Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0001_A05
         (410 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY043292-1|AAK96031.1|  323|Tribolium castaneum homeodomain tran...    26   0.17 
AF228509-1|AAF69136.1|  325|Tribolium castaneum prothoraxless pr...    26   0.17 
AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr...    23   1.2  
AY887136-1|AAW78361.1|  580|Tribolium castaneum vasa RNA helicas...    21   3.6  
X72339-1|CAA51066.1|  133|Tribolium castaneum abdominal protein.       21   6.2  
AY675073-1|AAV74190.1|  533|Tribolium castaneum chitinase 5 prot...    21   6.2  
AF017415-2|AAB70263.1|  284|Tribolium castaneum abdominal-A prot...    21   6.2  
AF017415-1|AAB70262.1|  343|Tribolium castaneum abdominal-AII pr...    21   6.2  
AJ829922-1|CAH25640.1|  193|Tribolium castaneum twist bHLH trans...    20   8.2  

>AY043292-1|AAK96031.1|  323|Tribolium castaneum homeodomain
           transcription factor Prothoraxlessprotein.
          Length = 323

 Score = 25.8 bits (54), Expect = 0.17
 Identities = 8/33 (24%), Positives = 18/33 (54%)
 Frame = +3

Query: 48  EADHQEHHDTY*EESGVLHGGRRADPGRDQGAP 146
           +  H +HH  + ++  +++GG++      QG P
Sbjct: 172 QEQHPQHHQPHHQQQHMMYGGQQGANMHQQGPP 204


>AF228509-1|AAF69136.1|  325|Tribolium castaneum prothoraxless
           protein.
          Length = 325

 Score = 25.8 bits (54), Expect = 0.17
 Identities = 8/33 (24%), Positives = 18/33 (54%)
 Frame = +3

Query: 48  EADHQEHHDTY*EESGVLHGGRRADPGRDQGAP 146
           +  H +HH  + ++  +++GG++      QG P
Sbjct: 174 QEQHPQHHQPHHQQQHMMYGGQQGANMHQQGPP 206



 Score = 20.6 bits (41), Expect = 6.2
 Identities = 12/28 (42%), Positives = 13/28 (46%), Gaps = 2/28 (7%)
 Frame = +3

Query: 51  ADHQEHHDTY*EESGVLHGGRR--ADPG 128
           A+H   H  Y     V  GGRR  A PG
Sbjct: 21  AEHPHQHQHYGAAVQVPQGGRRRAARPG 48


>AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like
           protein protein.
          Length = 1156

 Score = 23.0 bits (47), Expect = 1.2
 Identities = 9/20 (45%), Positives = 11/20 (55%)
 Frame = -2

Query: 334 PTTGSRSAAPSRFPCPAPIH 275
           P   S S+ P  FP  AP+H
Sbjct: 179 PLISSSSSPPGVFPVDAPMH 198


>AY887136-1|AAW78361.1|  580|Tribolium castaneum vasa RNA helicase
           protein.
          Length = 580

 Score = 21.4 bits (43), Expect = 3.6
 Identities = 8/16 (50%), Positives = 10/16 (62%)
 Frame = +1

Query: 328 SSGGLSKGRDREHGEG 375
           S GG   GRD + G+G
Sbjct: 91  SGGGRGGGRDGDRGDG 106


>X72339-1|CAA51066.1|  133|Tribolium castaneum abdominal protein.
          Length = 133

 Score = 20.6 bits (41), Expect = 6.2
 Identities = 6/10 (60%), Positives = 7/10 (70%)
 Frame = +3

Query: 45  HEADHQEHHD 74
           H + HQ HHD
Sbjct: 101 HSSIHQHHHD 110


>AY675073-1|AAV74190.1|  533|Tribolium castaneum chitinase 5
           protein.
          Length = 533

 Score = 20.6 bits (41), Expect = 6.2
 Identities = 9/26 (34%), Positives = 14/26 (53%)
 Frame = +1

Query: 190 FSLVGIPPAPRGVPQIEVCFDIDANG 267
           +S +G+  A   V  I+   D+D NG
Sbjct: 56  YSFIGVNDADWSVLVIDPELDVDQNG 81


>AF017415-2|AAB70263.1|  284|Tribolium castaneum abdominal-A
           protein.
          Length = 284

 Score = 20.6 bits (41), Expect = 6.2
 Identities = 6/10 (60%), Positives = 7/10 (70%)
 Frame = +3

Query: 45  HEADHQEHHD 74
           H + HQ HHD
Sbjct: 252 HSSIHQHHHD 261


>AF017415-1|AAB70262.1|  343|Tribolium castaneum abdominal-AII
           protein.
          Length = 343

 Score = 20.6 bits (41), Expect = 6.2
 Identities = 6/10 (60%), Positives = 7/10 (70%)
 Frame = +3

Query: 45  HEADHQEHHD 74
           H + HQ HHD
Sbjct: 311 HSSIHQHHHD 320


>AJ829922-1|CAH25640.1|  193|Tribolium castaneum twist bHLH
           transcription factor protein.
          Length = 193

 Score = 20.2 bits (40), Expect = 8.2
 Identities = 13/54 (24%), Positives = 20/54 (37%)
 Frame = +1

Query: 25  ETLGGVFTKLITRNTTIPTKKSQVFSTAADGQTQVEIKVHQGEREMATDNKLLG 186
           ++L   F  L     T+P+ K     T       ++   H    E A D  L+G
Sbjct: 110 QSLNEAFASLRKSIPTMPSDKLSKIQTLKLAARYIDFLYHVLSNENALDVDLIG 163


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.315    0.133    0.378 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 76,251
Number of Sequences: 336
Number of extensions: 1390
Number of successful extensions: 13
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 122,585
effective HSP length: 51
effective length of database: 105,449
effective search space used:  8963165
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.6 bits)