Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fner10a05r
         (803 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.          27   0.23 
AF219117-1|AAF71999.1|  406|Tribolium castaneum tailless ortholo...    25   0.71 
AY769608-1|AAV40984.1|  195|Tribolium castaneum heat shock prote...    23   2.2  
AM295014-1|CAL25729.1|  407|Tribolium castaneum ultraspiracle nu...    23   2.2  
EU019709-1|ABU25221.1|  540|Tribolium castaneum aspartate 1-deca...    23   3.8  
AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr...    22   5.0  
AM292326-1|CAL23138.2|  522|Tribolium castaneum gustatory recept...    21   8.7  

>DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.
          Length = 822

 Score = 26.6 bits (56), Expect = 0.23
 Identities = 16/48 (33%), Positives = 24/48 (50%), Gaps = 2/48 (4%)
 Frame = -3

Query: 402 STPYGSVDRSSPPSLPSNKCGSRNKS--TTSLAPPLYTGSASKRTARR 265
           S  Y S++ ++PP  P  +  S  ++  T S  PPLY    +KR   R
Sbjct: 720 SISYLSMENNAPPPPPPPRVESFAETVRTVSKIPPLYKDLVAKRCEER 767


>AF219117-1|AAF71999.1|  406|Tribolium castaneum tailless ortholog
           protein.
          Length = 406

 Score = 25.0 bits (52), Expect = 0.71
 Identities = 16/49 (32%), Positives = 22/49 (44%)
 Frame = -3

Query: 729 WPPLHPAAPSRSLTNFPTVRSSPSETKDSVAQRLSSNPRSWVWKLAAST 583
           +PPL    P      FP    +PS   +S AQ +  N + WV  + A T
Sbjct: 174 YPPLPQVPPLPLPPIFPPTMINPSAICESAAQLIFMNVQ-WVRSIPAFT 221


>AY769608-1|AAV40984.1|  195|Tribolium castaneum heat shock protein
           70 protein.
          Length = 195

 Score = 23.4 bits (48), Expect = 2.2
 Identities = 11/24 (45%), Positives = 13/24 (54%)
 Frame = -2

Query: 553 DVDIRKDLYANTVLSGGTTMYPGI 482
           D D+ KD     VL GG+T  P I
Sbjct: 150 DADMTKDQIDEIVLVGGSTRIPKI 173


>AM295014-1|CAL25729.1|  407|Tribolium castaneum ultraspiracle
           nuclear receptor protein.
          Length = 407

 Score = 23.4 bits (48), Expect = 2.2
 Identities = 14/34 (41%), Positives = 17/34 (50%)
 Frame = -3

Query: 363 SLPSNKCGSRNKSTTSLAPPLYTGSASKRTARRC 262
           SL S    + NKS+TS  PP +  S SK     C
Sbjct: 56  SLLSPSGNTPNKSSTSPYPPNHPLSGSKHLCSIC 89


>EU019709-1|ABU25221.1|  540|Tribolium castaneum aspartate
           1-decarboxylase protein.
          Length = 540

 Score = 22.6 bits (46), Expect = 3.8
 Identities = 7/17 (41%), Positives = 12/17 (70%)
 Frame = +2

Query: 380 STDPYGVLPLWRSNDLN 430
           + DPYG++  W ++ LN
Sbjct: 141 AVDPYGLVAQWATDALN 157


>AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like
           protein protein.
          Length = 1156

 Score = 22.2 bits (45), Expect = 5.0
 Identities = 11/32 (34%), Positives = 19/32 (59%), Gaps = 2/32 (6%)
 Frame = -3

Query: 360 LPSNKCGSRNKSTTSLAPPLYTGSA--SKRTA 271
           LP+++C SR  S + + P   +G +  S+R A
Sbjct: 79  LPNSRCNSRESSDSLVQPRCPSGESMLSERAA 110



 Score = 22.2 bits (45), Expect = 5.0
 Identities = 8/34 (23%), Positives = 14/34 (41%)
 Frame = +1

Query: 694 TSRGSCWMQRWPSPARSQERRSTASP*CHERFPA 795
           ++R S W   W +    Q +       C + FP+
Sbjct: 356 SNRHSAWQSHWLNKGAEQAKNVLKCVWCKQSFPS 389


>AM292326-1|CAL23138.2|  522|Tribolium castaneum gustatory receptor
           candidate 5 protein.
          Length = 522

 Score = 21.4 bits (43), Expect = 8.7
 Identities = 8/21 (38%), Positives = 15/21 (71%)
 Frame = +2

Query: 731 LLLEVKSDVAQLLLDVTNDFP 793
           L+ + +++  ++LLDV N FP
Sbjct: 465 LVYQNEAEEVKILLDVINHFP 485


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 187,460
Number of Sequences: 336
Number of extensions: 4404
Number of successful extensions: 10
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 21895259
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)