Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS30049
         (782 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF468474-1|ABR25244.1|  516|Tribolium castaneum methoprene-toler...    22   4.8  
AJ888865-1|CAI61930.1|  108|Tribolium castaneum modulator of act...    21   8.4  
AJ622939-1|CAF22091.1|  108|Tribolium castaneum ETS activity mod...    21   8.4  

>EF468474-1|ABR25244.1|  516|Tribolium castaneum methoprene-tolerant
           protein.
          Length = 516

 Score = 22.2 bits (45), Expect = 4.8
 Identities = 8/13 (61%), Positives = 10/13 (76%)
 Frame = -2

Query: 373 LPKHIQQYVLFHL 335
           LPKH+ QY+L  L
Sbjct: 95  LPKHVDQYLLEQL 107


>AJ888865-1|CAI61930.1|  108|Tribolium castaneum modulator of
           activity of ets genes protein.
          Length = 108

 Score = 21.4 bits (43), Expect = 8.4
 Identities = 8/28 (28%), Positives = 14/28 (50%)
 Frame = -2

Query: 409 DHDDYPHRPLPFLPKHIQQYVLFHLQLH 326
           D D+ P  P  +  +H+ Q++    Q H
Sbjct: 28  DEDNLPKDPRQWTREHVAQWINLVTQQH 55


>AJ622939-1|CAF22091.1|  108|Tribolium castaneum ETS activity
           modulator protein.
          Length = 108

 Score = 21.4 bits (43), Expect = 8.4
 Identities = 8/28 (28%), Positives = 14/28 (50%)
 Frame = -2

Query: 409 DHDDYPHRPLPFLPKHIQQYVLFHLQLH 326
           D D+ P  P  +  +H+ Q++    Q H
Sbjct: 28  DEDNLPKDPRQWTREHVAQWINLVTQQH 55


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 176,328
Number of Sequences: 336
Number of extensions: 3590
Number of successful extensions: 5
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 21168876
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)