Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS30047
         (641 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF017415-2|AAB70263.1|  284|Tribolium castaneum abdominal-A prot...    23   2.1  
AF017415-1|AAB70262.1|  343|Tribolium castaneum abdominal-AII pr...    23   2.1  
AF017414-2|AAB70261.1|  150|Tribolium castaneum abdominal-A prot...    23   2.1  
AF017414-1|AAB70260.1|  209|Tribolium castaneum abdominal-AII pr...    23   2.1  
AM292322-1|CAL23134.1|  373|Tribolium castaneum gustatory recept...    22   3.7  
DQ659248-1|ABG47446.1|  496|Tribolium castaneum chitinase 8 prot...    22   4.9  
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    21   8.6  
AM292324-1|CAL23136.1|  398|Tribolium castaneum gustatory recept...    21   8.6  

>AF017415-2|AAB70263.1|  284|Tribolium castaneum abdominal-A
           protein.
          Length = 284

 Score = 23.0 bits (47), Expect = 2.1
 Identities = 8/27 (29%), Positives = 17/27 (62%)
 Frame = -3

Query: 426 ITSASERISTIHIYYHQFCTRLVEPTN 346
           +++AS  ++    +YHQ  + +V+P N
Sbjct: 88  VSAASASMAVAAQFYHQAASAVVDPLN 114


>AF017415-1|AAB70262.1|  343|Tribolium castaneum abdominal-AII
           protein.
          Length = 343

 Score = 23.0 bits (47), Expect = 2.1
 Identities = 8/27 (29%), Positives = 17/27 (62%)
 Frame = -3

Query: 426 ITSASERISTIHIYYHQFCTRLVEPTN 346
           +++AS  ++    +YHQ  + +V+P N
Sbjct: 147 VSAASASMAVAAQFYHQAASAVVDPLN 173


>AF017414-2|AAB70261.1|  150|Tribolium castaneum abdominal-A
           protein.
          Length = 150

 Score = 23.0 bits (47), Expect = 2.1
 Identities = 8/27 (29%), Positives = 17/27 (62%)
 Frame = -3

Query: 426 ITSASERISTIHIYYHQFCTRLVEPTN 346
           +++AS  ++    +YHQ  + +V+P N
Sbjct: 88  VSAASASMAVAAQFYHQAASAVVDPLN 114


>AF017414-1|AAB70260.1|  209|Tribolium castaneum abdominal-AII
           protein.
          Length = 209

 Score = 23.0 bits (47), Expect = 2.1
 Identities = 8/27 (29%), Positives = 17/27 (62%)
 Frame = -3

Query: 426 ITSASERISTIHIYYHQFCTRLVEPTN 346
           +++AS  ++    +YHQ  + +V+P N
Sbjct: 147 VSAASASMAVAAQFYHQAASAVVDPLN 173


>AM292322-1|CAL23134.1|  373|Tribolium castaneum gustatory receptor
           candidate 1 protein.
          Length = 373

 Score = 22.2 bits (45), Expect = 3.7
 Identities = 12/33 (36%), Positives = 20/33 (60%)
 Frame = -2

Query: 496 LE*ICKLIGG*KKDKGVTIILKFHNKRFRTNQH 398
           +E I KLI    K + V++I+ + N+R R+  H
Sbjct: 103 IEFINKLIEFDVKLQNVSLIINYENQRTRSRIH 135


>DQ659248-1|ABG47446.1|  496|Tribolium castaneum chitinase 8
           protein.
          Length = 496

 Score = 21.8 bits (44), Expect = 4.9
 Identities = 8/22 (36%), Positives = 14/22 (63%)
 Frame = -2

Query: 433 KFHNKRFRTNQHNPYLLSSILY 368
           ++ N RF  +  +PYL + I+Y
Sbjct: 37  RWGNGRFTVDHIDPYLCTHIIY 58


>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
           candidate 46 protein.
          Length = 1451

 Score = 21.0 bits (42), Expect = 8.6
 Identities = 12/31 (38%), Positives = 15/31 (48%)
 Frame = -3

Query: 249 FLYIECTRKERFNLKTLL*RNIIRSVQIVLF 157
           F+   CTR    + K L+  NII  V  V F
Sbjct: 26  FVTFTCTRSNFRSSKLLILYNIILQVLFVSF 56


>AM292324-1|CAL23136.1|  398|Tribolium castaneum gustatory receptor
           candidate 3 protein.
          Length = 398

 Score = 21.0 bits (42), Expect = 8.6
 Identities = 12/31 (38%), Positives = 15/31 (48%)
 Frame = -3

Query: 249 FLYIECTRKERFNLKTLL*RNIIRSVQIVLF 157
           F+   CTR    + K L+  NII  V  V F
Sbjct: 44  FVTFTCTRSNFRSSKLLILYNIILQVLFVSF 74


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 112,919
Number of Sequences: 336
Number of extensions: 2114
Number of successful extensions: 8
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 16448590
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)