Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbS20025
(670 letters)
Database: tribolium
336 sequences; 122,585 total letters
Searching.......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AJ005421-1|CAA06527.1| 249|Tribolium castaneum caudal protein p... 27 0.18
AM712904-1|CAN84643.1| 86|Tribolium castaneum hypothetical pro... 22 4.0
AJ005083-1|CAB65469.1| 585|Tribolium castaneum signal receptor ... 22 4.0
AY043293-2|AAK96034.1| 353|Tribolium castaneum homeodomain tran... 22 5.2
AF231104-1|AAF64149.1| 142|Tribolium castaneum labial protein p... 22 5.2
AF231103-1|AAF64148.1| 142|Tribolium castaneum labial protein p... 22 5.2
AM292383-1|CAL23195.2| 320|Tribolium castaneum gustatory recept... 21 6.9
AM292358-1|CAL23170.2| 331|Tribolium castaneum gustatory recept... 21 6.9
AM292353-1|CAL23165.2| 651|Tribolium castaneum gustatory recept... 21 6.9
U81040-1|AAB39356.1| 283|Tribolium castaneum TC Deformed protein. 21 9.1
U81038-1|AAB39355.1| 412|Tribolium castaneum transcription fact... 21 9.1
AF321227-3|AAK16423.1| 412|Tribolium castaneum Dfd protein. 21 9.1
>AJ005421-1|CAA06527.1| 249|Tribolium castaneum caudal protein
protein.
Length = 249
Score = 26.6 bits (56), Expect = 0.18
Identities = 14/48 (29%), Positives = 23/48 (47%)
Frame = -3
Query: 146 ANYQDDQSRNGKQKIEAKHEVLYTGHSTFESHCYSIKYYRQIVLLRNK 3
A++ D GK + + K+ V+YT H E YY + + +R K
Sbjct: 141 ADFADAPDAIGKTRTKDKYRVVYTDHQRVELE--KEFYYSRYITIRRK 186
>AM712904-1|CAN84643.1| 86|Tribolium castaneum hypothetical
protein protein.
Length = 86
Score = 22.2 bits (45), Expect = 4.0
Identities = 10/18 (55%), Positives = 12/18 (66%)
Frame = -2
Query: 549 AARARYGQTVIGPVAGLF 496
A AR+G VIG +AG F
Sbjct: 69 ATYARFGPYVIGMLAGYF 86
>AJ005083-1|CAB65469.1| 585|Tribolium castaneum signal receptor
protein protein.
Length = 585
Score = 22.2 bits (45), Expect = 4.0
Identities = 6/11 (54%), Positives = 7/11 (63%)
Frame = +2
Query: 227 HCRHYCFHCPF 259
H HY HCP+
Sbjct: 79 HTTHYTCHCPY 89
>AY043293-2|AAK96034.1| 353|Tribolium castaneum homeodomain
transcription factor Labialprotein.
Length = 353
Score = 21.8 bits (44), Expect = 5.2
Identities = 13/35 (37%), Positives = 15/35 (42%)
Frame = -1
Query: 166 EFISALMPTIRMINPVMANRRLKQNMRYFTQDIPP 62
E SAL + NRR+KQ R IPP
Sbjct: 285 EIASALQLNETQVKIWFQNRRMKQKKRMKEGLIPP 319
>AF231104-1|AAF64149.1| 142|Tribolium castaneum labial protein
protein.
Length = 142
Score = 21.8 bits (44), Expect = 5.2
Identities = 13/35 (37%), Positives = 15/35 (42%)
Frame = -1
Query: 166 EFISALMPTIRMINPVMANRRLKQNMRYFTQDIPP 62
E SAL + NRR+KQ R IPP
Sbjct: 74 EIASALQLNETQVKIWFQNRRMKQKKRMKEGLIPP 108
>AF231103-1|AAF64148.1| 142|Tribolium castaneum labial protein
protein.
Length = 142
Score = 21.8 bits (44), Expect = 5.2
Identities = 13/35 (37%), Positives = 15/35 (42%)
Frame = -1
Query: 166 EFISALMPTIRMINPVMANRRLKQNMRYFTQDIPP 62
E SAL + NRR+KQ R IPP
Sbjct: 74 EIASALQLNETQVKIWFQNRRMKQKKRMKEGLIPP 108
>AM292383-1|CAL23195.2| 320|Tribolium castaneum gustatory receptor
candidate 62 protein.
Length = 320
Score = 21.4 bits (43), Expect = 6.9
Identities = 14/42 (33%), Positives = 19/42 (45%)
Frame = +2
Query: 299 IITFSVFLLIIFVAELAVGIAGYMKHTDLEDSVMRNLNASIT 424
+ TF LL VA A + G + DLE + N N +T
Sbjct: 244 VCTFYNILLCDSVAHTAGELLGAVYSLDLELKHIENFNDFVT 285
>AM292358-1|CAL23170.2| 331|Tribolium castaneum gustatory receptor
candidate 37 protein.
Length = 331
Score = 21.4 bits (43), Expect = 6.9
Identities = 14/42 (33%), Positives = 19/42 (45%)
Frame = +2
Query: 299 IITFSVFLLIIFVAELAVGIAGYMKHTDLEDSVMRNLNASIT 424
+ TF LL VA A + G + DLE + N N +T
Sbjct: 244 VCTFYNILLCDSVAHTAGELLGAVYSLDLELKHIENFNDFVT 285
>AM292353-1|CAL23165.2| 651|Tribolium castaneum gustatory receptor
candidate 32 protein.
Length = 651
Score = 21.4 bits (43), Expect = 6.9
Identities = 14/42 (33%), Positives = 19/42 (45%)
Frame = +2
Query: 299 IITFSVFLLIIFVAELAVGIAGYMKHTDLEDSVMRNLNASIT 424
+ TF LL VA A + G + DLE + N N +T
Sbjct: 564 VCTFYNILLCDSVAHTAGELLGAVYSLDLELKHIENFNDFVT 605
>U81040-1|AAB39356.1| 283|Tribolium castaneum TC Deformed protein.
Length = 283
Score = 21.0 bits (42), Expect = 9.1
Identities = 9/19 (47%), Positives = 12/19 (63%)
Frame = +2
Query: 86 PHVLLQSSVCHYGIDHPDS 142
P+ ++SSVC G H DS
Sbjct: 141 PNCDVKSSVCSPGSGHQDS 159
>U81038-1|AAB39355.1| 412|Tribolium castaneum transcription factor
Deformed protein.
Length = 412
Score = 21.0 bits (42), Expect = 9.1
Identities = 9/19 (47%), Positives = 12/19 (63%)
Frame = +2
Query: 86 PHVLLQSSVCHYGIDHPDS 142
P+ ++SSVC G H DS
Sbjct: 141 PNCDVKSSVCSPGSGHQDS 159
>AF321227-3|AAK16423.1| 412|Tribolium castaneum Dfd protein.
Length = 412
Score = 21.0 bits (42), Expect = 9.1
Identities = 9/19 (47%), Positives = 12/19 (63%)
Frame = +2
Query: 86 PHVLLQSSVCHYGIDHPDS 142
P+ ++SSVC G H DS
Sbjct: 141 PNCDVKSSVCSPGSGHQDS 159
Database: tribolium
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 122,585
Number of sequences in database: 336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 156,081
Number of Sequences: 336
Number of extensions: 3221
Number of successful extensions: 12
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 17385535
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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