Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-0004
         (688 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF452568-1|AAL57830.1|  243|Tribolium castaneum homeodomain tran...    21   7.2  
AF321227-5|AAK16425.1|  292|Tribolium castaneum Zen2 protein.          21   7.2  
EF222293-1|ABN79653.1|  434|Tribolium castaneum ecdysis triggeri...    21   9.5  
DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.          21   9.5  
AM292375-1|CAL23187.2|  311|Tribolium castaneum gustatory recept...    21   9.5  
AM292359-1|CAL23171.2|  436|Tribolium castaneum gustatory recept...    21   9.5  
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    21   9.5  

>AF452568-1|AAL57830.1|  243|Tribolium castaneum homeodomain
           transcription factor Zen2 protein.
          Length = 243

 Score = 21.4 bits (43), Expect = 7.2
 Identities = 9/29 (31%), Positives = 14/29 (48%)
 Frame = +3

Query: 363 PRVTPRGEASLKMLCYYLYHQLPISENPV 449
           P+ T    ++    C +LY+Q P S   V
Sbjct: 162 PQSTSSNNSASPKACQFLYNQFPGSSQVV 190


>AF321227-5|AAK16425.1|  292|Tribolium castaneum Zen2 protein.
          Length = 292

 Score = 21.4 bits (43), Expect = 7.2
 Identities = 9/29 (31%), Positives = 14/29 (48%)
 Frame = +3

Query: 363 PRVTPRGEASLKMLCYYLYHQLPISENPV 449
           P+ T    ++    C +LY+Q P S   V
Sbjct: 182 PQSTSSNNSASPKACQFLYNQFPGSSQVV 210


>EF222293-1|ABN79653.1|  434|Tribolium castaneum ecdysis triggering
           hormone receptorisoform A protein.
          Length = 434

 Score = 21.0 bits (42), Expect = 9.5
 Identities = 9/33 (27%), Positives = 17/33 (51%)
 Frame = +2

Query: 131 SSLLRLI*HNYFFYFNRQKIPEVNFLILYYWSS 229
           S +L +  +    YF+  K+P  + L   +WS+
Sbjct: 203 SPMLVIAEYKQLDYFDGSKVPACHTLANTFWSA 235


>DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.
          Length = 822

 Score = 21.0 bits (42), Expect = 9.5
 Identities = 8/24 (33%), Positives = 13/24 (54%)
 Frame = -3

Query: 524 NNIFLQFLSVCLFVPANLWNGCTD 453
           +NI+ Q +   +    N+WN  TD
Sbjct: 514 DNIYDQLIMPRIQAEVNIWNPLTD 537


>AM292375-1|CAL23187.2|  311|Tribolium castaneum gustatory receptor
           candidate 54 protein.
          Length = 311

 Score = 21.0 bits (42), Expect = 9.5
 Identities = 11/35 (31%), Positives = 18/35 (51%)
 Frame = -3

Query: 194 LVFFVY*SKKNNYVKSILTNLKLFVFVFSCFAAII 90
           L F +Y SKK    +     + L VFV++  + I+
Sbjct: 193 LGFLLYASKKQFTFEETFAIIHLSVFVYTLVSVIL 227


>AM292359-1|CAL23171.2|  436|Tribolium castaneum gustatory receptor
           candidate 38 protein.
          Length = 436

 Score = 21.0 bits (42), Expect = 9.5
 Identities = 7/17 (41%), Positives = 12/17 (70%)
 Frame = +2

Query: 602 ILFICIDRFLIITASFF 652
           + F+C+  FLIIT + +
Sbjct: 288 VTFLCLYLFLIITLTIY 304


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 21.0 bits (42), Expect = 9.5
 Identities = 9/28 (32%), Positives = 14/28 (50%)
 Frame = -2

Query: 567 FYYMHMNICTVHTLK*HFFTIFVCLSVC 484
           FYYMH+  C    +    FT+ +   +C
Sbjct: 261 FYYMHLLFCCAFII----FTMHLLFLLC 284


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 142,053
Number of Sequences: 336
Number of extensions: 3037
Number of successful extensions: 7
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18010165
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)