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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brP-0014
         (750 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.      31   0.007
AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.      31   0.007
AY695257-1|AAW21974.1|  224|Tribolium castaneum intermediate neu...    29   0.052
AY321476-2|AAQ23387.1|  257|Tribolium castaneum Ase protein.           25   0.85 
AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory recept...    22   4.6  
AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ...    21   8.0  
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ...    21   8.0  
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ...    21   8.0  
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ...    21   8.0  

>AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.
          Length = 790

 Score = 31.5 bits (68), Expect = 0.007
 Identities = 35/120 (29%), Positives = 47/120 (39%), Gaps = 17/120 (14%)
 Frame = +2

Query: 80  HPGLPKGEPNFAPYNYPPYRAYEKI-------KDPHLPAPP-----PLVSEKNTVIVK-- 217
           H G P  +P  A    PPY+   K        + P  P P      P++S + + +    
Sbjct: 129 HNGDPLSQPPPAHMGIPPYQLDSKTAGSMGLTRPPMYPFPAGQYPYPILSPEMSQVAASW 188

Query: 218 HDAKQIHLEQNHQYPSK-PRNDP-SPHYLPSRTYRTGPSPHAPPHQTLQP-APHTAALPA 388
           H      L     + S  P   P S   LPS  YR  P+   PPH  L P  PH ++ PA
Sbjct: 189 HTPSMYPLSPGAGFRSPYPSALPISTSSLPSDFYRFSPTGLIPPHPGLSPHPPHLSSHPA 248



 Score = 25.4 bits (53), Expect = 0.49
 Identities = 15/56 (26%), Positives = 23/56 (41%)
 Frame = +2

Query: 167 LPAPPPLVSEKNTVIVKHDAKQIHLEQNHQYPSKPRNDPSPHYLPSRTYRTGPSPH 334
           LP+P   V+  +  +      Q  L  +  +  K    P PH+ P R    G +PH
Sbjct: 701 LPSPSTSVASPSVSVASPYMLQSPLTPHEAFDVKLPPPPHPHHQPPRN-PVGTNPH 755


>AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.
          Length = 682

 Score = 31.5 bits (68), Expect = 0.007
 Identities = 35/120 (29%), Positives = 47/120 (39%), Gaps = 17/120 (14%)
 Frame = +2

Query: 80  HPGLPKGEPNFAPYNYPPYRAYEKI-------KDPHLPAPP-----PLVSEKNTVIVK-- 217
           H G P  +P  A    PPY+   K        + P  P P      P++S + + +    
Sbjct: 21  HNGDPLSQPPPAHMGIPPYQLDSKTAGSMGLTRPPMYPFPAGQYPYPILSPEMSQVAASW 80

Query: 218 HDAKQIHLEQNHQYPSK-PRNDP-SPHYLPSRTYRTGPSPHAPPHQTLQP-APHTAALPA 388
           H      L     + S  P   P S   LPS  YR  P+   PPH  L P  PH ++ PA
Sbjct: 81  HTPSMYPLSPGAGFRSPYPSALPISTSSLPSDFYRFSPTGLIPPHPGLSPHPPHLSSHPA 140



 Score = 25.4 bits (53), Expect = 0.49
 Identities = 15/56 (26%), Positives = 23/56 (41%)
 Frame = +2

Query: 167 LPAPPPLVSEKNTVIVKHDAKQIHLEQNHQYPSKPRNDPSPHYLPSRTYRTGPSPH 334
           LP+P   V+  +  +      Q  L  +  +  K    P PH+ P R    G +PH
Sbjct: 593 LPSPSTSVASPSVSVASPYMLQSPLTPHEAFDVKLPPPPHPHHQPPRN-PVGTNPH 647


>AY695257-1|AAW21974.1|  224|Tribolium castaneum intermediate
           neuroblasts defectiveprotein protein.
          Length = 224

 Score = 28.7 bits (61), Expect = 0.052
 Identities = 16/61 (26%), Positives = 28/61 (45%), Gaps = 2/61 (3%)
 Frame = +2

Query: 188 VSEKNTVIVKHDA--KQIHLEQNHQYPSKPRNDPSPHYLPSRTYRTGPSPHAPPHQTLQP 361
           +++ N +   H A  + + L    + PS  R+ P      S +  T P+P  PP + L P
Sbjct: 52  LAQNNQLFTHHKAPIRPVALPPKREIPSPKRSSPILAEKVSVSPTTPPTPSPPPEERLTP 111

Query: 362 A 364
           +
Sbjct: 112 S 112


>AY321476-2|AAQ23387.1|  257|Tribolium castaneum Ase protein.
          Length = 257

 Score = 24.6 bits (51), Expect = 0.85
 Identities = 11/26 (42%), Positives = 13/26 (50%)
 Frame = +2

Query: 299 PSRTYRTGPSPHAPPHQTLQPAPHTA 376
           PS T     +P  PPH T Q  P+ A
Sbjct: 135 PSTTDDLSTNPTPPPHYTYQIIPYEA 160


>AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory receptor
           candidate 53 protein.
          Length = 659

 Score = 22.2 bits (45), Expect = 4.6
 Identities = 9/32 (28%), Positives = 19/32 (59%)
 Frame = +3

Query: 435 SCNGHRPTTQLLLQ*NRRFXVLHLHIFTENLV 530
           SC+ H   ++L+ Q N  + ++ L +FT + +
Sbjct: 215 SCDLHHRLSKLIKQLNATYGLILLLMFTSHFI 246


>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
           variant 2 protein.
          Length = 1558

 Score = 21.4 bits (43), Expect = 8.0
 Identities = 9/21 (42%), Positives = 11/21 (52%)
 Frame = +2

Query: 86  GLPKGEPNFAPYNYPPYRAYE 148
           GL  G+P F     PPY  +E
Sbjct: 428 GLRNGDPCFFHDTIPPYLFFE 448


>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
           variant 1 protein.
          Length = 1558

 Score = 21.4 bits (43), Expect = 8.0
 Identities = 9/21 (42%), Positives = 11/21 (52%)
 Frame = +2

Query: 86  GLPKGEPNFAPYNYPPYRAYE 148
           GL  G+P F     PPY  +E
Sbjct: 428 GLRNGDPCFFHDTIPPYLFFE 448


>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase
           CHS1B protein.
          Length = 1558

 Score = 21.4 bits (43), Expect = 8.0
 Identities = 9/21 (42%), Positives = 11/21 (52%)
 Frame = +2

Query: 86  GLPKGEPNFAPYNYPPYRAYE 148
           GL  G+P F     PPY  +E
Sbjct: 428 GLRNGDPCFFHDTIPPYLFFE 448


>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase
           CHS1A protein.
          Length = 1558

 Score = 21.4 bits (43), Expect = 8.0
 Identities = 9/21 (42%), Positives = 11/21 (52%)
 Frame = +2

Query: 86  GLPKGEPNFAPYNYPPYRAYE 148
           GL  G+P F     PPY  +E
Sbjct: 428 GLRNGDPCFFHDTIPPYLFFE 448


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 151,294
Number of Sequences: 336
Number of extensions: 3410
Number of successful extensions: 14
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 20027417
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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