Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NRPG0011
         (684 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM712901-1|CAN84640.1|  205|Tribolium castaneum hypothetical pro...    23   3.1  
AM292359-1|CAL23171.2|  436|Tribolium castaneum gustatory recept...    22   4.1  
AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory recept...    22   5.4  
AF321227-1|AAK16421.1|  290|Tribolium castaneum Ftz protein.           21   9.4  

>AM712901-1|CAN84640.1|  205|Tribolium castaneum hypothetical
           protein protein.
          Length = 205

 Score = 22.6 bits (46), Expect = 3.1
 Identities = 9/34 (26%), Positives = 17/34 (50%)
 Frame = -2

Query: 545 ICLRFIIYYHNILKLHYIASLKYISAHVYLITLM 444
           IC  ++  YH      +   LKY    +Y++T++
Sbjct: 21  ICDSYLKIYHKEKYRKFCRILKYFIIAIYVLTIL 54


>AM292359-1|CAL23171.2|  436|Tribolium castaneum gustatory receptor
           candidate 38 protein.
          Length = 436

 Score = 22.2 bits (45), Expect = 4.1
 Identities = 8/14 (57%), Positives = 11/14 (78%)
 Frame = +3

Query: 630 VFFFCVYLYLIFSL 671
           V F C+YL+LI +L
Sbjct: 288 VTFLCLYLFLIITL 301


>AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory receptor
           candidate 48 protein.
          Length = 408

 Score = 21.8 bits (44), Expect = 5.4
 Identities = 6/18 (33%), Positives = 13/18 (72%)
 Frame = +3

Query: 624 IFVFFFCVYLYLIFSLGY 677
           +FVF + +YL+ ++ + Y
Sbjct: 144 VFVFCYFIYLFTVYYIYY 161


>AF321227-1|AAK16421.1|  290|Tribolium castaneum Ftz protein.
          Length = 290

 Score = 21.0 bits (42), Expect = 9.4
 Identities = 8/30 (26%), Positives = 17/30 (56%)
 Frame = -2

Query: 635 KNENLNFLNIHSNKTYNVKLKDELYKNI*F 546
           KN+N      H+N+ Y+   ++ +Y++  F
Sbjct: 31  KNQNTEHNYTHNNEMYHSVKEEPIYESCRF 60


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 139,460
Number of Sequences: 336
Number of extensions: 2831
Number of successful extensions: 5
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 17906060
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)