Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NRPG0033
         (678 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM295014-1|CAL25729.1|  407|Tribolium castaneum ultraspiracle nu...    22   5.3  
AM292361-1|CAL23173.2|  373|Tribolium castaneum gustatory recept...    22   5.3  
U14732-1|AAC46491.1|  322|Tribolium castaneum fushi-tarazu protein.    21   7.0  
EF468474-1|ABR25244.1|  516|Tribolium castaneum methoprene-toler...    21   7.0  
AY043292-2|AAK96032.1|  290|Tribolium castaneum homeodomain tran...    21   7.0  
AF322227-1|AAK01654.1|  782|Tribolium castaneum cell surface pro...    21   7.0  
AF321227-1|AAK16421.1|  290|Tribolium castaneum Ftz protein.           21   7.0  
AM292349-1|CAL23161.1|  248|Tribolium castaneum gustatory recept...    21   9.3  

>AM295014-1|CAL25729.1|  407|Tribolium castaneum ultraspiracle
           nuclear receptor protein.
          Length = 407

 Score = 21.8 bits (44), Expect = 5.3
 Identities = 7/16 (43%), Positives = 11/16 (68%)
 Frame = +2

Query: 317 RSLGIVCSERIIYFNL 364
           RS+G+ C E + +F L
Sbjct: 372 RSIGLKCLEHLFFFKL 387


>AM292361-1|CAL23173.2|  373|Tribolium castaneum gustatory receptor
           candidate 40 protein.
          Length = 373

 Score = 21.8 bits (44), Expect = 5.3
 Identities = 8/12 (66%), Positives = 9/12 (75%)
 Frame = +2

Query: 341 ERIIYFNLQKPW 376
           E II+FNL K W
Sbjct: 274 EGIIFFNLAKSW 285


>U14732-1|AAC46491.1|  322|Tribolium castaneum fushi-tarazu protein.
          Length = 322

 Score = 21.4 bits (43), Expect = 7.0
 Identities = 8/17 (47%), Positives = 10/17 (58%)
 Frame = -3

Query: 55  FTAKLMVHDTCMQKLQP 5
           FT  L  +DTC Q + P
Sbjct: 82  FTQHLSQYDTCQQGIYP 98


>EF468474-1|ABR25244.1|  516|Tribolium castaneum methoprene-tolerant
           protein.
          Length = 516

 Score = 21.4 bits (43), Expect = 7.0
 Identities = 9/21 (42%), Positives = 13/21 (61%)
 Frame = +3

Query: 75  FENSTIDYITRKRICCQLCGC 137
           FE S  +Y+TR  I  ++ GC
Sbjct: 245 FEASREEYVTRHLIDGRIIGC 265


>AY043292-2|AAK96032.1|  290|Tribolium castaneum homeodomain
           transcription factor Fushitarazu protein.
          Length = 290

 Score = 21.4 bits (43), Expect = 7.0
 Identities = 8/17 (47%), Positives = 10/17 (58%)
 Frame = -3

Query: 55  FTAKLMVHDTCMQKLQP 5
           FT  L  +DTC Q + P
Sbjct: 82  FTQHLSQYDTCQQGIYP 98


>AF322227-1|AAK01654.1|  782|Tribolium castaneum cell surface
           protein chaoptin protein.
          Length = 782

 Score = 21.4 bits (43), Expect = 7.0
 Identities = 8/19 (42%), Positives = 12/19 (63%)
 Frame = -3

Query: 232 IKILRMFFRDLQSTVKSFF 176
           IK+L + F ++ S  K FF
Sbjct: 225 IKVLDLSFNNITSVAKQFF 243


>AF321227-1|AAK16421.1|  290|Tribolium castaneum Ftz protein.
          Length = 290

 Score = 21.4 bits (43), Expect = 7.0
 Identities = 8/17 (47%), Positives = 10/17 (58%)
 Frame = -3

Query: 55  FTAKLMVHDTCMQKLQP 5
           FT  L  +DTC Q + P
Sbjct: 82  FTQHLSQYDTCQQGIYP 98


>AM292349-1|CAL23161.1|  248|Tribolium castaneum gustatory receptor
           candidate 28 protein.
          Length = 248

 Score = 21.0 bits (42), Expect = 9.3
 Identities = 6/13 (46%), Positives = 10/13 (76%)
 Frame = +2

Query: 260 VFICVDTAVWQAC 298
           VF  +D ++W+AC
Sbjct: 230 VFTLIDYSLWKAC 242


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 159,370
Number of Sequences: 336
Number of extensions: 3593
Number of successful extensions: 10
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 17697850
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)