Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV120075.Seq
         (786 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF263515-1|AAF74207.1|  126|Tribolium castaneum cytochrome P450 ...    22   4.8  
AM292359-1|CAL23171.2|  436|Tribolium castaneum gustatory recept...    21   8.4  
AJ845189-1|CAH60166.1|  515|Tribolium castaneum putative esteras...    21   8.4  

>AF263515-1|AAF74207.1|  126|Tribolium castaneum cytochrome P450
           monooxygenase protein.
          Length = 126

 Score = 22.2 bits (45), Expect = 4.8
 Identities = 7/10 (70%), Positives = 9/10 (90%)
 Frame = -2

Query: 176 RFLPTNCDRQ 147
           RFLP NCD++
Sbjct: 111 RFLPENCDKR 120


>AM292359-1|CAL23171.2|  436|Tribolium castaneum gustatory receptor
           candidate 38 protein.
          Length = 436

 Score = 21.4 bits (43), Expect = 8.4
 Identities = 10/48 (20%), Positives = 20/48 (41%)
 Frame = -2

Query: 350 YESNKQPDYDMDLSDFSITEVEATQYLTLLLISNMPICIIIFLKITGC 207
           YE+ K  +   D  +F     + T+    +   N P+ + + L +  C
Sbjct: 150 YEARKLANVVTDWVNFERIYYKLTKKKLSVFFGNKPVILTVVLPLLAC 197


>AJ845189-1|CAH60166.1|  515|Tribolium castaneum putative esterase
           protein.
          Length = 515

 Score = 21.4 bits (43), Expect = 8.4
 Identities = 9/31 (29%), Positives = 14/31 (45%)
 Frame = -3

Query: 610 PLVTNFTNKMEFVVTETNDTSIPGEPILFTE 518
           P++  +T +   +V     T  PG P  F E
Sbjct: 300 PMIFGYTTREGMIVEMMRKTETPGMPNDFEE 330


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 163,533
Number of Sequences: 336
Number of extensions: 3319
Number of successful extensions: 6
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 21272645
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)