Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS00033
         (763 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY043292-1|AAK96031.1|  323|Tribolium castaneum homeodomain tran...    25   0.87 
AF228509-1|AAF69136.1|  325|Tribolium castaneum prothoraxless pr...    25   0.87 
DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome ad...    24   1.5  
AY675073-1|AAV74190.1|  533|Tribolium castaneum chitinase 5 prot...    23   2.0  
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    21   8.1  

>AY043292-1|AAK96031.1|  323|Tribolium castaneum homeodomain
           transcription factor Prothoraxlessprotein.
          Length = 323

 Score = 24.6 bits (51), Expect = 0.87
 Identities = 10/24 (41%), Positives = 12/24 (50%)
 Frame = +3

Query: 408 QADHPRQVQRHHQVAGFQPAGRQG 479
           Q  HP+  Q HHQ       G+QG
Sbjct: 172 QEQHPQHHQPHHQQQHMMYGGQQG 195


>AF228509-1|AAF69136.1|  325|Tribolium castaneum prothoraxless
           protein.
          Length = 325

 Score = 24.6 bits (51), Expect = 0.87
 Identities = 10/24 (41%), Positives = 12/24 (50%)
 Frame = +3

Query: 408 QADHPRQVQRHHQVAGFQPAGRQG 479
           Q  HP+  Q HHQ       G+QG
Sbjct: 174 QEQHPQHHQPHHQQQHMMYGGQQG 197


>DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome
            adhesion molecule splicevariant 3.12.3.1 protein.
          Length = 1639

 Score = 23.8 bits (49), Expect = 1.5
 Identities = 12/59 (20%), Positives = 30/59 (50%)
 Frame = +2

Query: 113  PRGVPQIEVTFDIDANGILNVSAIEKSTNKENKITITNDKGRLSKEETSVWLMRQRSTE 289
            P+G  +  +  +I ANG+L+  +I+++   ++ +           ++TS+ ++ Q   E
Sbjct: 839  PKGDNRYTIREEILANGVLSGLSIKRTERSDSALFTCVATNAFGSDDTSINMIVQEVPE 897


>AY675073-1|AAV74190.1|  533|Tribolium castaneum chitinase 5
           protein.
          Length = 533

 Score = 23.4 bits (48), Expect = 2.0
 Identities = 11/39 (28%), Positives = 19/39 (48%)
 Frame = +2

Query: 86  FELTGIPPAPRGVPQIEVTFDIDANGILNVSAIEKSTNK 202
           +   G+  A   V  I+   D+D NG  N + ++K+  K
Sbjct: 56  YSFIGVNDADWSVLVIDPELDVDQNGFRNFTNLKKTHPK 94


>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
           candidate 46 protein.
          Length = 1451

 Score = 21.4 bits (43), Expect = 8.1
 Identities = 11/28 (39%), Positives = 15/28 (53%)
 Frame = -1

Query: 94  QLEFTEQVVIFGHSTLTLKYLDEYSGLV 11
           Q    +QV  F HS  ++ +L E  GLV
Sbjct: 362 QYVMQQQVKNFRHSVRSVFFLSEIFGLV 389


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 156,239
Number of Sequences: 336
Number of extensions: 3140
Number of successful extensions: 11
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 20442493
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)