Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= P5PG0026
         (343 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    27   0.053
AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.     24   0.50 
DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulati...    23   1.1  
DQ414247-1|ABD63009.2|  414|Tribolium castaneum paired protein.        23   1.1  
AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.    22   1.5  
AY043293-2|AAK96034.1|  353|Tribolium castaneum homeodomain tran...    21   3.5  
AF231104-1|AAF64149.1|  142|Tribolium castaneum labial protein p...    21   3.5  
AF231103-1|AAF64148.1|  142|Tribolium castaneum labial protein p...    21   3.5  
X91618-1|CAA62821.1|  524|Tribolium castaneum hunchback protein.       21   4.6  
AY884063-1|AAX84204.1|  682|Tribolium castaneum pro-phenol oxida...    20   6.1  
AJ621748-1|CAF21851.1|  228|Tribolium castaneum zinc finger tran...    20   6.1  
AF230312-1|AAF64146.1|  253|Tribolium castaneum labial protein p...    20   6.1  
X97819-1|CAA66399.1|  251|Tribolium castaneum ZEN Tc protein.          20   8.1  
AF321227-4|AAK16424.1|  246|Tribolium castaneum Zen protein.           20   8.1  

>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 27.1 bits (57), Expect = 0.053
 Identities = 8/13 (61%), Positives = 12/13 (92%)
 Frame = -3

Query: 53   LVPNSCSPGIHYS 15
            LVP +C+PG+HY+
Sbjct: 1229 LVPQNCAPGLHYN 1241


>AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.
          Length = 697

 Score = 23.8 bits (49), Expect = 0.50
 Identities = 14/28 (50%), Positives = 16/28 (57%), Gaps = 3/28 (10%)
 Frame = +2

Query: 242 PKCGDYV--SEFTLQPGDVGD-GQYLKK 316
           P+CGDYV     T+   DVG  G  LKK
Sbjct: 634 PQCGDYVPSGNSTVDCDDVGTFGAILKK 661


>DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulation
           protein.
          Length = 947

 Score = 22.6 bits (46), Expect = 1.1
 Identities = 8/19 (42%), Positives = 9/19 (47%)
 Frame = -3

Query: 176 PSVRSKEASGRPGGCCRRC 120
           P     E   RPG CC+ C
Sbjct: 90  PEPTCDEPVHRPGRCCKTC 108


>DQ414247-1|ABD63009.2|  414|Tribolium castaneum paired protein.
          Length = 414

 Score = 22.6 bits (46), Expect = 1.1
 Identities = 8/26 (30%), Positives = 16/26 (61%)
 Frame = -3

Query: 233 PLPVPVSVQLTPLVARALRPSVRSKE 156
           PLP  + +++  + A  +RP V S++
Sbjct: 54  PLPNHIRLKIVEMAANGIRPCVISRQ 79


>AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.
          Length = 717

 Score = 22.2 bits (45), Expect = 1.5
 Identities = 8/16 (50%), Positives = 9/16 (56%)
 Frame = +2

Query: 236 NRPKCGDYVSEFTLQP 283
           N P CGD+V E    P
Sbjct: 699 NFPTCGDHVPEINSNP 714


>AY043293-2|AAK96034.1|  353|Tribolium castaneum homeodomain
           transcription factor Labialprotein.
          Length = 353

 Score = 21.0 bits (42), Expect = 3.5
 Identities = 8/11 (72%), Positives = 8/11 (72%)
 Frame = -3

Query: 98  PRPAVRSSCRG 66
           P PA RSSC G
Sbjct: 231 PNPASRSSCLG 241


>AF231104-1|AAF64149.1|  142|Tribolium castaneum labial protein
          protein.
          Length = 142

 Score = 21.0 bits (42), Expect = 3.5
 Identities = 8/11 (72%), Positives = 8/11 (72%)
 Frame = -3

Query: 98 PRPAVRSSCRG 66
          P PA RSSC G
Sbjct: 20 PNPASRSSCLG 30


>AF231103-1|AAF64148.1|  142|Tribolium castaneum labial protein
          protein.
          Length = 142

 Score = 21.0 bits (42), Expect = 3.5
 Identities = 8/11 (72%), Positives = 8/11 (72%)
 Frame = -3

Query: 98 PRPAVRSSCRG 66
          P PA RSSC G
Sbjct: 20 PNPASRSSCLG 30


>X91618-1|CAA62821.1|  524|Tribolium castaneum hunchback protein.
          Length = 524

 Score = 20.6 bits (41), Expect = 4.6
 Identities = 7/12 (58%), Positives = 9/12 (75%)
 Frame = -1

Query: 73  AEDYDRASCRIP 38
           AE+YD  S R+P
Sbjct: 180 AEEYDEQSLRVP 191


>AY884063-1|AAX84204.1|  682|Tribolium castaneum pro-phenol oxidase
           subunit 1 protein.
          Length = 682

 Score = 20.2 bits (40), Expect = 6.1
 Identities = 8/12 (66%), Positives = 9/12 (75%)
 Frame = +2

Query: 236 NRPKCGDYVSEF 271
           NRP  GD +SEF
Sbjct: 563 NRPTGGDALSEF 574


>AJ621748-1|CAF21851.1|  228|Tribolium castaneum zinc finger
           transcription factor protein.
          Length = 228

 Score = 20.2 bits (40), Expect = 6.1
 Identities = 8/14 (57%), Positives = 9/14 (64%)
 Frame = +1

Query: 4   GGALE*WIPGLQEF 45
           GG L  W+P LQ F
Sbjct: 208 GGFLPKWLPPLQGF 221


>AF230312-1|AAF64146.1|  253|Tribolium castaneum labial protein
           protein.
          Length = 253

 Score = 20.2 bits (40), Expect = 6.1
 Identities = 8/11 (72%), Positives = 8/11 (72%)
 Frame = -3

Query: 98  PRPAVRSSCRG 66
           P PA RSSC G
Sbjct: 231 PDPASRSSCLG 241


>X97819-1|CAA66399.1|  251|Tribolium castaneum ZEN Tc protein.
          Length = 251

 Score = 19.8 bits (39), Expect = 8.1
 Identities = 15/41 (36%), Positives = 22/41 (53%)
 Frame = +2

Query: 41  NSARGTIVVLCKNFSQPAVVSTSDISSSDGNNHQAVQRLLS 163
           ++ R +      + S  +V ST+  SS+D   HQ V RLLS
Sbjct: 152 STPRSSPAETASSLSPQSVASTA--SSAD---HQIVDRLLS 187


>AF321227-4|AAK16424.1|  246|Tribolium castaneum Zen protein.
          Length = 246

 Score = 19.8 bits (39), Expect = 8.1
 Identities = 15/41 (36%), Positives = 22/41 (53%)
 Frame = +2

Query: 41  NSARGTIVVLCKNFSQPAVVSTSDISSSDGNNHQAVQRLLS 163
           ++ R +      + S  +V ST+  SS+D   HQ V RLLS
Sbjct: 143 STPRSSPAETASSLSPQSVASTA--SSAD---HQIVDRLLS 178


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 75,456
Number of Sequences: 336
Number of extensions: 1549
Number of successful extensions: 16
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16
length of database: 122,585
effective HSP length: 50
effective length of database: 105,785
effective search space used:  6664455
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 38 (20.3 bits)