Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS30012
         (485 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY884063-1|AAX84204.1|  682|Tribolium castaneum pro-phenol oxida...    21   4.5  
EF222293-1|ABN79653.1|  434|Tribolium castaneum ecdysis triggeri...    21   5.9  
AM292378-1|CAL23190.2|  387|Tribolium castaneum gustatory recept...    21   5.9  
AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory recept...    21   7.9  
AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory recept...    21   7.9  
AM292345-1|CAL23157.2|  384|Tribolium castaneum gustatory recept...    21   7.9  
AM292339-1|CAL23151.2|  387|Tribolium castaneum gustatory recept...    21   7.9  
AM292338-1|CAL23150.2|  372|Tribolium castaneum gustatory recept...    21   7.9  

>AY884063-1|AAX84204.1|  682|Tribolium castaneum pro-phenol oxidase
           subunit 1 protein.
          Length = 682

 Score = 21.4 bits (43), Expect = 4.5
 Identities = 10/37 (27%), Positives = 17/37 (45%)
 Frame = -3

Query: 399 DNIHKYMCFEIGEIEFQTLVYTQRRGLPSYIHLIKIK 289
           D ++ Y+ +    +       TQ   LPS+IH+   K
Sbjct: 116 DRVNPYLFYYAFSVALLHRPDTQNLDLPSFIHVFPDK 152


>EF222293-1|ABN79653.1|  434|Tribolium castaneum ecdysis triggering
           hormone receptorisoform A protein.
          Length = 434

 Score = 21.0 bits (42), Expect = 5.9
 Identities = 7/14 (50%), Positives = 10/14 (71%)
 Frame = -3

Query: 183 YNVWSFCNIIEYLH 142
           YN+  FC I+ YL+
Sbjct: 330 YNILYFCRIMVYLN 343


>AM292378-1|CAL23190.2|  387|Tribolium castaneum gustatory receptor
           candidate 57 protein.
          Length = 387

 Score = 21.0 bits (42), Expect = 5.9
 Identities = 12/47 (25%), Positives = 23/47 (48%)
 Frame = -1

Query: 230 YNTIH*LHYSEHLLFDTMFGHFVILSSTYTFNEIQIFV*YELRQFRN 90
           YN+I  L  + + ++       +I+  TY  N   +F+ Y + + RN
Sbjct: 226 YNSICELVDAFNNIYGLAMLEIIIVVITYVLNLTDLFLVYGMSKSRN 272


>AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory receptor
           candidate 53 protein.
          Length = 659

 Score = 20.6 bits (41), Expect = 7.9
 Identities = 8/34 (23%), Positives = 18/34 (52%)
 Frame = +2

Query: 143 CRYSIILQNDQTLYRIINVLNNGVNGLCYIKAYI 244
           C Y+    +   +Y+  N++  G+N +  + A+I
Sbjct: 336 CVYTTATYDSFMIYKTTNIIILGLNVVYVVTAWI 369


>AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory receptor
           candidate 51 protein.
          Length = 771

 Score = 20.6 bits (41), Expect = 7.9
 Identities = 8/23 (34%), Positives = 13/23 (56%)
 Frame = -2

Query: 478 FXXYISFYTDFNIDIFLCGTRII 410
           F   I+    FNI++FLC   ++
Sbjct: 264 FLYTINGQGQFNIEMFLCNMSLL 286


>AM292345-1|CAL23157.2|  384|Tribolium castaneum gustatory receptor
           candidate 24 protein.
          Length = 384

 Score = 20.6 bits (41), Expect = 7.9
 Identities = 8/34 (23%), Positives = 18/34 (52%)
 Frame = +2

Query: 143 CRYSIILQNDQTLYRIINVLNNGVNGLCYIKAYI 244
           C Y+    +   +Y+  N++  G+N +  + A+I
Sbjct: 61  CVYTTATYDSFMIYKTTNIIILGLNVVYVVTAWI 94


>AM292339-1|CAL23151.2|  387|Tribolium castaneum gustatory receptor
           candidate 18 protein.
          Length = 387

 Score = 20.6 bits (41), Expect = 7.9
 Identities = 9/31 (29%), Positives = 17/31 (54%)
 Frame = -1

Query: 263 KRFTNPKYMLLYNTIH*LHYSEHLLFDTMFG 171
           K++   +   ++ T   L +  HL+FDT+ G
Sbjct: 118 KKYLEKRNRHIFRTSVLLIFVMHLMFDTLGG 148


>AM292338-1|CAL23150.2|  372|Tribolium castaneum gustatory receptor
           candidate 17 protein.
          Length = 372

 Score = 20.6 bits (41), Expect = 7.9
 Identities = 9/31 (29%), Positives = 17/31 (54%)
 Frame = -1

Query: 263 KRFTNPKYMLLYNTIH*LHYSEHLLFDTMFG 171
           K++   +   ++ T   L +  HL+FDT+ G
Sbjct: 118 KKYLEKRNRHIFRTSVLLIFVMHLMFDTLGG 148


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 110,897
Number of Sequences: 336
Number of extensions: 2495
Number of successful extensions: 9
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 11315916
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)