Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV120054.Seq
         (702 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z69735-1|CAA93623.1|  162|Tribolium castaneum initiation factor ...    23   1.8  
AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor ...    22   4.2  
EF222291-1|ABN79651.1|  374|Tribolium castaneum cardioactive pep...    22   5.6  
DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulati...    22   5.6  
AY884063-1|AAX84204.1|  682|Tribolium castaneum pro-phenol oxida...    21   9.7  

>Z69735-1|CAA93623.1|  162|Tribolium castaneum initiation factor
           5-like protein protein.
          Length = 162

 Score = 23.4 bits (48), Expect = 1.8
 Identities = 10/20 (50%), Positives = 14/20 (70%)
 Frame = +1

Query: 523 NPTVDWNNATDRLQSKRSKR 582
           NP V  ++ T+  +SKRSKR
Sbjct: 63  NPAVQGSSLTEGKRSKRSKR 82


>AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor
           protein protein.
          Length = 585

 Score = 22.2 bits (45), Expect = 4.2
 Identities = 9/14 (64%), Positives = 11/14 (78%), Gaps = 1/14 (7%)
 Frame = -3

Query: 118 FCATSPC-SAFVCS 80
           FCATSPC +  VC+
Sbjct: 341 FCATSPCQNGGVCT 354


>EF222291-1|ABN79651.1|  374|Tribolium castaneum cardioactive
           peptide receptor 1 protein.
          Length = 374

 Score = 21.8 bits (44), Expect = 5.6
 Identities = 9/18 (50%), Positives = 11/18 (61%)
 Frame = +1

Query: 340 NDRFVGSRGSIPRGQAQT 393
           N R   SRG IPR + +T
Sbjct: 232 NSRRASSRGLIPRAKVKT 249


>DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulation
           protein.
          Length = 947

 Score = 21.8 bits (44), Expect = 5.6
 Identities = 11/42 (26%), Positives = 17/42 (40%)
 Frame = -3

Query: 145 SCFLKSSSVFCATSPCSAFVCSVNVAISLVTNCLFFSSCCLI 20
           +CF ++ +  C T  C    C  N+ +  V        CC I
Sbjct: 695 TCFCENGNNKCFTMECPQVTCPDNMKLEKVP-----GECCAI 731


>AY884063-1|AAX84204.1|  682|Tribolium castaneum pro-phenol oxidase
           subunit 1 protein.
          Length = 682

 Score = 21.0 bits (42), Expect = 9.7
 Identities = 9/23 (39%), Positives = 11/23 (47%)
 Frame = -1

Query: 447 WPVIAVNVVPSRVTHSTGCLRLS 379
           WP   VN VP  +      +RLS
Sbjct: 282 WPARPVNQVPRDLNREVDQIRLS 304


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 147,572
Number of Sequences: 336
Number of extensions: 2939
Number of successful extensions: 6
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18530690
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)