maV30026
(311 letters)
Database: tribolium
336 sequences; 122,585 total letters
Searching.......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY074761-1|AAL71874.1| 314|Tribolium castaneum ultrabithorax pr... 20 5.3
AM292378-1|CAL23190.2| 387|Tribolium castaneum gustatory recept... 20 5.3
AF017415-2|AAB70263.1| 284|Tribolium castaneum abdominal-A prot... 20 5.3
AF017415-1|AAB70262.1| 343|Tribolium castaneum abdominal-AII pr... 20 5.3
AF017414-2|AAB70261.1| 150|Tribolium castaneum abdominal-A prot... 20 5.3
AF017414-1|AAB70260.1| 209|Tribolium castaneum abdominal-AII pr... 20 5.3
EU008544-1|ABS31131.1| 493|Tribolium castaneum cytochrome P450 ... 19 9.2
AY362543-1|AAQ63455.1| 677|Tribolium castaneum chitin synthase ... 19 9.2
AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ... 19 9.2
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ... 19 9.2
AM292340-1|CAL23152.1| 355|Tribolium castaneum gustatory recept... 19 9.2
>AY074761-1|AAL71874.1| 314|Tribolium castaneum ultrabithorax
protein.
Length = 314
Score = 20.2 bits (40), Expect = 5.3
Identities = 10/26 (38%), Positives = 16/26 (61%)
Frame = +3
Query: 96 AFKTKLSISWL*IWNTRTYSSEPLGT 173
A +T S+SW + + SS+P+GT
Sbjct: 170 AGRTGNSLSWNNPCSINSTSSQPVGT 195
>AM292378-1|CAL23190.2| 387|Tribolium castaneum gustatory receptor
candidate 57 protein.
Length = 387
Score = 20.2 bits (40), Expect = 5.3
Identities = 10/33 (30%), Positives = 14/33 (42%)
Frame = -3
Query: 216 NCIANRWQRPNYLKACLKVHLNKSLYSISTTRI 118
NC R R NY C V ++Y ++ I
Sbjct: 215 NCYDLRRVRKNYNSICELVDAFNNIYGLAMLEI 247
>AF017415-2|AAB70263.1| 284|Tribolium castaneum abdominal-A
protein.
Length = 284
Score = 20.2 bits (40), Expect = 5.3
Identities = 11/33 (33%), Positives = 16/33 (48%)
Frame = +3
Query: 147 TYSSEPLGTLSNS*VFATDSQCSFTADNYREVT 245
++SS L+ + ATD C +TA VT
Sbjct: 30 SFSSTASSALAAAVDAATDKSCRYTAGLAANVT 62
>AF017415-1|AAB70262.1| 343|Tribolium castaneum abdominal-AII
protein.
Length = 343
Score = 20.2 bits (40), Expect = 5.3
Identities = 11/33 (33%), Positives = 16/33 (48%)
Frame = +3
Query: 147 TYSSEPLGTLSNS*VFATDSQCSFTADNYREVT 245
++SS L+ + ATD C +TA VT
Sbjct: 89 SFSSTASSALAAAVDAATDKSCRYTAGLAANVT 121
>AF017414-2|AAB70261.1| 150|Tribolium castaneum abdominal-A
protein.
Length = 150
Score = 20.2 bits (40), Expect = 5.3
Identities = 11/33 (33%), Positives = 16/33 (48%)
Frame = +3
Query: 147 TYSSEPLGTLSNS*VFATDSQCSFTADNYREVT 245
++SS L+ + ATD C +TA VT
Sbjct: 30 SFSSTASSALAAAVDAATDKSCRYTAGLAANVT 62
>AF017414-1|AAB70260.1| 209|Tribolium castaneum abdominal-AII
protein.
Length = 209
Score = 20.2 bits (40), Expect = 5.3
Identities = 11/33 (33%), Positives = 16/33 (48%)
Frame = +3
Query: 147 TYSSEPLGTLSNS*VFATDSQCSFTADNYREVT 245
++SS L+ + ATD C +TA VT
Sbjct: 89 SFSSTASSALAAAVDAATDKSCRYTAGLAANVT 121
>EU008544-1|ABS31131.1| 493|Tribolium castaneum cytochrome P450
protein.
Length = 493
Score = 19.4 bits (38), Expect = 9.2
Identities = 6/14 (42%), Positives = 11/14 (78%)
Frame = +1
Query: 202 IRNAVSPLITTGKL 243
+R +SP+ T+GK+
Sbjct: 126 LRTKLSPVFTSGKM 139
>AY362543-1|AAQ63455.1| 677|Tribolium castaneum chitin synthase
protein.
Length = 677
Score = 19.4 bits (38), Expect = 9.2
Identities = 9/21 (42%), Positives = 12/21 (57%)
Frame = -1
Query: 77 WDAPENSNCVMVISVQEILIS 15
W EN+ + +I V ILIS
Sbjct: 1 WPLVENNPTLYLIPVSVILIS 21
>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
protein.
Length = 1464
Score = 19.4 bits (38), Expect = 9.2
Identities = 9/21 (42%), Positives = 12/21 (57%)
Frame = -1
Query: 77 WDAPENSNCVMVISVQEILIS 15
W EN+ + +I V ILIS
Sbjct: 234 WPLVENNPTLYLIPVSVILIS 254
>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase
CHS2 protein.
Length = 1464
Score = 19.4 bits (38), Expect = 9.2
Identities = 9/21 (42%), Positives = 12/21 (57%)
Frame = -1
Query: 77 WDAPENSNCVMVISVQEILIS 15
W EN+ + +I V ILIS
Sbjct: 234 WPLVENNPTLYLIPVSVILIS 254
>AM292340-1|CAL23152.1| 355|Tribolium castaneum gustatory receptor
candidate 19 protein.
Length = 355
Score = 19.4 bits (38), Expect = 9.2
Identities = 11/48 (22%), Positives = 18/48 (37%)
Frame = +1
Query: 85 CSYSLLRLSFLYPGCRYGIQGLIQVNL*ARFQIVRSLPPIRNAVSPLI 228
C Y R ++P Y L + +VR P ++P+I
Sbjct: 297 CIYYFCRAFIIFPTHFYCAFSLYPLKSTFYLNVVRPFPERSMGITPMI 344
Database: tribolium
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 122,585
Number of sequences in database: 336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 67,762
Number of Sequences: 336
Number of extensions: 1155
Number of successful extensions: 11
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 122,585
effective HSP length: 49
effective length of database: 106,121
effective search space used: 5730534
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 38 (20.3 bits)
- SilkBase 1999-2023 -