SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt10b02
         (711 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.          24   1.4  
EF222295-1|ABN79655.1|  146|Tribolium castaneum arginine vasopre...    23   3.2  
U81040-1|AAB39356.1|  283|Tribolium castaneum TC Deformed protein.     22   4.3  
U81038-1|AAB39355.1|  412|Tribolium castaneum transcription fact...    22   4.3  
AF321227-3|AAK16423.1|  412|Tribolium castaneum Dfd protein.           22   4.3  
AF243042-1|AAF68438.1|  126|Tribolium castaneum mutant transcrip...    22   4.3  
AY675073-1|AAV74190.1|  533|Tribolium castaneum chitinase 5 prot...    21   7.5  
AY043293-2|AAK96034.1|  353|Tribolium castaneum homeodomain tran...    21   7.5  
AF230313-1|AAF64147.1|  210|Tribolium castaneum labial protein p...    21   7.5  
AF230312-1|AAF64146.1|  253|Tribolium castaneum labial protein p...    21   7.5  
DQ414246-1|ABD63008.1|  126|Tribolium castaneum odd-skipped prot...    21   9.9  
AF017415-1|AAB70262.1|  343|Tribolium castaneum abdominal-AII pr...    21   9.9  
AF017414-1|AAB70260.1|  209|Tribolium castaneum abdominal-AII pr...    21   9.9  

>DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.
          Length = 822

 Score = 23.8 bits (49), Expect = 1.4
 Identities = 10/51 (19%), Positives = 22/51 (43%)
 Frame = +3

Query: 462 PWIPLFSGWMGLATCRLIQGMTQAALYPSMHTMLGKWAPLSERGRLSTYVY 614
           P I L   WM L    ++  +    + P +   +  W PL++   +  +++
Sbjct: 496 PLITLIETWMPLLPQWILDNIYDQLIMPRIQAEVNIWNPLTDTIPIHVWIH 546


>EF222295-1|ABN79655.1|  146|Tribolium castaneum arginine
           vasopressin-like peptide protein.
          Length = 146

 Score = 22.6 bits (46), Expect = 3.2
 Identities = 10/38 (26%), Positives = 17/38 (44%)
 Frame = +3

Query: 198 TGHAVTESELCSNVSTSENTSCVTEEISAWSVYRTYNW 311
           TG    +   CS  S   + SC +++ S   +Y   N+
Sbjct: 101 TGRCAFDGICCSQDSCHADKSCASDDKSPIDLYTLINY 138


>U81040-1|AAB39356.1|  283|Tribolium castaneum TC Deformed protein.
          Length = 283

 Score = 22.2 bits (45), Expect = 4.3
 Identities = 8/23 (34%), Positives = 12/23 (52%)
 Frame = -2

Query: 197 YGYHRHAELSPHGVRHG*TYKQY 129
           YGYH H   + + + +G  Y  Y
Sbjct: 62  YGYHNHQNYNSNVLSNGYGYGNY 84


>U81038-1|AAB39355.1|  412|Tribolium castaneum transcription factor
           Deformed protein.
          Length = 412

 Score = 22.2 bits (45), Expect = 4.3
 Identities = 8/23 (34%), Positives = 12/23 (52%)
 Frame = -2

Query: 197 YGYHRHAELSPHGVRHG*TYKQY 129
           YGYH H   + + + +G  Y  Y
Sbjct: 62  YGYHNHQNYNSNVLSNGYGYGNY 84


>AF321227-3|AAK16423.1|  412|Tribolium castaneum Dfd protein.
          Length = 412

 Score = 22.2 bits (45), Expect = 4.3
 Identities = 8/23 (34%), Positives = 12/23 (52%)
 Frame = -2

Query: 197 YGYHRHAELSPHGVRHG*TYKQY 129
           YGYH H   + + + +G  Y  Y
Sbjct: 62  YGYHNHQNYNSNVLSNGYGYGNY 84


>AF243042-1|AAF68438.1|  126|Tribolium castaneum mutant
           transcription factor TcDfd1 protein.
          Length = 126

 Score = 22.2 bits (45), Expect = 4.3
 Identities = 8/23 (34%), Positives = 12/23 (52%)
 Frame = -2

Query: 197 YGYHRHAELSPHGVRHG*TYKQY 129
           YGYH H   + + + +G  Y  Y
Sbjct: 62  YGYHNHQNYNSNVLSNGYGYGNY 84


>AY675073-1|AAV74190.1|  533|Tribolium castaneum chitinase 5
           protein.
          Length = 533

 Score = 21.4 bits (43), Expect = 7.5
 Identities = 9/28 (32%), Positives = 15/28 (53%)
 Frame = +1

Query: 22  ERRLSTRGYQRMTNMKGHHQKFRHQKAL 105
           E  +   G++  TN+K  H K + Q A+
Sbjct: 74  ELDVDQNGFRNFTNLKKTHPKVKLQVAV 101


>AY043293-2|AAK96034.1|  353|Tribolium castaneum homeodomain
           transcription factor Labialprotein.
          Length = 353

 Score = 21.4 bits (43), Expect = 7.5
 Identities = 6/13 (46%), Positives = 10/13 (76%)
 Frame = +2

Query: 359 HHHDDPDGYNSAE 397
           +H++DP GY  +E
Sbjct: 42  YHYEDPYGYTGSE 54


>AF230313-1|AAF64147.1|  210|Tribolium castaneum labial protein
           protein.
          Length = 210

 Score = 21.4 bits (43), Expect = 7.5
 Identities = 6/13 (46%), Positives = 10/13 (76%)
 Frame = +2

Query: 359 HHHDDPDGYNSAE 397
           +H++DP GY  +E
Sbjct: 42  YHYEDPYGYTGSE 54


>AF230312-1|AAF64146.1|  253|Tribolium castaneum labial protein
           protein.
          Length = 253

 Score = 21.4 bits (43), Expect = 7.5
 Identities = 6/13 (46%), Positives = 10/13 (76%)
 Frame = +2

Query: 359 HHHDDPDGYNSAE 397
           +H++DP GY  +E
Sbjct: 42  YHYEDPYGYTGSE 54


>DQ414246-1|ABD63008.1|  126|Tribolium castaneum odd-skipped
           protein.
          Length = 126

 Score = 21.0 bits (42), Expect = 9.9
 Identities = 6/13 (46%), Positives = 7/13 (53%)
 Frame = +2

Query: 671 YTGPWLXPLYFGY 709
           Y  PW  P Y+ Y
Sbjct: 33  YCDPWYNPYYYQY 45


>AF017415-1|AAB70262.1|  343|Tribolium castaneum abdominal-AII
           protein.
          Length = 343

 Score = 21.0 bits (42), Expect = 9.9
 Identities = 7/15 (46%), Positives = 10/15 (66%)
 Frame = +1

Query: 73  HHQKFRHQKALAPAT 117
           +HQ+F HQ+    AT
Sbjct: 14  YHQQFHHQQLFQSAT 28


>AF017414-1|AAB70260.1|  209|Tribolium castaneum abdominal-AII
           protein.
          Length = 209

 Score = 21.0 bits (42), Expect = 9.9
 Identities = 7/15 (46%), Positives = 10/15 (66%)
 Frame = +1

Query: 73  HHQKFRHQKALAPAT 117
           +HQ+F HQ+    AT
Sbjct: 14  YHQQFHHQQLFQSAT 28


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 183,180
Number of Sequences: 336
Number of extensions: 4315
Number of successful extensions: 15
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18843005
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

- SilkBase 1999-2023 -