Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= br--0024
         (650 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.          23   1.6  
X97819-1|CAA66399.1|  251|Tribolium castaneum ZEN Tc protein.          23   2.2  
AM292373-1|CAL23185.2|  360|Tribolium castaneum gustatory recept...    23   2.2  
AM292353-1|CAL23165.2|  651|Tribolium castaneum gustatory recept...    23   2.2  
AF321227-4|AAK16424.1|  246|Tribolium castaneum Zen protein.           23   2.2  
EF125544-1|ABL73928.1|  279|Tribolium castaneum obstractor B pro...    22   5.0  
AY043293-1|AAK96033.1|  523|Tribolium castaneum homeodomain tran...    21   8.8  
AF187069-1|AAF03889.1|  471|Tribolium castaneum proboscipedia or...    21   8.8  
AF187068-1|AAF03888.1|  477|Tribolium castaneum proboscipedia or...    21   8.8  

>DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.
          Length = 822

 Score = 23.4 bits (48), Expect = 1.6
 Identities = 8/14 (57%), Positives = 12/14 (85%)
 Frame = +2

Query: 314 FQSGEGVGESLQGL 355
           FQ G+G+G+ LQG+
Sbjct: 172 FQPGKGLGKDLQGI 185


>X97819-1|CAA66399.1|  251|Tribolium castaneum ZEN Tc protein.
          Length = 251

 Score = 23.0 bits (47), Expect = 2.2
 Identities = 10/38 (26%), Positives = 18/38 (47%)
 Frame = -2

Query: 646 ITQPPAPWRDSRRRPVPSATTTLQFLFWVGLRTARPER 533
           IT PP+ W   +    P  ++ LQ      ++  +P+R
Sbjct: 45  ITYPPSDWNCPQYNAPPYMSSVLQLPTVTEIQETQPQR 82


>AM292373-1|CAL23185.2|  360|Tribolium castaneum gustatory receptor
           candidate 52 protein.
          Length = 360

 Score = 23.0 bits (47), Expect = 2.2
 Identities = 9/27 (33%), Positives = 15/27 (55%)
 Frame = +1

Query: 166 LMQQHGNFVESSVRPLVVSAQVYHWSW 246
           ++Q H N  E S   L V++  + WS+
Sbjct: 102 MVQNHNNIREKSHYCLFVASNCFFWSY 128


>AM292353-1|CAL23165.2|  651|Tribolium castaneum gustatory receptor
           candidate 32 protein.
          Length = 651

 Score = 23.0 bits (47), Expect = 2.2
 Identities = 9/27 (33%), Positives = 15/27 (55%)
 Frame = +1

Query: 166 LMQQHGNFVESSVRPLVVSAQVYHWSW 246
           ++Q H N  E S   L V++  + WS+
Sbjct: 102 MVQNHNNIREKSHYCLFVASNCFFWSY 128


>AF321227-4|AAK16424.1|  246|Tribolium castaneum Zen protein.
          Length = 246

 Score = 23.0 bits (47), Expect = 2.2
 Identities = 10/38 (26%), Positives = 18/38 (47%)
 Frame = -2

Query: 646 ITQPPAPWRDSRRRPVPSATTTLQFLFWVGLRTARPER 533
           IT PP+ W   +    P  ++ LQ      ++  +P+R
Sbjct: 36  ITYPPSDWNCPQYNAPPYMSSVLQLPTVTEIQETQPQR 73


>EF125544-1|ABL73928.1|  279|Tribolium castaneum obstractor B
           protein.
          Length = 279

 Score = 21.8 bits (44), Expect = 5.0
 Identities = 9/23 (39%), Positives = 13/23 (56%)
 Frame = -2

Query: 643 TQPPAPWRDSRRRPVPSATTTLQ 575
           T  P P + SRR+P P   T ++
Sbjct: 252 TPKPRPTKVSRRKPRPPRPTQVE 274


>AY043293-1|AAK96033.1|  523|Tribolium castaneum homeodomain
           transcription factor Maxillopediaprotein.
          Length = 523

 Score = 21.0 bits (42), Expect = 8.8
 Identities = 8/13 (61%), Positives = 10/13 (76%)
 Frame = -1

Query: 524 NVSSTCPPARARG 486
           NVS+T PP  +RG
Sbjct: 268 NVSNTIPPFASRG 280


>AF187069-1|AAF03889.1|  471|Tribolium castaneum proboscipedia
           ortholog protein.
          Length = 471

 Score = 21.0 bits (42), Expect = 8.8
 Identities = 8/13 (61%), Positives = 10/13 (76%)
 Frame = -1

Query: 524 NVSSTCPPARARG 486
           NVS+T PP  +RG
Sbjct: 216 NVSNTIPPFASRG 228


>AF187068-1|AAF03888.1|  477|Tribolium castaneum proboscipedia
           ortholog protein.
          Length = 477

 Score = 21.0 bits (42), Expect = 8.8
 Identities = 8/13 (61%), Positives = 10/13 (76%)
 Frame = -1

Query: 524 NVSSTCPPARARG 486
           NVS+T PP  +RG
Sbjct: 399 NVSNTIPPFASRG 411


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 142,123
Number of Sequences: 336
Number of extensions: 3196
Number of successful extensions: 10
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 16760905
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)