Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP01_F_A19
         (880 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292359-1|CAL23171.2|  436|Tribolium castaneum gustatory recept...    22   7.3  
AY600514-1|AAT11862.1|  242|Tribolium castaneum iroquois-like pr...    21   9.7  
AM292377-1|CAL23189.2|  358|Tribolium castaneum gustatory recept...    21   9.7  
AM292342-1|CAL23154.2|  386|Tribolium castaneum gustatory recept...    21   9.7  

>AM292359-1|CAL23171.2|  436|Tribolium castaneum gustatory receptor
           candidate 38 protein.
          Length = 436

 Score = 21.8 bits (44), Expect = 7.3
 Identities = 11/24 (45%), Positives = 11/24 (45%)
 Frame = -2

Query: 678 HFLIADNSKYXVINNLSQLKGKFW 607
           HF I     Y  IN L  L G FW
Sbjct: 209 HFKIIQVVPYCYINCLIYLIGGFW 232


>AY600514-1|AAT11862.1|  242|Tribolium castaneum iroquois-like
           protein protein.
          Length = 242

 Score = 21.4 bits (43), Expect = 9.7
 Identities = 13/40 (32%), Positives = 22/40 (55%)
 Frame = +1

Query: 586 RTRAQPEPKLSFQLAQVVDDXVFAIVSDEKVIQELEAEDE 705
           R R + E K++++     DD   A+VSD    +E + ED+
Sbjct: 139 RRRLKKENKMTWEPKNKTDDDDDALVSDSD-DREKDEEDK 177


>AM292377-1|CAL23189.2|  358|Tribolium castaneum gustatory receptor
           candidate 56 protein.
          Length = 358

 Score = 21.4 bits (43), Expect = 9.7
 Identities = 8/16 (50%), Positives = 12/16 (75%)
 Frame = -1

Query: 121 LKHALRYYRHLFASLL 74
           L+  LRY+  +F+SLL
Sbjct: 84  LQQKLRYFEEVFSSLL 99


>AM292342-1|CAL23154.2|  386|Tribolium castaneum gustatory receptor
           candidate 21 protein.
          Length = 386

 Score = 21.4 bits (43), Expect = 9.7
 Identities = 8/16 (50%), Positives = 12/16 (75%)
 Frame = -1

Query: 121 LKHALRYYRHLFASLL 74
           L+  LRY+  +F+SLL
Sbjct: 84  LQQKLRYFEEVFSSLL 99


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 158,789
Number of Sequences: 336
Number of extensions: 2867
Number of successful extensions: 6
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 57
effective length of database: 103,433
effective search space used: 24306755
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)