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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbS20012
         (652 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome ad...    23   1.6  
AF442747-1|AAL40947.1|  669|Tribolium castaneum ABC transmembran...    22   3.8  
AF422804-1|AAL56571.1|  669|Tribolium castaneum ABC transmembran...    22   3.8  
AY043293-2|AAK96034.1|  353|Tribolium castaneum homeodomain tran...    22   5.0  
AF230313-1|AAF64147.1|  210|Tribolium castaneum labial protein p...    22   5.0  
AF230312-1|AAF64146.1|  253|Tribolium castaneum labial protein p...    22   5.0  
AY490815-1|AAR82970.1|  136|Tribolium castaneum glass protein pr...    21   6.7  
AY362544-1|AAQ63456.1|  268|Tribolium castaneum chitin synthase ...    21   6.7  
AY362543-1|AAQ63455.1|  677|Tribolium castaneum chitin synthase ...    21   6.7  
AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ...    21   6.7  
AY293621-1|AAP46162.1|  392|Tribolium castaneum glass protein pr...    21   6.7  
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ...    21   6.7  

>DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome
           adhesion molecule splicevariant 3.12.3.1 protein.
          Length = 1639

 Score = 23.4 bits (48), Expect = 1.6
 Identities = 10/23 (43%), Positives = 13/23 (56%)
 Frame = -2

Query: 249 NDARTISWLHQT*SCSHSEKLLR 181
           N  +TISWL       H+E +LR
Sbjct: 354 NPIKTISWLKDGHPIDHNEAVLR 376


>AF442747-1|AAL40947.1|  669|Tribolium castaneum ABC transmembrane
           transporter protein.
          Length = 669

 Score = 22.2 bits (45), Expect = 3.8
 Identities = 10/31 (32%), Positives = 17/31 (54%)
 Frame = +2

Query: 71  VLCPFQFSGSFTEKMASIPVYEEYHFETLRW 163
           ++ PF   G F   ++SIP+Y ++    L W
Sbjct: 564 LVIPFLLFGGFFLNVSSIPIYFKW-LSFLSW 593


>AF422804-1|AAL56571.1|  669|Tribolium castaneum ABC transmembrane
           transporter white protein.
          Length = 669

 Score = 22.2 bits (45), Expect = 3.8
 Identities = 10/31 (32%), Positives = 17/31 (54%)
 Frame = +2

Query: 71  VLCPFQFSGSFTEKMASIPVYEEYHFETLRW 163
           ++ PF   G F   ++SIP+Y ++    L W
Sbjct: 564 LVIPFLLFGGFFLNVSSIPIYFKW-LSFLSW 593


>AY043293-2|AAK96034.1|  353|Tribolium castaneum homeodomain
           transcription factor Labialprotein.
          Length = 353

 Score = 21.8 bits (44), Expect = 5.0
 Identities = 9/31 (29%), Positives = 11/31 (35%)
 Frame = +2

Query: 440 RHYRMHQQGKPTSTNPVASIYAWQEVLHTGP 532
           R + MH         PV   Y W +V    P
Sbjct: 177 RQHVMHNLSSVPQPQPVLPTYKWMQVKRNVP 207


>AF230313-1|AAF64147.1|  210|Tribolium castaneum labial protein
           protein.
          Length = 210

 Score = 21.8 bits (44), Expect = 5.0
 Identities = 9/31 (29%), Positives = 11/31 (35%)
 Frame = +2

Query: 440 RHYRMHQQGKPTSTNPVASIYAWQEVLHTGP 532
           R + MH         PV   Y W +V    P
Sbjct: 177 RQHVMHNLSSVPQPQPVLPTYKWMQVKRNVP 207


>AF230312-1|AAF64146.1|  253|Tribolium castaneum labial protein
           protein.
          Length = 253

 Score = 21.8 bits (44), Expect = 5.0
 Identities = 9/31 (29%), Positives = 11/31 (35%)
 Frame = +2

Query: 440 RHYRMHQQGKPTSTNPVASIYAWQEVLHTGP 532
           R + MH         PV   Y W +V    P
Sbjct: 177 RQHVMHNLSSVPQPQPVLPTYKWMQVKRNVP 207


>AY490815-1|AAR82970.1|  136|Tribolium castaneum glass protein
           protein.
          Length = 136

 Score = 21.4 bits (43), Expect = 6.7
 Identities = 8/18 (44%), Positives = 11/18 (61%)
 Frame = +2

Query: 419 SAHGTVTRHYRMHQQGKP 472
           S   T+T+H R+H   KP
Sbjct: 88  SDSSTLTKHLRIHSGEKP 105


>AY362544-1|AAQ63456.1|  268|Tribolium castaneum chitin synthase
           protein.
          Length = 268

 Score = 21.4 bits (43), Expect = 6.7
 Identities = 12/39 (30%), Positives = 16/39 (41%)
 Frame = +1

Query: 322 RCAVRYCCSGLRVIGNDDISIDVSRWPYRGIRIGARDGD 438
           +C   Y   G R + ND++S            I A DGD
Sbjct: 125 QCMYMYFLLGFRYLVNDELSAHSKEIRGENTYILALDGD 163


>AY362543-1|AAQ63455.1|  677|Tribolium castaneum chitin synthase
           protein.
          Length = 677

 Score = 21.4 bits (43), Expect = 6.7
 Identities = 12/39 (30%), Positives = 16/39 (41%)
 Frame = +1

Query: 322 RCAVRYCCSGLRVIGNDDISIDVSRWPYRGIRIGARDGD 438
           +C   Y   G R + ND++S            I A DGD
Sbjct: 439 QCMYMYFLLGFRYLVNDELSAHSKEIRGENTYILALDGD 477


>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
           protein.
          Length = 1464

 Score = 21.4 bits (43), Expect = 6.7
 Identities = 12/39 (30%), Positives = 16/39 (41%)
 Frame = +1

Query: 322 RCAVRYCCSGLRVIGNDDISIDVSRWPYRGIRIGARDGD 438
           +C   Y   G R+  ND++S            I A DGD
Sbjct: 672 QCMYMYFLLGFRLQANDELSAHSKEIRGENTYILALDGD 710


>AY293621-1|AAP46162.1|  392|Tribolium castaneum glass protein
           protein.
          Length = 392

 Score = 21.4 bits (43), Expect = 6.7
 Identities = 8/18 (44%), Positives = 11/18 (61%)
 Frame = +2

Query: 419 SAHGTVTRHYRMHQQGKP 472
           S   T+T+H R+H   KP
Sbjct: 344 SDSSTLTKHLRIHSGEKP 361


>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase
           CHS2 protein.
          Length = 1464

 Score = 21.4 bits (43), Expect = 6.7
 Identities = 12/39 (30%), Positives = 16/39 (41%)
 Frame = +1

Query: 322 RCAVRYCCSGLRVIGNDDISIDVSRWPYRGIRIGARDGD 438
           +C   Y   G R+  ND++S            I A DGD
Sbjct: 672 QCMYMYFLLGFRLQANDELSAHSKEIRGENTYILALDGD 710


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 167,045
Number of Sequences: 336
Number of extensions: 3916
Number of successful extensions: 14
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 16760905
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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