Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NRPG0025
         (713 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292361-1|CAL23173.2|  373|Tribolium castaneum gustatory recept...    21   7.5  
S73225-1|AAB30811.1|  327|Tribolium castaneum protein ( Triboliu...    21   9.9  
EF592537-1|ABQ95983.1|  593|Tribolium castaneum beta-N-acetylglu...    21   9.9  
DQ494421-1|ABF55372.1|   73|Tribolium castaneum telomerase rever...    21   9.9  
DQ372925-1|ABD17350.1|  596|Tribolium castaneum telomerase rever...    21   9.9  

>AM292361-1|CAL23173.2|  373|Tribolium castaneum gustatory receptor
           candidate 40 protein.
          Length = 373

 Score = 21.4 bits (43), Expect = 7.5
 Identities = 5/16 (31%), Positives = 10/16 (62%)
 Frame = +1

Query: 331 ESPDRYEITFRQWNIV 378
           E P++   TF+ W ++
Sbjct: 48  EEPEKLHFTFKSWKVL 63


>S73225-1|AAB30811.1|  327|Tribolium castaneum protein ( Tribolium
           castaneum homeodomainprotein mRNA, complete cds. ).
          Length = 327

 Score = 21.0 bits (42), Expect = 9.9
 Identities = 10/22 (45%), Positives = 13/22 (59%)
 Frame = +1

Query: 64  NTLQDGRQSPSPRCLHGHRSTK 129
           +TL  GR+SPS   +    STK
Sbjct: 58  STLDPGRKSPSSPRISSPSSTK 79


>EF592537-1|ABQ95983.1|  593|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG2 protein.
          Length = 593

 Score = 21.0 bits (42), Expect = 9.9
 Identities = 7/27 (25%), Positives = 13/27 (48%)
 Frame = +2

Query: 230 TDDKFVIWDSHAIATYLLNKYGKGSSY 310
           +D   ++W SH     ++ KY   + Y
Sbjct: 430 SDTPIILWTSHLTQADVIEKYLSKARY 456


>DQ494421-1|ABF55372.1|   73|Tribolium castaneum telomerase reverse
           transcriptase protein.
          Length = 73

 Score = 21.0 bits (42), Expect = 9.9
 Identities = 10/18 (55%), Positives = 12/18 (66%)
 Frame = -2

Query: 484 LLREIIS*LYFGQTLRLE 431
           LL+EII   YFG T  L+
Sbjct: 51  LLQEIIPKSYFGTTTNLK 68


>DQ372925-1|ABD17350.1|  596|Tribolium castaneum telomerase reverse
           transcriptase protein.
          Length = 596

 Score = 21.0 bits (42), Expect = 9.9
 Identities = 10/18 (55%), Positives = 12/18 (66%)
 Frame = -2

Query: 484 LLREIIS*LYFGQTLRLE 431
           LL+EII   YFG T  L+
Sbjct: 51  LLQEIIPKSYFGTTTNLK 68


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 172,743
Number of Sequences: 336
Number of extensions: 3993
Number of successful extensions: 8
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18947110
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)