Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fner10a11r
         (726 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X72339-1|CAA51066.1|  133|Tribolium castaneum abdominal protein.       30   0.022
AF017415-2|AAB70263.1|  284|Tribolium castaneum abdominal-A prot...    30   0.022
AF017415-1|AAB70262.1|  343|Tribolium castaneum abdominal-AII pr...    30   0.022
AF321227-1|AAK16421.1|  290|Tribolium castaneum Ftz protein.           27   0.15 
U14732-1|AAC46491.1|  322|Tribolium castaneum fushi-tarazu protein.    24   1.1  
AY043292-2|AAK96032.1|  290|Tribolium castaneum homeodomain tran...    24   1.1  
AM292362-1|CAL23174.2|  398|Tribolium castaneum gustatory recept...    23   2.5  
AM292330-1|CAL23142.2|  408|Tribolium castaneum gustatory recept...    23   3.3  
AM292323-1|CAL23135.2|  587|Tribolium castaneum gustatory recept...    23   3.3  
AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory recept...    22   4.4  
AF452568-1|AAL57830.1|  243|Tribolium castaneum homeodomain tran...    22   4.4  
AF321227-5|AAK16425.1|  292|Tribolium castaneum Zen2 protein.          22   4.4  
AF225975-1|AAF74117.1|  256|Tribolium castaneum unknown protein.       22   4.4  
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    22   5.8  
AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr...    22   5.8  
AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ...    21   7.7  
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ...    21   7.7  
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ...    21   7.7  
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ...    21   7.7  
AM292363-1|CAL23175.2|  347|Tribolium castaneum gustatory recept...    21   7.7  

>X72339-1|CAA51066.1|  133|Tribolium castaneum abdominal protein.
          Length = 133

 Score = 29.9 bits (64), Expect = 0.022
 Identities = 16/65 (24%), Positives = 29/65 (44%)
 Frame = -1

Query: 546 SNYKTSRRESATKHKLECSKKETSKKFQSKRTKLNTETEEWNDSSHLLWQNRNSNKRHAN 367
           ++Y T RR     H L  ++++    FQ++R KL  E     + +    + R   +RH  
Sbjct: 28  NHYLTRRRRIEIAHALCLTERQIKIWFQNRRMKLKKELRAVKEINEQARREREEQERHKQ 87

Query: 366 LMPEE 352
              E+
Sbjct: 88  QQQEK 92


>AF017415-2|AAB70263.1|  284|Tribolium castaneum abdominal-A
           protein.
          Length = 284

 Score = 29.9 bits (64), Expect = 0.022
 Identities = 16/65 (24%), Positives = 29/65 (44%)
 Frame = -1

Query: 546 SNYKTSRRESATKHKLECSKKETSKKFQSKRTKLNTETEEWNDSSHLLWQNRNSNKRHAN 367
           ++Y T RR     H L  ++++    FQ++R KL  E     + +    + R   +RH  
Sbjct: 179 NHYLTRRRRIEIAHALCLTERQIKIWFQNRRMKLKKELRAVKEINEQARREREEQERHKQ 238

Query: 366 LMPEE 352
              E+
Sbjct: 239 QQQEK 243


>AF017415-1|AAB70262.1|  343|Tribolium castaneum abdominal-AII
           protein.
          Length = 343

 Score = 29.9 bits (64), Expect = 0.022
 Identities = 16/65 (24%), Positives = 29/65 (44%)
 Frame = -1

Query: 546 SNYKTSRRESATKHKLECSKKETSKKFQSKRTKLNTETEEWNDSSHLLWQNRNSNKRHAN 367
           ++Y T RR     H L  ++++    FQ++R KL  E     + +    + R   +RH  
Sbjct: 238 NHYLTRRRRIEIAHALCLTERQIKIWFQNRRMKLKKELRAVKEINEQARREREEQERHKQ 297

Query: 366 LMPEE 352
              E+
Sbjct: 298 QQQEK 302


>AF321227-1|AAK16421.1|  290|Tribolium castaneum Ftz protein.
          Length = 290

 Score = 27.1 bits (57), Expect = 0.15
 Identities = 13/24 (54%), Positives = 14/24 (58%)
 Frame = -1

Query: 681 NYASGPFPGDFIDYNQPTECHNYT 610
           NY + PF     D NQ TE HNYT
Sbjct: 18  NYKTNPFLASDCDKNQNTE-HNYT 40


>U14732-1|AAC46491.1|  322|Tribolium castaneum fushi-tarazu protein.
          Length = 322

 Score = 24.2 bits (50), Expect = 1.1
 Identities = 14/47 (29%), Positives = 21/47 (44%)
 Frame = -1

Query: 681 NYASGPFPGDFIDYNQPTECHNYTSHKYEDLKMRNSSNYQQEKLPSN 541
           NY + PF     D NQ TE  NYT +     +++    Y+  +   N
Sbjct: 18  NYKTNPFLASDCDKNQNTE-QNYTHNNEMYHRVKEEPIYESCRFSIN 63


>AY043292-2|AAK96032.1|  290|Tribolium castaneum homeodomain
           transcription factor Fushitarazu protein.
          Length = 290

 Score = 24.2 bits (50), Expect = 1.1
 Identities = 14/47 (29%), Positives = 21/47 (44%)
 Frame = -1

Query: 681 NYASGPFPGDFIDYNQPTECHNYTSHKYEDLKMRNSSNYQQEKLPSN 541
           NY + PF     D NQ TE  NYT +     +++    Y+  +   N
Sbjct: 18  NYKTNPFLASDCDKNQNTE-QNYTHNNEMYHRVKEEPIYESCRFSIN 63


>AM292362-1|CAL23174.2|  398|Tribolium castaneum gustatory receptor
           candidate 41 protein.
          Length = 398

 Score = 23.0 bits (47), Expect = 2.5
 Identities = 12/31 (38%), Positives = 19/31 (61%), Gaps = 3/31 (9%)
 Frame = +1

Query: 571 RTVSHFQIFVFMTCVIVTLCR---LVVVNKI 654
           R+ S+F +F+F    IVTL     L++VN +
Sbjct: 68  RSYSNFSVFLFDIITIVTLTSTSILLIVNAV 98


>AM292330-1|CAL23142.2|  408|Tribolium castaneum gustatory receptor
           candidate 9 protein.
          Length = 408

 Score = 22.6 bits (46), Expect = 3.3
 Identities = 9/26 (34%), Positives = 16/26 (61%)
 Frame = +1

Query: 253 PHGLNVRSNKMTI*EL*LILGSHLIT 330
           P GLN + N +T+  + + LG H ++
Sbjct: 129 PKGLNKKLNTLTVVFMLIALGEHWLS 154


>AM292323-1|CAL23135.2|  587|Tribolium castaneum gustatory receptor
           candidate 2 protein.
          Length = 587

 Score = 22.6 bits (46), Expect = 3.3
 Identities = 9/26 (34%), Positives = 16/26 (61%)
 Frame = +1

Query: 253 PHGLNVRSNKMTI*EL*LILGSHLIT 330
           P GLN + N +T+  + + LG H ++
Sbjct: 129 PKGLNKKLNTLTVVFMLIALGEHWLS 154


>AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory receptor
           candidate 61 protein.
          Length = 670

 Score = 22.2 bits (45), Expect = 4.4
 Identities = 11/34 (32%), Positives = 18/34 (52%), Gaps = 2/34 (5%)
 Frame = +2

Query: 134 LSFLVYHDWTFMVISGNIVL--RLKLARDVPEKL 229
           LSFL+ H      ++ N++L  R K   ++ E L
Sbjct: 178 LSFLMVHQGETQFVAANVILKTRFKTINNILENL 211


>AF452568-1|AAL57830.1|  243|Tribolium castaneum homeodomain
           transcription factor Zen2 protein.
          Length = 243

 Score = 22.2 bits (45), Expect = 4.4
 Identities = 15/61 (24%), Positives = 22/61 (36%)
 Frame = -1

Query: 720 SNFMQNSGNLMTGNYASGPFPGDFIDYNQPTECHNYTSHKYEDLKMRNSSNYQQEKLPSN 541
           S    NS +     +    FPG      +   C   T   Y+    + + NYQ  +  SN
Sbjct: 164 STSSNNSASPKACQFLYNQFPGSSQVVVKDETCQYDTESSYQFNDPQFNFNYQYNQAYSN 223

Query: 540 Y 538
           Y
Sbjct: 224 Y 224


>AF321227-5|AAK16425.1|  292|Tribolium castaneum Zen2 protein.
          Length = 292

 Score = 22.2 bits (45), Expect = 4.4
 Identities = 15/61 (24%), Positives = 22/61 (36%)
 Frame = -1

Query: 720 SNFMQNSGNLMTGNYASGPFPGDFIDYNQPTECHNYTSHKYEDLKMRNSSNYQQEKLPSN 541
           S    NS +     +    FPG      +   C   T   Y+    + + NYQ  +  SN
Sbjct: 184 STSSNNSASPKACQFLYNQFPGSSQVVVKDETCQYDTESSYQFNDPQFNFNYQYNQAYSN 243

Query: 540 Y 538
           Y
Sbjct: 244 Y 244


>AF225975-1|AAF74117.1|  256|Tribolium castaneum unknown protein.
          Length = 256

 Score = 22.2 bits (45), Expect = 4.4
 Identities = 17/73 (23%), Positives = 26/73 (35%)
 Frame = -1

Query: 672 SGPFPGDFIDYNQPTECHNYTSHKYEDLKMRNSSNYQQEKLPSNYKTSRRESATKHKLEC 493
           SG  PG   + N       YT  +   +  +   NY+ ++  S     R           
Sbjct: 119 SGESPGFTTERNWEIREKPYTPPRLPTVYGKPEQNYEVDESASVMTNGRIHGIQPSPTLP 178

Query: 492 SKKETSKKFQSKR 454
           SK+E SKK    +
Sbjct: 179 SKEEVSKKIDDNQ 191


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 21.8 bits (44), Expect = 5.8
 Identities = 4/12 (33%), Positives = 11/12 (91%)
 Frame = -1

Query: 45  YYYIMEMYFIIC 10
           YY+++ ++F++C
Sbjct: 134 YYFVVPLFFLLC 145


>AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like
           protein protein.
          Length = 1156

 Score = 21.8 bits (44), Expect = 5.8
 Identities = 9/21 (42%), Positives = 11/21 (52%)
 Frame = -3

Query: 247 CGQNFSQFFGNISGQFQSQHY 185
           CGQ+F       S   Q+QHY
Sbjct: 484 CGQSFRSLAEMTSHMQQTQHY 504


>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
           variant 2 protein.
          Length = 1558

 Score = 21.4 bits (43), Expect = 7.7
 Identities = 6/11 (54%), Positives = 9/11 (81%)
 Frame = -2

Query: 41  IILWKCILLFV 9
           + +WKC+L FV
Sbjct: 302 VSVWKCLLFFV 312


>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
           variant 1 protein.
          Length = 1558

 Score = 21.4 bits (43), Expect = 7.7
 Identities = 6/11 (54%), Positives = 9/11 (81%)
 Frame = -2

Query: 41  IILWKCILLFV 9
           + +WKC+L FV
Sbjct: 302 VSVWKCLLFFV 312


>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase
           CHS1B protein.
          Length = 1558

 Score = 21.4 bits (43), Expect = 7.7
 Identities = 6/11 (54%), Positives = 9/11 (81%)
 Frame = -2

Query: 41  IILWKCILLFV 9
           + +WKC+L FV
Sbjct: 302 VSVWKCLLFFV 312


>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase
           CHS1A protein.
          Length = 1558

 Score = 21.4 bits (43), Expect = 7.7
 Identities = 6/11 (54%), Positives = 9/11 (81%)
 Frame = -2

Query: 41  IILWKCILLFV 9
           + +WKC+L FV
Sbjct: 302 VSVWKCLLFFV 312


>AM292363-1|CAL23175.2|  347|Tribolium castaneum gustatory receptor
           candidate 42 protein.
          Length = 347

 Score = 21.4 bits (43), Expect = 7.7
 Identities = 8/9 (88%), Positives = 8/9 (88%)
 Frame = +1

Query: 169 GYFREYSAE 195
           GYFREY AE
Sbjct: 140 GYFREYLAE 148


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 172,939
Number of Sequences: 336
Number of extensions: 3834
Number of successful extensions: 23
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 23
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 23
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 19363530
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)