Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e96h0030
         (567 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292371-1|CAL23183.2|  350|Tribolium castaneum gustatory recept...    24   1.0  
AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory recept...    21   7.3  
AF322227-1|AAK01654.1|  782|Tribolium castaneum cell surface pro...    21   7.3  

>AM292371-1|CAL23183.2|  350|Tribolium castaneum gustatory receptor
           candidate 50 protein.
          Length = 350

 Score = 23.8 bits (49), Expect = 1.0
 Identities = 11/26 (42%), Positives = 17/26 (65%)
 Frame = -2

Query: 524 HRQLEINLCXLAAPMYGFFRFI*LLN 447
           H +L  NLC +A  +YGF  F+ +L+
Sbjct: 218 HNEL-CNLCQVANSIYGFQNFLFVLS 242


>AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory receptor
           candidate 61 protein.
          Length = 670

 Score = 21.0 bits (42), Expect = 7.3
 Identities = 9/23 (39%), Positives = 12/23 (52%)
 Frame = +1

Query: 286 ETLVSLRQH*QFEVESSTCLLFT 354
           ETL  L Q+  +E +   CL  T
Sbjct: 120 ETLAKLGQYINYETDYYVCLAMT 142


>AF322227-1|AAK01654.1|  782|Tribolium castaneum cell surface
           protein chaoptin protein.
          Length = 782

 Score = 21.0 bits (42), Expect = 7.3
 Identities = 9/21 (42%), Positives = 13/21 (61%)
 Frame = -3

Query: 64  LNLNNVNCEMIYFANTPRLTS 2
           LNL+NV+   +   +TP L S
Sbjct: 450 LNLDNVSLSQVPALSTPNLLS 470


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 113,269
Number of Sequences: 336
Number of extensions: 2097
Number of successful extensions: 3
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 13995094
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)