Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP01_FL5_A13
         (879 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EU019711-1|ABU25223.1|  534|Tribolium castaneum chitin deacetyla...    23   3.2  
EF222291-1|ABN79651.1|  374|Tribolium castaneum cardioactive pep...    21   9.7  
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    21   9.7  

>EU019711-1|ABU25223.1|  534|Tribolium castaneum chitin deacetylase
           1 protein.
          Length = 534

 Score = 23.0 bits (47), Expect = 3.2
 Identities = 7/15 (46%), Positives = 12/15 (80%)
 Frame = +1

Query: 1   YWVDQLS*NVDDLYY 45
           YWVD++  N +D+Y+
Sbjct: 441 YWVDEILANHNDVYF 455


>EF222291-1|ABN79651.1|  374|Tribolium castaneum cardioactive
           peptide receptor 1 protein.
          Length = 374

 Score = 21.4 bits (43), Expect = 9.7
 Identities = 7/9 (77%), Positives = 9/9 (100%)
 Frame = +3

Query: 141 RTIGSLPPY 167
           RT+GSLPP+
Sbjct: 316 RTLGSLPPF 324


>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
            candidate 46 protein.
          Length = 1451

 Score = 21.4 bits (43), Expect = 9.7
 Identities = 11/20 (55%), Positives = 11/20 (55%)
 Frame = -3

Query: 94   AFCRTSYSTSEEKR*QNNIS 35
            A C   YST EEK  Q N S
Sbjct: 1374 AVCDACYSTIEEKNLQVNES 1393


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 110,296
Number of Sequences: 336
Number of extensions: 1687
Number of successful extensions: 12
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 122,585
effective HSP length: 57
effective length of database: 103,433
effective search space used: 24306755
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)