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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV10392
         (814 letters)

Database: spombe 
           5004 sequences; 2,362,478 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SPBC800.05c |tub1|atb2, alp2, ban5|tubulin alpha 2|Schizosacchar...   155   5e-39
SPBC16A3.15c |nda2||tubulin alpha 1|Schizosaccharomyces pombe|ch...   152   5e-38
SPBC26H8.07c |nda3|ben1, alp12|tubulin beta |Schizosaccharomyces...    97   2e-21
SPBC32F12.04 |tug1|gtb1|gamma-tubulin|Schizosaccharomyces pombe|...    69   6e-13
SPCC576.05 |||nucear export factor|Schizosaccharomyces pombe|chr...    28   1.8  
SPAC16A10.01 |||DUF1212 family protein|Schizosaccharomyces pombe...    27   3.2  
SPBC354.07c |||oxysterol binding protein |Schizosaccharomyces po...    27   3.2  
SPCC645.06c |rgf3|lad1|RhoGEF Rgf3|Schizosaccharomyces pombe|chr...    26   7.3  
SPCC16A11.08 |atg20||sorting nexin Atg20|Schizosaccharomyces pom...    25   9.7  
SPAC22F3.06c |lon1||Lon protease homolog Lon1|Schizosaccharomyce...    25   9.7  

>SPBC800.05c |tub1|atb2, alp2, ban5|tubulin alpha
           2|Schizosaccharomyces pombe|chr 2|||Manual
          Length = 449

 Score =  155 bits (377), Expect = 5e-39
 Identities = 66/95 (69%), Positives = 80/95 (84%)
 Frame = +2

Query: 224 FQHFLQRDRSCKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHY 403
           F  F       K+VPR+++VDLEP V+D+VRTG YR LFHPEQLITGKEDA+NNYARGHY
Sbjct: 49  FSTFFSETGQGKYVPRSIYVDLEPNVIDQVRTGPYRDLFHPEQLITGKEDASNNYARGHY 108

Query: 404 TIGKEIVDLVLDRIRKLADQCTGLQGFLIFHSFGG 508
           T+GKE+VD V D+IR++AD C+GLQGFL+FHSFGG
Sbjct: 109 TVGKELVDEVTDKIRRIADNCSGLQGFLVFHSFGG 143



 Score =  145 bits (352), Expect = 6e-36
 Identities = 63/84 (75%), Positives = 77/84 (91%)
 Frame = +1

Query: 511 TGSGFTSLLMERLSVDYGKKSKLEFAIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMV 690
           TGSGF +LL+ERL+++Y KKSKL+F++YPAPQVST+VVEPYNS+LTTH TL+ +DC FMV
Sbjct: 145 TGSGFGALLLERLAMEYTKKSKLQFSVYPAPQVSTSVVEPYNSVLTTHATLDLADCTFMV 204

Query: 691 DNEAIYDICRRNLDIERPTYTNLN 762
           DNE+ YDICRRNLDIERP+Y NLN
Sbjct: 205 DNESCYDICRRNLDIERPSYENLN 228



 Score = 94.3 bits (224), Expect = 2e-20
 Identities = 41/63 (65%), Positives = 45/63 (71%)
 Frame = +3

Query: 81  MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAAS 260
           MRE IS+HVGQAG QIGNACWELYCLEHGIQP+G M  +      D  F+TFFSETG   
Sbjct: 1   MREIISIHVGQAGTQIGNACWELYCLEHGIQPNGYMNPETASQNSDGGFSTFFSETGQGK 60

Query: 261 TYP 269
             P
Sbjct: 61  YVP 63



 Score = 29.5 bits (63), Expect = 0.59
 Identities = 14/24 (58%), Positives = 17/24 (70%)
 Frame = +3

Query: 741 PNLHQPECLIGQIVSSITASLRFD 812
           P+      LI Q+VSSITASLRF+
Sbjct: 222 PSYENLNRLIAQVVSSITASLRFE 245


>SPBC16A3.15c |nda2||tubulin alpha 1|Schizosaccharomyces pombe|chr
           2|||Manual
          Length = 455

 Score =  152 bits (369), Expect = 5e-38
 Identities = 63/95 (66%), Positives = 80/95 (84%)
 Frame = +2

Query: 224 FQHFLQRDRSCKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHY 403
           F  F       K VPR+++VDLEP V+D+VRTG Y+ LFHPEQ++TGKEDA+NNYARGHY
Sbjct: 53  FGTFFSETGQGKFVPRSIYVDLEPNVIDQVRTGPYKDLFHPEQMVTGKEDASNNYARGHY 112

Query: 404 TIGKEIVDLVLDRIRKLADQCTGLQGFLIFHSFGG 508
           T+GKE++D VL+RIR++AD C+GLQGFL+FHSFGG
Sbjct: 113 TVGKEMIDSVLERIRRMADNCSGLQGFLVFHSFGG 147



 Score =  150 bits (363), Expect = 3e-37
 Identities = 65/84 (77%), Positives = 77/84 (91%)
 Frame = +1

Query: 511 TGSGFTSLLMERLSVDYGKKSKLEFAIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMV 690
           TGSG  +LL+ERL+++YGKKS L+F++YPAPQVST+VVEPYNS+LTTH TL++SDC FMV
Sbjct: 149 TGSGLGALLLERLNMEYGKKSNLQFSVYPAPQVSTSVVEPYNSVLTTHATLDNSDCTFMV 208

Query: 691 DNEAIYDICRRNLDIERPTYTNLN 762
           DNEA YDICRRNLDIERPTY NLN
Sbjct: 209 DNEACYDICRRNLDIERPTYENLN 232



 Score = 88.2 bits (209), Expect = 1e-18
 Identities = 45/68 (66%), Positives = 47/68 (69%), Gaps = 5/68 (7%)
 Frame = +3

Query: 81  MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTD-----KTIGGGDDSFNTFFSE 245
           MRE ISVHVGQAGVQIGNACWELYCLEHGI PDG  PT+     K     +D F TFFSE
Sbjct: 1   MREVISVHVGQAGVQIGNACWELYCLEHGIGPDG-FPTENSEVHKNNSYLNDGFGTFFSE 59

Query: 246 TGAASTYP 269
           TG     P
Sbjct: 60  TGQGKFVP 67



 Score = 28.3 bits (60), Expect = 1.4
 Identities = 13/15 (86%), Positives = 14/15 (93%)
 Frame = +3

Query: 765 LIGQIVSSITASLRF 809
           LI Q+VSSITASLRF
Sbjct: 234 LIAQVVSSITASLRF 248


>SPBC26H8.07c |nda3|ben1, alp12|tubulin beta |Schizosaccharomyces
           pombe|chr 2|||Manual
          Length = 448

 Score = 97.5 bits (232), Expect = 2e-21
 Identities = 43/84 (51%), Positives = 58/84 (69%)
 Frame = +2

Query: 257 KHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVL 436
           K+VPRAV VDLEP  +D V++G +  LF P+ +I G+  A N +A+GHYT G E+ D VL
Sbjct: 58  KYVPRAVLVDLEPGTMDAVKSGKFGNLFRPDNIIYGQSGAGNIWAKGHYTEGAELADAVL 117

Query: 437 DRIRKLADQCTGLQGFLIFHSFGG 508
           D +R+ A+ C  LQGF + HS GG
Sbjct: 118 DVVRREAEACDALQGFQLTHSLGG 141



 Score = 77.0 bits (181), Expect = 3e-15
 Identities = 35/84 (41%), Positives = 53/84 (63%)
 Frame = +1

Query: 511 TGSGFTSLLMERLSVDYGKKSKLEFAIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMV 690
           TGSG  +LL+ ++  +Y  +    F++ PAP+ S  VVEPYN+ L+ H  +E+SD  F +
Sbjct: 143 TGSGMGTLLLSKIREEYPDRMMATFSVAPAPKSSDTVVEPYNATLSMHQLVENSDETFCI 202

Query: 691 DNEAIYDICRRNLDIERPTYTNLN 762
           DNEA+  I    L I+ P+Y +LN
Sbjct: 203 DNEALSSIFANTLKIKSPSYDDLN 226



 Score = 36.3 bits (80), Expect = 0.005
 Identities = 19/63 (30%), Positives = 26/63 (41%)
 Frame = +3

Query: 81  MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAAS 260
           MRE + +  GQ G Q+G A W     EHG+   G      T     +  N +F+E     
Sbjct: 1   MREIVHIQAGQCGNQVGAAFWSTIADEHGLDSAGIY--HGTSEAQHERLNVYFNEAAGGK 58

Query: 261 TYP 269
             P
Sbjct: 59  YVP 61


>SPBC32F12.04 |tug1|gtb1|gamma-tubulin|Schizosaccharomyces pombe|chr
           2|||Manual
          Length = 446

 Score = 69.3 bits (162), Expect = 6e-13
 Identities = 35/94 (37%), Positives = 57/94 (60%), Gaps = 2/94 (2%)
 Frame = +2

Query: 233 FLQRDRSCKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKE--DAANNYARGHYT 406
           F Q D + +++PRA+ +DLEP VV+ + + TY  L++PE ++  K    A NN+A G Y+
Sbjct: 52  FYQSDDT-RYIPRAILIDLEPRVVNNILSDTYGSLYNPENILITKNGGGAGNNWANG-YS 109

Query: 407 IGKEIVDLVLDRIRKLADQCTGLQGFLIFHSFGG 508
             + I + ++D I + AD    L+GF + HS  G
Sbjct: 110 HAERIFEDIMDMIDREADGSDSLEGFSLLHSIAG 143



 Score = 59.3 bits (137), Expect = 6e-10
 Identities = 32/85 (37%), Positives = 47/85 (55%), Gaps = 1/85 (1%)
 Frame = +1

Query: 511 TGSGFTSLLMERLSVDYGKKSKLEFAIYPAPQ-VSTAVVEPYNSILTTHTTLEHSDCAFM 687
           TGSG  S L+ERL+  Y KK    ++++P  Q VS  VV+PYNS+L       ++D   +
Sbjct: 145 TGSGLGSFLLERLNDRYPKKIIQTYSVFPNSQSVSDVVVQPYNSLLALKRLTLNADSVVV 204

Query: 688 VDNEAIYDICRRNLDIERPTYTNLN 762
           +DN A+  I    L  + PT+   N
Sbjct: 205 LDNAALAHIAADRLHTQNPTFHQQN 229



 Score = 48.8 bits (111), Expect = 9e-07
 Identities = 24/55 (43%), Positives = 33/55 (60%)
 Frame = +3

Query: 84  RECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSET 248
           RE I++  GQ G QIG+  W+  CLEHGI PDG + +  T   G D  + FF ++
Sbjct: 3   REIITLQAGQCGNQIGSQFWQQLCLEHGIGPDGTLESFAT--EGVDRKDVFFYQS 55


>SPCC576.05 |||nucear export factor|Schizosaccharomyces pombe|chr
           3|||Manual
          Length = 1024

 Score = 27.9 bits (59), Expect = 1.8
 Identities = 16/37 (43%), Positives = 20/37 (54%), Gaps = 2/37 (5%)
 Frame = -1

Query: 316 ADLINNSRFKIDEDS--TGYVLAAPVSLKKVLKESSP 212
           AD+IN SR+ ID  S  T +    P+SL    KE  P
Sbjct: 455 ADIINGSRYNIDRVSPNTAFSTNIPLSLPFANKEPQP 491


>SPAC16A10.01 |||DUF1212 family protein|Schizosaccharomyces
           pombe|chr 1|||Manual
          Length = 830

 Score = 27.1 bits (57), Expect = 3.2
 Identities = 14/46 (30%), Positives = 25/46 (54%)
 Frame = -1

Query: 568 SCRSQRRDAPSIRK*TQSRYSTEGVEDQESLQTGTLVSELADSVQN 431
           S +       SIR  ++SR S+ G + Q S+Q+GT    ++D  ++
Sbjct: 98  SSQKSSNSRKSIRSQSRSRSSSVGSDSQASIQSGTNSEVVSDDEED 143


>SPBC354.07c |||oxysterol binding protein |Schizosaccharomyces
           pombe|chr 2|||Manual
          Length = 399

 Score = 27.1 bits (57), Expect = 3.2
 Identities = 14/58 (24%), Positives = 25/58 (43%), Gaps = 2/58 (3%)
 Frame = -1

Query: 349 FWMKQLSVCASADLINNSRF--KIDEDSTGYVLAAPVSLKKVLKESSPPPMVLSVGIW 182
           F    + +  S  +++N+ +  KID    GY      S K  + E +  P  +  G+W
Sbjct: 205 FMAPYIELYGSTYIVSNTNYITKIDYSGRGYFRGTKNSFKATIFEKNEDPDYIVEGVW 262


>SPCC645.06c |rgf3|lad1|RhoGEF Rgf3|Schizosaccharomyces pombe|chr
           3|||Manual
          Length = 1275

 Score = 25.8 bits (54), Expect = 7.3
 Identities = 13/22 (59%), Positives = 13/22 (59%)
 Frame = +2

Query: 179 WPDAHRQDHRGWRRFFQHFLQR 244
           W  A R D R  R  FQHFLQR
Sbjct: 590 WLAACRSDPRCRRLDFQHFLQR 611


>SPCC16A11.08 |atg20||sorting nexin Atg20|Schizosaccharomyces
           pombe|chr 3|||Manual
          Length = 534

 Score = 25.4 bits (53), Expect = 9.7
 Identities = 15/41 (36%), Positives = 21/41 (51%)
 Frame = +1

Query: 70  LKSKCVSASLYTLAKPESRSVMPAGSFTAWSTASSLMARCP 192
           L+S        +L+ P SR++ P  S +  STASSL    P
Sbjct: 170 LRSSMPLVMANSLSPPSSRALKPIHSLSNPSTASSLEPSSP 210


>SPAC22F3.06c |lon1||Lon protease homolog Lon1|Schizosaccharomyces
           pombe|chr 1|||Manual
          Length = 1067

 Score = 25.4 bits (53), Expect = 9.7
 Identities = 12/37 (32%), Positives = 22/37 (59%)
 Frame = -1

Query: 283 DEDSTGYVLAAPVSLKKVLKESSPPPMVLSVGIWPSG 173
           ++D T Y L  P+   + L +++PP +V+ +G  P G
Sbjct: 834 EKDLTKY-LGPPIYTSQRLYDTTPPGVVMGLGWTPMG 869


  Database: spombe
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 2,362,478
  Number of sequences in database:  5004
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,356,169
Number of Sequences: 5004
Number of extensions: 70941
Number of successful extensions: 221
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 200
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 218
length of database: 2,362,478
effective HSP length: 72
effective length of database: 2,002,190
effective search space used: 396433620
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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