Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV30028
         (929 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ211693-1|ABB16909.1|  314|Tribolium castaneum dorsocross protein.    25   0.64 
AM292366-1|CAL23178.2|  379|Tribolium castaneum gustatory recept...    24   1.9  
AM292329-1|CAL23141.2|  379|Tribolium castaneum gustatory recept...    24   1.9  
AY920544-1|AAX62142.1|  463|Tribolium castaneum cytochrome P450 ...    23   4.5  
AM292359-1|CAL23171.2|  436|Tribolium castaneum gustatory recept...    22   5.9  

>DQ211693-1|ABB16909.1|  314|Tribolium castaneum dorsocross protein.
          Length = 314

 Score = 25.4 bits (53), Expect = 0.64
 Identities = 10/20 (50%), Positives = 12/20 (60%)
 Frame = -1

Query: 902 WLKNCCSFSLVKLMQSCSKP 843
           W+    SFS VKL  +CS P
Sbjct: 114 WMNQDISFSRVKLTNTCSPP 133


>AM292366-1|CAL23178.2|  379|Tribolium castaneum gustatory receptor
           candidate 45 protein.
          Length = 379

 Score = 23.8 bits (49), Expect = 1.9
 Identities = 11/23 (47%), Positives = 15/23 (65%)
 Frame = -1

Query: 788 LFCLVSRVSLHFLTSHLKRRSKI 720
           LFC++  V LHFLT +L    K+
Sbjct: 173 LFCVLYVVLLHFLTYNLSLGIKL 195


>AM292329-1|CAL23141.2|  379|Tribolium castaneum gustatory receptor
           candidate 8 protein.
          Length = 379

 Score = 23.8 bits (49), Expect = 1.9
 Identities = 11/23 (47%), Positives = 15/23 (65%)
 Frame = -1

Query: 788 LFCLVSRVSLHFLTSHLKRRSKI 720
           LFC++  V LHFLT +L    K+
Sbjct: 173 LFCVLYVVLLHFLTYNLSLGIKL 195


>AY920544-1|AAX62142.1|  463|Tribolium castaneum cytochrome P450
           monooxygenase protein.
          Length = 463

 Score = 22.6 bits (46), Expect = 4.5
 Identities = 9/17 (52%), Positives = 12/17 (70%)
 Frame = +1

Query: 343 NDVMDYNIVSQGKTVIP 393
           N +  ++IV  GKTVIP
Sbjct: 423 NCIAKFDIVPNGKTVIP 439


>AM292359-1|CAL23171.2|  436|Tribolium castaneum gustatory receptor
           candidate 38 protein.
          Length = 436

 Score = 22.2 bits (45), Expect = 5.9
 Identities = 9/30 (30%), Positives = 16/30 (53%)
 Frame = +1

Query: 829 IFDFNGFEQLCINFTNEKLQQFFNHHMFVL 918
           + D+  FE++    T +KL  FF +   +L
Sbjct: 159 VTDWVNFERIYYKLTKKKLSVFFGNKPVIL 188


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 198,626
Number of Sequences: 336
Number of extensions: 4070
Number of successful extensions: 16
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16
length of database: 122,585
effective HSP length: 57
effective length of database: 103,433
effective search space used: 26065116
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)