Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Nnor0031
         (350 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U09586-2|AAC47271.1|  712|Tribolium castaneum protease, reverse ...    22   2.1  
AJ850291-1|CAH64511.1|  533|Tribolium castaneum putative esteras...    22   2.1  
AJ850289-1|CAH64509.1|  533|Tribolium castaneum putative esteras...    22   2.1  
EF592538-1|ABQ95984.1|  582|Tribolium castaneum beta-N-acetylglu...    21   3.7  
EF633444-1|ABR32189.1|  721|Tribolium castaneum heat shock prote...    20   8.5  

>U09586-2|AAC47271.1|  712|Tribolium castaneum protease, reverse
           transcriptase andRNase H protein.
          Length = 712

 Score = 21.8 bits (44), Expect = 2.1
 Identities = 7/13 (53%), Positives = 9/13 (69%)
 Frame = -2

Query: 163 PVRTCRQKQHSHS 125
           P+ TC +KQH  S
Sbjct: 240 PITTCNKKQHLES 252



 Score = 19.8 bits (39), Expect = 8.5
 Identities = 10/30 (33%), Positives = 17/30 (56%)
 Frame = +3

Query: 225 AIVRDPRLLDELDRESSPVSSWSNVGRTGD 314
           A +++   L  + RE+SP +S   VG+  D
Sbjct: 323 ATIQEMLDLGVIKREASPYASPMTVGKKKD 352


>AJ850291-1|CAH64511.1|  533|Tribolium castaneum putative esterase
           protein.
          Length = 533

 Score = 21.8 bits (44), Expect = 2.1
 Identities = 11/24 (45%), Positives = 13/24 (54%), Gaps = 3/24 (12%)
 Frame = +3

Query: 279 VSSWSNVGRTGDVLPT---PLSNV 341
           V  W+N  + GD  PT   PL NV
Sbjct: 465 VKLWTNFAKNGDPNPTEENPLINV 488


>AJ850289-1|CAH64509.1|  533|Tribolium castaneum putative esterase
           protein.
          Length = 533

 Score = 21.8 bits (44), Expect = 2.1
 Identities = 11/24 (45%), Positives = 13/24 (54%), Gaps = 3/24 (12%)
 Frame = +3

Query: 279 VSSWSNVGRTGDVLPT---PLSNV 341
           V  W+N  + GD  PT   PL NV
Sbjct: 465 VKLWTNFAKNGDPNPTEENPLINV 488


>EF592538-1|ABQ95984.1|  582|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG3 protein.
          Length = 582

 Score = 21.0 bits (42), Expect = 3.7
 Identities = 10/23 (43%), Positives = 14/23 (60%)
 Frame = +3

Query: 225 AIVRDPRLLDELDRESSPVSSWS 293
           ++VR  RLL E+D  S   + WS
Sbjct: 294 SLVRGVRLLLEVDAPSHVNAGWS 316


>EF633444-1|ABR32189.1|  721|Tribolium castaneum heat shock protein
           90 protein.
          Length = 721

 Score = 19.8 bits (39), Expect = 8.5
 Identities = 6/9 (66%), Positives = 8/9 (88%)
 Frame = -3

Query: 69  NAQELVPEY 43
           N +EL+PEY
Sbjct: 362 NCEELIPEY 370


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 94,634
Number of Sequences: 336
Number of extensions: 2038
Number of successful extensions: 6
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 50
effective length of database: 105,785
effective search space used:  6981810
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)