SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV40019
         (842 letters)

Database: spombe 
           5004 sequences; 2,362,478 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SPBC530.10c |anc1||adenine nucleotide carrier Anc1|Schizosacchar...    96   5e-21
SPAC328.09 |||2-oxoadipate and 2-oxoglutarate transporter |Schiz...    48   1e-06
SPAC139.02c |oac1||anion transporter|Schizosaccharomyces pombe|c...    44   3e-05
SPAC19G12.05 |||mitochondrial citrate transporter|Schizosaccharo...    42   8e-05
SPBC12D12.05c |||mitochondrial carrier, calcium binding subfamil...    40   3e-04
SPAC8C9.12c |||iron ion transporter |Schizosaccharomyces pombe|c...    36   0.005
SPAC4G9.20c |||mitochondrial carrier with solute carrier repeats...    35   0.013
SPAC688.09 |||pyrimidine nucletide transporter |Schizosaccharomy...    33   0.038
SPAPB17E12.12c |||mitochondrial transporter|Schizosaccharomyces ...    33   0.067
SPAC823.10c |||mitochondrial carrier with solute carrier repeats...    32   0.12 
SPAC1527.01 |mok11|SPAC23D3.15|alpha-1,3-glucan synthase Mok11|S...    29   0.82 
SPBC1604.04 |||thiamine pyrophosphate transporter|Schizosaccharo...    27   2.5  
SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual    27   3.3  
SPAC17H9.08 |||mitochondrial coenzyme A transporter|Schizosaccha...    27   4.4  
SPCC18B5.05c |||phosphomethylpyrimidine kinase |Schizosaccharomy...    26   7.7  
SPAC227.03c |||mitochondrial NAD+ transporter|Schizosaccharomyce...    26   7.7  

>SPBC530.10c |anc1||adenine nucleotide carrier
           Anc1|Schizosaccharomyces pombe|chr 2|||Manual
          Length = 322

 Score = 96.3 bits (229), Expect = 5e-21
 Identities = 48/114 (42%), Positives = 68/114 (59%), Gaps = 1/114 (0%)
 Frame = +2

Query: 2   IYRASYFGFYDTARGM-LPDPKNTPIVISWAIAQTVTTVAGIISYPFDTVRRRMMMQSGR 178
           +YR  YFG YDT + + L  P     + S+ +   VTT +G+ SYP DT+RRRMMM SG 
Sbjct: 207 VYRGLYFGMYDTLKPVVLVGPLEGNFLASFLLGWAVTTGSGVASYPLDTIRRRMMMTSGE 266

Query: 179 AKSDILYKNTIHCWATIAKTEGTSGLFKGAFSNVLRGTGGAFVLVLYDEIKKVL 340
           A   + Y ++  C   I   EG    FKGA +N+LRG  GA VL +YD+++ ++
Sbjct: 267 A---VKYSSSFECGRQILAKEGARSFFKGAGANILRGVAGAGVLSIYDQVQLLM 317



 Score = 28.7 bits (61), Expect = 1.1
 Identities = 19/82 (23%), Positives = 35/82 (42%), Gaps = 3/82 (3%)
 Frame = +2

Query: 50  LPDPKNTPIVISWAIAQTVTTVAGIISYPFDTVRRRMMMQSGRAKSDIL---YKNTIHCW 220
           + + KN+     + +      V+   + P + V+  +  Q    ++  L   YK    C+
Sbjct: 19  ITETKNSTFFFDFMMGGVSAAVSKTAAAPIERVKLLIQNQDEMIRAGRLSHRYKGIGECF 78

Query: 221 ATIAKTEGTSGLFKGAFSNVLR 286
              A  EG   L++G  +NVLR
Sbjct: 79  KRTAAEEGVISLWRGNTANVLR 100


>SPAC328.09 |||2-oxoadipate and 2-oxoglutarate transporter
           |Schizosaccharomyces pombe|chr 1|||Manual
          Length = 298

 Score = 48.4 bits (110), Expect = 1e-06
 Identities = 33/112 (29%), Positives = 52/112 (46%), Gaps = 3/112 (2%)
 Frame = +2

Query: 2   IYRASYFGFYDTARGML-PDPKNTPIVISWAIAQTVTTVAG-IISYPFDTVRRRMMMQSG 175
           ++ A YFG     R  L P       + +  IA T+  + G  +S PFD ++ R+     
Sbjct: 173 VWNAGYFGVIQKIRNSLTPASSRIGEIRNNLIAGTIGGIFGTFLSTPFDVIKSRIQTVPR 232

Query: 176 RAKSDILYKNTIHCWATIAKTEGTSGLFKGAFSNVLR-GTGGAFVLVLYDEI 328
            A     Y        T+A+ EG + L+KG    VLR G GG  +LV+++ +
Sbjct: 233 IAGQVPKYNWAYPALVTVAREEGFTALYKGFVPKVLRLGPGGGILLVVFNSV 284



 Score = 39.9 bits (89), Expect = 4e-04
 Identities = 25/74 (33%), Positives = 38/74 (51%), Gaps = 1/74 (1%)
 Frame = +2

Query: 65  NTPIVISWAIAQTVTTVAGIIS-YPFDTVRRRMMMQSGRAKSDILYKNTIHCWATIAKTE 241
           N P  +++A A  V  ++ +++ YP D V+ RM +  G  KSD  Y  T  C   I K E
Sbjct: 5   NIPFPVTFA-AGAVAGISEVLTLYPLDVVKTRMQLSVG--KSD--YNGTFDCLKKIVKNE 59

Query: 242 GTSGLFKGAFSNVL 283
           G   L++G    +L
Sbjct: 60  GPHRLYRGILPPIL 73


>SPAC139.02c |oac1||anion transporter|Schizosaccharomyces pombe|chr
           1|||Manual
          Length = 320

 Score = 44.0 bits (99), Expect = 3e-05
 Identities = 33/114 (28%), Positives = 51/114 (44%), Gaps = 8/114 (7%)
 Frame = +2

Query: 23  GFYDTARG-----MLPDPKNTPIVISWAIAQTVTTVAGIISYPFDTVRRRMMMQSGR--A 181
           GFY+  R       L DPK   + I+ A          +   PF  V+ RM   S +   
Sbjct: 106 GFYEPIRRTLNTWFLDDPKGNKLAINVASGAGSGLCGALFGSPFFLVKTRMQSYSPKFPV 165

Query: 182 KSDILYKNTIHCWATIAKTEGTSGLFKGAFSNVLRGTGGAFV-LVLYDEIKKVL 340
                YK+  + ++ I K  G  GLF GA + +LR   G+ V L +Y+  K+++
Sbjct: 166 GQQYGYKHIFNAFSRIIKENGVKGLFVGADAAILRTVSGSSVQLPIYNWAKRMI 219



 Score = 33.1 bits (72), Expect = 0.051
 Identities = 20/50 (40%), Positives = 27/50 (54%)
 Frame = +2

Query: 137 FDTVRRRMMMQSGRAKSDILYKNTIHCWATIAKTEGTSGLFKGAFSNVLR 286
           FDTV  RM  Q    K+  LYKN I C     ++EG   L+KG  +++ R
Sbjct: 250 FDTVMTRMYNQ----KNKELYKNPIDCILKTIRSEGFFALYKGFGAHLAR 295


>SPAC19G12.05 |||mitochondrial citrate
           transporter|Schizosaccharomyces pombe|chr 1|||Manual
          Length = 291

 Score = 42.3 bits (95), Expect = 8e-05
 Identities = 28/110 (25%), Positives = 49/110 (44%), Gaps = 1/110 (0%)
 Frame = +2

Query: 14  SYFGFYDTARGMLPDPKNTPIVISWAIAQTVTTVAGIISYPFDTVRRRMMMQSGRAKSDI 193
           +Y     + +  LP  +    V ++ +      +    + P DTV+ RM  QS  A  + 
Sbjct: 183 AYNSIKQSLQSRLPPDEKLSTVTTFLVGSVAGIITVYCTQPIDTVKSRM--QSLSASKE- 239

Query: 194 LYKNTIHCWATIAKTEGTSGLFKGAFSNVLR-GTGGAFVLVLYDEIKKVL 340
            YKN+IHC   I   +G    + GA   + R    G  V  +Y+++ ++L
Sbjct: 240 -YKNSIHCAYKILTQDGLLRFWSGATPRLARLILSGGIVFTVYEKVMEIL 288


>SPBC12D12.05c |||mitochondrial carrier, calcium binding
           subfamily|Schizosaccharomyces pombe|chr 2|||Manual
          Length = 426

 Score = 40.3 bits (90), Expect = 3e-04
 Identities = 27/112 (24%), Positives = 46/112 (41%), Gaps = 1/112 (0%)
 Frame = +2

Query: 8   RASYFGFYDTARGMLPDPKNTPIVISWAIAQTVTTVAGIISYPFDTVRRRMMMQSGRAKS 187
           + ++ G   +   + P     P  +  A      +    I +P + +R R+  Q G +  
Sbjct: 313 KRTWIGILASRDNVDPQDVKLPNGLVMAFGALSGSTGATIVFPLNVIRTRLQTQ-GTSAH 371

Query: 188 DILYKNTIHCWATIAKTEGTSGLFKGAFSNVLR-GTGGAFVLVLYDEIKKVL 340
              Y   I C+    K EG  GL+KG   N+L+     A   ++Y+  KK L
Sbjct: 372 PATYDGFIDCFYKTTKNEGFRGLYKGLSPNLLKVAPSVAISYLVYENCKKWL 423


>SPAC8C9.12c |||iron ion transporter |Schizosaccharomyces pombe|chr
           1|||Manual
          Length = 303

 Score = 36.3 bits (80), Expect = 0.005
 Identities = 20/83 (24%), Positives = 39/83 (46%)
 Frame = +2

Query: 11  ASYFGFYDTARGMLPDPKNTPIVISWAIAQTVTTVAGIISYPFDTVRRRMMMQSGRAKSD 190
           A YF   +  +  +    + P+  + A A  +T ++     PFD +++RM + S +    
Sbjct: 93  AIYFSVLEFFKSKINASPDRPLASALAGACAIT-ISDAFMTPFDVIKQRMQLPSRK---- 147

Query: 191 ILYKNTIHCWATIAKTEGTSGLF 259
             YK+ +HC  T+ + EG    +
Sbjct: 148 --YKSALHCATTVFRNEGLGAFY 168


>SPAC4G9.20c |||mitochondrial carrier with solute carrier
           repeats|Schizosaccharomyces pombe|chr 1|||Manual
          Length = 302

 Score = 35.1 bits (77), Expect = 0.013
 Identities = 16/48 (33%), Positives = 26/48 (54%)
 Frame = +2

Query: 122 IISYPFDTVRRRMMMQSGRAKSDILYKNTIHCWATIAKTEGTSGLFKG 265
           ++  PFD V+ R+  QS  +    +Y N + C   I+K EG +  +KG
Sbjct: 33  LVGQPFDCVKVRLQSQSNVSP---IYNNALDCVKKISKNEGLAAFYKG 77



 Score = 29.5 bits (63), Expect = 0.62
 Identities = 19/68 (27%), Positives = 31/68 (45%), Gaps = 1/68 (1%)
 Frame = +2

Query: 134 PFDTVRRRMMMQSGRAKSDILYKNTIHCWATIAKTEGTSGLFKGAFSNVLRGTGG-AFVL 310
           P + VR R+ +Q+G+   ++LY     C   I+   G SG+ KG      R   G     
Sbjct: 132 PVEHVRIRLQIQTGK---NVLYHGPWDCIKKISSQYGLSGIMKGYNPTAAREAHGLGMYF 188

Query: 311 VLYDEIKK 334
           + Y+ + K
Sbjct: 189 LAYEALVK 196


>SPAC688.09 |||pyrimidine nucletide transporter |Schizosaccharomyces
           pombe|chr 1|||Manual
          Length = 361

 Score = 33.5 bits (73), Expect = 0.038
 Identities = 25/83 (30%), Positives = 43/83 (51%), Gaps = 2/83 (2%)
 Frame = +2

Query: 89  AIAQTVTTVAGIISYPFDTVRRRMMM--QSGRAKSDILYKNTIHCWATIAKTEGTSGLFK 262
           AIA  +T+ A   + P   V+ R+ +  +SG+A     Y+++I C     + EG  GL+K
Sbjct: 170 AIAGVITSAA---TNPIWLVKTRLQLDKKSGQAAQ---YRSSIDCIIKTIRLEGFRGLYK 223

Query: 263 GAFSNVLRGTGGAFVLVLYDEIK 331
           G  +++L         VLY++ K
Sbjct: 224 GLSASLLGVGESTLQWVLYEKFK 246



 Score = 33.5 bits (73), Expect = 0.038
 Identities = 20/66 (30%), Positives = 32/66 (48%)
 Frame = +2

Query: 113 VAGIISYPFDTVRRRMMMQSGRAKSDILYKNTIHCWATIAKTEGTSGLFKGAFSNVLRGT 292
           +A  I+YP + VR R+  QS        Y   I C+  +   +G  GL+ G  +++LR  
Sbjct: 285 MAAGIAYPHEVVRTRLR-QSPSINGTPKYTGLIQCFKLVWMEQGIVGLYGGLTAHLLRVV 343

Query: 293 GGAFVL 310
             A +L
Sbjct: 344 PNACIL 349


>SPAPB17E12.12c |||mitochondrial transporter|Schizosaccharomyces
           pombe|chr 1|||Manual
          Length = 317

 Score = 32.7 bits (71), Expect = 0.067
 Identities = 19/54 (35%), Positives = 28/54 (51%)
 Frame = +2

Query: 125 ISYPFDTVRRRMMMQSGRAKSDILYKNTIHCWATIAKTEGTSGLFKGAFSNVLR 286
           +++P D +RRR  +          YKN       I KTEG +G F+G  SN+L+
Sbjct: 243 LTFPADVLRRRFQVNRIPGIGHN-YKNIKSAIFHIYKTEGINGFFRGYSSNMLK 295


>SPAC823.10c |||mitochondrial carrier with solute carrier
           repeats|Schizosaccharomyces pombe|chr 1|||Manual
          Length = 296

 Score = 31.9 bits (69), Expect = 0.12
 Identities = 24/84 (28%), Positives = 39/84 (46%)
 Frame = +2

Query: 35  TARGMLPDPKNTPIVISWAIAQTVTTVAGIISYPFDTVRRRMMMQSGRAKSDILYKNTIH 214
           + +G +P  +N   V+S  I+    T    I+ PFD ++ R+ ++        +YKN +H
Sbjct: 201 SVQGTVPH-RNIVNVMSGLISGATATA---ITNPFDMLKTRVQLEPH------IYKNFLH 250

Query: 215 CWATIAKTEGTSGLFKGAFSNVLR 286
               +   EG  G   G F  VLR
Sbjct: 251 SAKLVYANEGFRGFLDGFFLRVLR 274


>SPAC1527.01 |mok11|SPAC23D3.15|alpha-1,3-glucan synthase
            Mok11|Schizosaccharomyces pombe|chr 1|||Manual
          Length = 2397

 Score = 29.1 bits (62), Expect = 0.82
 Identities = 13/42 (30%), Positives = 22/42 (52%)
 Frame = +1

Query: 172  WSCQERYPVQEHHPLLGYHCQDRGNLGPLQGSLLQRPQRYWW 297
            WS   RY  + HH ++ Y  +  G+   +Q S L+ P + W+
Sbjct: 908  WSQSSRYGWKGHHIMVQYWSELTGSSNYMQESDLEYPYKRWF 949


>SPBC1604.04 |||thiamine pyrophosphate
           transporter|Schizosaccharomyces pombe|chr 2|||Manual
          Length = 314

 Score = 27.5 bits (58), Expect = 2.5
 Identities = 23/101 (22%), Positives = 45/101 (44%), Gaps = 1/101 (0%)
 Frame = +2

Query: 5   YRASYFGFYDTARGMLPDPKNTPIVISWAIAQTVTTVAG-IISYPFDTVRRRMMMQSGRA 181
           Y   +F FY  +  +L  P    + +S  ++  +       I +P DTV + +       
Sbjct: 171 YAGCFFMFYRASEAVL-SPLG--LALSSTLSGVIAGAGSKAIMFPVDTVVKTLQTFPSNY 227

Query: 182 KSDILYKNTIHCWATIAKTEGTSGLFKGAFSNVLRGTGGAF 304
           KS   +K+   C+ +I +  G  GL++G   ++L+   G +
Sbjct: 228 KS---FKD---CFLSIYRNSGIKGLYRGLSVSMLKVAPGRY 262


>SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual
          Length = 1611

 Score = 27.1 bits (57), Expect = 3.3
 Identities = 11/22 (50%), Positives = 15/22 (68%)
 Frame = -3

Query: 315  KTSTKAPPVPLRTLEKAPLKRP 250
            K S+KAPPVPL + +  P+  P
Sbjct: 1016 KLSSKAPPVPLPSADAPPIPVP 1037


>SPAC17H9.08 |||mitochondrial coenzyme A
           transporter|Schizosaccharomyces pombe|chr 1|||Manual
          Length = 326

 Score = 26.6 bits (56), Expect = 4.4
 Identities = 17/48 (35%), Positives = 23/48 (47%), Gaps = 1/48 (2%)
 Frame = +2

Query: 125 ISYPFDTVRRRMMMQSGRA-KSDILYKNTIHCWATIAKTEGTSGLFKG 265
           +SYPF+  RR+M +   R  KS +  K  +    T  K  G  G F G
Sbjct: 253 VSYPFEVCRRKMQIGGIRKNKSFLRLKQVVQ---TTYKEAGMRGFFVG 297


>SPCC18B5.05c |||phosphomethylpyrimidine kinase |Schizosaccharomyces
           pombe|chr 3|||Manual
          Length = 327

 Score = 25.8 bits (54), Expect = 7.7
 Identities = 10/24 (41%), Positives = 14/24 (58%)
 Frame = +2

Query: 44  GMLPDPKNTPIVISWAIAQTVTTV 115
           GMLPDPK+ P++        +T V
Sbjct: 89  GMLPDPKSIPVISQALTKYKITDV 112


>SPAC227.03c |||mitochondrial NAD+ transporter|Schizosaccharomyces
           pombe|chr 1|||Manual
          Length = 371

 Score = 25.8 bits (54), Expect = 7.7
 Identities = 13/48 (27%), Positives = 20/48 (41%)
 Frame = +2

Query: 197 YKNTIHCWATIAKTEGTSGLFKGAFSNVLRGTGGAFVLVLYDEIKKVL 340
           Y NT   +  I K EG +  ++G F ++           LY+  K  L
Sbjct: 230 YNNTFDAFRKIYKYEGLAAFYRGLFPSLFGTLHVGIQFPLYEYFKSFL 277


  Database: spombe
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 2,362,478
  Number of sequences in database:  5004
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,232,721
Number of Sequences: 5004
Number of extensions: 63235
Number of successful extensions: 194
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 175
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 192
length of database: 2,362,478
effective HSP length: 72
effective length of database: 2,002,190
effective search space used: 416455520
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

- SilkBase 1999-2023 -