Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV30017
         (681 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY920544-1|AAX62142.1|  463|Tribolium castaneum cytochrome P450 ...    23   1.8  
EU008544-1|ABS31131.1|  493|Tribolium castaneum cytochrome P450 ...    23   2.3  
AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.    23   3.1  
AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.    23   3.1  
AJ876407-1|CAI45288.1|  590|Tribolium castaneum phosphatase prot...    22   5.3  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    21   9.3  

>AY920544-1|AAX62142.1|  463|Tribolium castaneum cytochrome P450
           monooxygenase protein.
          Length = 463

 Score = 23.4 bits (48), Expect = 1.8
 Identities = 8/29 (27%), Positives = 17/29 (58%), Gaps = 3/29 (10%)
 Frame = +1

Query: 115 VYKPGRYVADPGRYDPSR---DNSGRYIP 192
           +++  +Y  DP ++DP R   +N  + +P
Sbjct: 383 IHRDPQYFPDPEKFDPERFSDENKAKIVP 411


>EU008544-1|ABS31131.1|  493|Tribolium castaneum cytochrome P450
           protein.
          Length = 493

 Score = 23.0 bits (47), Expect = 2.3
 Identities = 10/22 (45%), Positives = 12/22 (54%)
 Frame = +1

Query: 103 VSPFVYKPGRYVADPGRYDPSR 168
           +S   Y P  Y  DP +YDP R
Sbjct: 393 ISGLHYDP-EYYPDPEKYDPER 413



 Score = 21.0 bits (42), Expect = 9.3
 Identities = 9/22 (40%), Positives = 11/22 (50%)
 Frame = +1

Query: 97  STVSPFVYKPGRYVADPGRYDP 162
           S V  FV+ P      P R+DP
Sbjct: 453 SVVKDFVFDPTERTPVPLRFDP 474


>AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.
          Length = 712

 Score = 22.6 bits (46), Expect = 3.1
 Identities = 8/16 (50%), Positives = 10/16 (62%)
 Frame = +3

Query: 18  GNLPVYDSGAGRRNWK 65
           G  P + SG GR+ WK
Sbjct: 69  GGGPRFSSGVGRKAWK 84


>AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.
          Length = 717

 Score = 22.6 bits (46), Expect = 3.1
 Identities = 8/16 (50%), Positives = 10/16 (62%)
 Frame = +3

Query: 18  GNLPVYDSGAGRRNWK 65
           G  P + SG GR+ WK
Sbjct: 69  GGGPRFSSGVGRKAWK 84


>AJ876407-1|CAI45288.1|  590|Tribolium castaneum phosphatase
           protein.
          Length = 590

 Score = 21.8 bits (44), Expect = 5.3
 Identities = 10/27 (37%), Positives = 17/27 (62%)
 Frame = +1

Query: 508 DVVPEGYHYLYETENKILAEEAGKVEN 588
           D+VP   + L +TE ++ A  A KV++
Sbjct: 284 DLVPAFQNLLKDTEAEVRAAAANKVKD 310


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 21.0 bits (42), Expect = 9.3
 Identities = 5/8 (62%), Positives = 6/8 (75%)
 Frame = -3

Query: 430  WVWPPCWQ 407
            W +P CWQ
Sbjct: 1519 WEYPKCWQ 1526



 Score = 21.0 bits (42), Expect = 9.3
 Identities = 5/8 (62%), Positives = 6/8 (75%)
 Frame = -3

Query: 430  WVWPPCWQ 407
            W +P CWQ
Sbjct: 1944 WEYPKCWQ 1951



 Score = 21.0 bits (42), Expect = 9.3
 Identities = 5/8 (62%), Positives = 6/8 (75%)
 Frame = -3

Query: 430  WVWPPCWQ 407
            W +P CWQ
Sbjct: 2442 WEYPKCWQ 2449


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.314    0.136    0.400 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 128,646
Number of Sequences: 336
Number of extensions: 2449
Number of successful extensions: 9
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 17801955
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.9 bits)