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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= mg--0005
         (804 letters)

Database: spombe 
           5004 sequences; 2,362,478 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SPBC1703.12 |ubp9||ubiquitin C-terminal hydrolase Ubp9|Schizosac...    52   1e-07
SPBC713.02c |ubp21|ubpD, ubp15|ubiquitin C-terminal hydrolase Ub...    52   1e-07
SPCC188.08c |ubp22|ubp5|ubiquitin C-terminal hydrolase Ubp22|Sch...    46   5e-06
SPBC18H10.08c |ubp4||ubiquitin C-terminal hydrolase Ubp4|Schizos...    46   6e-06
SPCC1494.05c |ubp12||ubiquitin C-terminal hydrolase Ubp12|Schizo...    41   2e-04
SPBP8B7.21 |ubp3||ubiquitin C-terminal hydrolase Ubp3|Schizosacc...    39   0.001
SPAC6G9.08 |ubp6||ubiquitin C-terminal hydrolase Ubp6|Schizosacc...    35   0.012
SPAC328.06 |ubp2||ubiquitin C-terminal hydrolase Ubp2|Schizosacc...    35   0.016
SPCC1682.12c |ubp16||ubiquitin C-terminal hydrolase Ubp16|Schizo...    33   0.036
SPAC23G3.08c |ubp7||ubiquitin C-terminal hydrolase Ubp7|Schizosa...    32   0.11 
SPCC16A11.12c |ubp1||ubiquitin C-terminal hydrolase Ubp1|Schizos...    30   0.44 
SPBC6B1.06c |ubp14|ucp2|ubiquitin C-terminal hydrolase Ubp14|Sch...    29   0.77 
SPAC13A11.04c |ubp8||ubiquitin C-terminal hydrolase Ubp8|Schizos...    29   1.0  
SPBC776.13 |cnd1||condensin subunit Cnd1|Schizosaccharomyces pom...    28   1.8  
SPBC530.05 |||transcription factor |Schizosaccharomyces pombe|ch...    27   2.4  
SPBC19G7.09 |ulp1||SUMO deconjugating enzyme Ulp1|Schizosaccharo...    27   4.1  
SPAC20G8.06 |||CCR4-Not complex subunit Not1 |Schizosaccharomyce...    26   5.5  
SPBC19C7.08c |||leucine carboxyl methyltransferase|Schizosacchar...    26   5.5  
SPAC17A2.01 |bsu1|SPAC1B1.05, bsu1|high-affinity import carrier ...    26   7.2  
SPAC10F6.13c |||aspartate aminotransferase |Schizosaccharomyces ...    25   9.5  

>SPBC1703.12 |ubp9||ubiquitin C-terminal hydrolase
           Ubp9|Schizosaccharomyces pombe|chr 2|||Manual
          Length = 585

 Score = 51.6 bits (118), Expect = 1e-07
 Identities = 32/70 (45%), Positives = 38/70 (54%)
 Frame = +3

Query: 516 QQDAHEFLNFLINHINEIILAERNQSTLKVQKNNSGENVTCNGSVPHNTEPTWVHEIFQG 695
           QQDAHEF NFL+N + E         TL     N  +       V H   P WVH +F+G
Sbjct: 196 QQDAHEFFNFLLNSVTE---------TLDEYYGNHSD-------VMH---PKWVHSLFEG 236

Query: 696 TLTSETRCLT 725
           TLTSET+CLT
Sbjct: 237 TLTSETKCLT 246



 Score = 47.2 bits (107), Expect = 3e-06
 Identities = 18/42 (42%), Positives = 28/42 (66%)
 Frame = +1

Query: 235 VRAVPTYEHYFGLVNFGNTCYSNSVLQALYFCRPFREKVLEY 360
           +R     + ++GL N+GNTCY +SVL +LY  +PFR+ +  Y
Sbjct: 31  IRPETLTDRFYGLTNYGNTCYVSSVLVSLYHLKPFRDSLNSY 72



 Score = 37.9 bits (84), Expect = 0.002
 Identities = 17/44 (38%), Positives = 27/44 (61%)
 Frame = +1

Query: 382 KETLLTCLADLFYSIATQKKKVGSIAPKKFIARLRKEKEEFDIT 513
           KE + TCL DL+ S++    + G  +P++FI  LR++ E F  T
Sbjct: 151 KENIYTCLKDLYCSVSCCDCRYGICSPERFIQVLRRDNEAFRST 194


>SPBC713.02c |ubp21|ubpD, ubp15|ubiquitin C-terminal hydrolase
           Ubp21|Schizosaccharomyces pombe|chr 2|||Manual
          Length = 1129

 Score = 51.6 bits (118), Expect = 1e-07
 Identities = 23/64 (35%), Positives = 39/64 (60%)
 Frame = +1

Query: 262 YFGLVNFGNTCYSNSVLQALYFCRPFREKVLEYKAKNKRTKETLLTCLADLFYSIATQKK 441
           Y GL N G TCY NS+LQ+L+F   FR+ V +    N  +++++   L  +FY++  Q++
Sbjct: 229 YVGLKNQGATCYMNSLLQSLFFTNIFRKTVYKIPTDNDDSRDSVAYALQRVFYNLEKQRE 288

Query: 442 KVGS 453
            V +
Sbjct: 289 PVST 292


>SPCC188.08c |ubp22|ubp5|ubiquitin C-terminal hydrolase
           Ubp22|Schizosaccharomyces pombe|chr 3|||Manual
          Length = 1108

 Score = 46.4 bits (105), Expect = 5e-06
 Identities = 22/64 (34%), Positives = 34/64 (53%)
 Frame = +1

Query: 262 YFGLVNFGNTCYSNSVLQALYFCRPFREKVLEYKAKNKRTKETLLTCLADLFYSIATQKK 441
           Y GL N G TCY NS+LQ+LY    FR  V +    + + K+++   L   FY++    +
Sbjct: 212 YVGLKNQGATCYMNSLLQSLYIIHAFRRIVYQIPTDSPQGKDSIAYALQRCFYNLQFMNE 271

Query: 442 KVGS 453
            V +
Sbjct: 272 PVST 275


>SPBC18H10.08c |ubp4||ubiquitin C-terminal hydrolase
           Ubp4|Schizosaccharomyces pombe|chr 2|||Manual
          Length = 438

 Score = 46.0 bits (104), Expect = 6e-06
 Identities = 31/96 (32%), Positives = 48/96 (50%), Gaps = 9/96 (9%)
 Frame = +1

Query: 250 TYEHY--FGLVNFGNTCYSNSVLQALYFCRPFREKVLEYKA--KNKRTKETLLT--CLAD 411
           +YE+Y   GL N GNTCY N VLQ L+ C+     +L+ +   +N  TK  L T   +  
Sbjct: 65  SYENYQPIGLTNLGNTCYMNCVLQCLFACKDLTIPMLQGRGLLQNINTKNPLGTGGKITS 124

Query: 412 LFYSIATQ---KKKVGSIAPKKFIARLRKEKEEFDI 510
            F+S+           SI+P+ F+  ++    +F I
Sbjct: 125 AFFSLLQSVLLNHGQRSISPRNFLEIVQSLNRDFSI 160


>SPCC1494.05c |ubp12||ubiquitin C-terminal hydrolase
           Ubp12|Schizosaccharomyces pombe|chr 3|||Manual
          Length = 979

 Score = 40.7 bits (91), Expect = 2e-04
 Identities = 28/84 (33%), Positives = 40/84 (47%), Gaps = 5/84 (5%)
 Frame = +1

Query: 268 GLVNFGNTCYSNSVLQALYFCRPFREKVLEYKAKNKRTKETLLTC---LADLFYSI--AT 432
           GL N GNTCY NS LQ L   R  R+     + KN+  +   L     +A +F S+  + 
Sbjct: 312 GLSNLGNTCYMNSALQCLTHTRELRDFFTSDEWKNQVNESNPLGMGGQVASIFASLIKSL 371

Query: 433 QKKKVGSIAPKKFIARLRKEKEEF 504
              +  S AP++F A + K    F
Sbjct: 372 YSPEHSSFAPRQFKATIGKFNHSF 395



 Score = 25.4 bits (53), Expect = 9.5
 Identities = 10/19 (52%), Positives = 15/19 (78%)
 Frame = +3

Query: 510 YMQQDAHEFLNFLINHINE 566
           Y QQD+ EFL FL++ ++E
Sbjct: 398 YGQQDSQEFLAFLLDGLHE 416


>SPBP8B7.21 |ubp3||ubiquitin C-terminal hydrolase
           Ubp3|Schizosaccharomyces pombe|chr 2|||Manual
          Length = 512

 Score = 38.7 bits (86), Expect = 0.001
 Identities = 14/24 (58%), Positives = 18/24 (75%)
 Frame = +1

Query: 268 GLVNFGNTCYSNSVLQALYFCRPF 339
           G +N GN C+ NS+LQAL +C PF
Sbjct: 134 GFINTGNICFMNSILQALMYCVPF 157



 Score = 31.9 bits (69), Expect = 0.11
 Identities = 13/45 (28%), Positives = 24/45 (53%)
 Frame = +3

Query: 516 QQDAHEFLNFLINHINEIILAERNQSTLKVQKNNSGENVTCNGSV 650
           Q+DA EFLN  ++ ++E  + ER    LK  + N   ++  +  +
Sbjct: 226 QEDAEEFLNLFLDELHEEFVRERRHYLLKNDERNPKSDIKISNGI 270


>SPAC6G9.08 |ubp6||ubiquitin C-terminal hydrolase
           Ubp6|Schizosaccharomyces pombe|chr 1|||Manual
          Length = 467

 Score = 35.1 bits (77), Expect = 0.012
 Identities = 20/79 (25%), Positives = 34/79 (43%)
 Frame = +1

Query: 268 GLVNFGNTCYSNSVLQALYFCRPFREKVLEYKAKNKRTKETLLTCLADLFYSIATQKKKV 447
           GL+N GNTCY NS +Q L       + V ++ +      E         + ++    +  
Sbjct: 101 GLINLGNTCYMNSTVQMLRAIPELSDAVSQFNSSGGLVAE---------YRTLLNSMQSN 151

Query: 448 GSIAPKKFIARLRKEKEEF 504
             + P +F+  LR E  +F
Sbjct: 152 APVTPMRFLQSLRMEYPQF 170


>SPAC328.06 |ubp2||ubiquitin C-terminal hydrolase
           Ubp2|Schizosaccharomyces pombe|chr 1|||Manual
          Length = 1141

 Score = 34.7 bits (76), Expect = 0.016
 Identities = 13/30 (43%), Positives = 19/30 (63%)
 Frame = +1

Query: 268 GLVNFGNTCYSNSVLQALYFCRPFREKVLE 357
           GL N GN CY NS++Q  +  +P R  +L+
Sbjct: 615 GLENTGNLCYLNSLIQYYFIIKPLRNAILD 644


>SPCC1682.12c |ubp16||ubiquitin C-terminal hydrolase
           Ubp16|Schizosaccharomyces pombe|chr 3|||Manual
          Length = 457

 Score = 33.5 bits (73), Expect = 0.036
 Identities = 15/29 (51%), Positives = 19/29 (65%)
 Frame = +1

Query: 268 GLVNFGNTCYSNSVLQALYFCRPFREKVL 354
           GLVN GNTC+ NSVLQ +    P  + +L
Sbjct: 126 GLVNLGNTCFMNSVLQLMTQTPPLVQYLL 154



 Score = 26.2 bits (55), Expect = 5.5
 Identities = 8/15 (53%), Positives = 13/15 (86%)
 Frame = +3

Query: 510 YMQQDAHEFLNFLIN 554
           Y Q+DAHEF+ +L++
Sbjct: 210 YRQEDAHEFMRYLVD 224


>SPAC23G3.08c |ubp7||ubiquitin C-terminal hydrolase
           Ubp7|Schizosaccharomyces pombe|chr 1|||Manual
          Length = 875

 Score = 31.9 bits (69), Expect = 0.11
 Identities = 24/88 (27%), Positives = 37/88 (42%), Gaps = 9/88 (10%)
 Frame = +1

Query: 268 GLVNFGNTCYSNSVLQALYFCRPFREKVLEYKAKN------KRTKETLLTCLADLFYSIA 429
           GL N G TC+ NS LQ L  C    + +  ++  +      K TK    + L+     + 
Sbjct: 209 GLKNLGATCFFNSTLQVLCACEALHDVISPFQYSHSSVIVRKLTKSPESSLLSAFIKFLE 268

Query: 430 TQKKKVGSIA---PKKFIARLRKEKEEF 504
           T  K  G+I+   P  F    R+   +F
Sbjct: 269 TFYKSDGTISVYRPTTFFGEFRRLHPQF 296


>SPCC16A11.12c |ubp1||ubiquitin C-terminal hydrolase
           Ubp1|Schizosaccharomyces pombe|chr 3|||Manual
          Length = 849

 Score = 29.9 bits (64), Expect = 0.44
 Identities = 11/18 (61%), Positives = 13/18 (72%)
 Frame = +1

Query: 268 GLVNFGNTCYSNSVLQAL 321
           GL N GN+CY NS LQ +
Sbjct: 280 GLYNLGNSCYMNSALQCM 297


>SPBC6B1.06c |ubp14|ucp2|ubiquitin C-terminal hydrolase
           Ubp14|Schizosaccharomyces pombe|chr 2|||Manual
          Length = 775

 Score = 29.1 bits (62), Expect = 0.77
 Identities = 11/24 (45%), Positives = 16/24 (66%)
 Frame = +1

Query: 268 GLVNFGNTCYSNSVLQALYFCRPF 339
           GL N GN+CY  S +Q+L+  + F
Sbjct: 301 GLKNLGNSCYLASTMQSLFSIKEF 324


>SPAC13A11.04c |ubp8||ubiquitin C-terminal hydrolase
           Ubp8|Schizosaccharomyces pombe|chr 1|||Manual
          Length = 449

 Score = 28.7 bits (61), Expect = 1.0
 Identities = 17/61 (27%), Positives = 28/61 (45%), Gaps = 2/61 (3%)
 Frame = +1

Query: 268 GLVNFGNTCYSNSVLQALYFCRPFREKVLE-YKAKNKRTKETLLTC-LADLFYSIATQKK 441
           G+ N G TC+ + +LQ++      R      +       + T +TC + D+F SI   K 
Sbjct: 146 GIQNLGATCFMSVILQSILHNPLVRNLFFSGFHTSTDCKRPTCMTCAIDDMFSSIYNSKN 205

Query: 442 K 444
           K
Sbjct: 206 K 206


>SPBC776.13 |cnd1||condensin subunit Cnd1|Schizosaccharomyces
           pombe|chr 2|||Manual
          Length = 1158

 Score = 27.9 bits (59), Expect = 1.8
 Identities = 14/36 (38%), Positives = 21/36 (58%)
 Frame = -1

Query: 159 DICNSVLTTYQTNTRFSPPNEGV*NFSTVISRNIIN 52
           +I N VL+ Y+T     PPN G    +  I+RN+I+
Sbjct: 590 NIQNHVLSCYKTLFFEPPPNSGTNEAANYIARNLIS 625


>SPBC530.05 |||transcription factor |Schizosaccharomyces pombe|chr
           2|||Manual
          Length = 743

 Score = 27.5 bits (58), Expect = 2.4
 Identities = 13/37 (35%), Positives = 21/37 (56%)
 Frame = -1

Query: 714 SSRLLMFLGIFRAPKSVQCCEALNHYTSHSHRSCSFE 604
           +S +++F+ I + P +  C E LN   S  +R  SFE
Sbjct: 531 TSSIIIFISILKRPLASICSEDLNCLISVKNRLISFE 567


>SPBC19G7.09 |ulp1||SUMO deconjugating enzyme
           Ulp1|Schizosaccharomyces pombe|chr 2|||Manual
          Length = 568

 Score = 26.6 bits (56), Expect = 4.1
 Identities = 12/21 (57%), Positives = 13/21 (61%)
 Frame = +2

Query: 701 NKRDEVSHCETVSSKDEHFFD 763
           N +  VSH  T SSKDE F D
Sbjct: 114 NSKPTVSHSYTNSSKDEKFLD 134


>SPAC20G8.06 |||CCR4-Not complex subunit Not1 |Schizosaccharomyces
           pombe|chr 1|||Manual
          Length = 2100

 Score = 26.2 bits (55), Expect = 5.5
 Identities = 18/59 (30%), Positives = 29/59 (49%)
 Frame = +3

Query: 282 WQHLLQQLSVASFIFLSPIQRESIRVQS*E*KDQGNSINMPGRFIL*HSYSKEKSWINC 458
           W++ L QLS+ S I LSP     IR  +       +S+      ++ ++   EKS +NC
Sbjct: 358 WRNPLPQLSIISHIILSPTSMFDIREFNVNPVVSVDSLKDYSEELVNYAKIYEKSNLNC 416


>SPBC19C7.08c |||leucine carboxyl
           methyltransferase|Schizosaccharomyces pombe|chr
           2|||Manual
          Length = 681

 Score = 26.2 bits (55), Expect = 5.5
 Identities = 14/30 (46%), Positives = 16/30 (53%)
 Frame = -1

Query: 291 SVAKID*SEIMFVGGNCSDPISLSNCDIFA 202
           SV  ID    MF+GG  S    LS+C  FA
Sbjct: 430 SVVSIDKKTCMFIGGRESPKKILSSCIYFA 459


>SPAC17A2.01 |bsu1|SPAC1B1.05, bsu1|high-affinity import carrier for
           pyridoxine, pyridoxal, and pyridoxamine
           Bsu1|Schizosaccharomyces pombe|chr 1|||Manual
          Length = 526

 Score = 25.8 bits (54), Expect = 7.2
 Identities = 9/27 (33%), Positives = 17/27 (62%)
 Frame = +1

Query: 10  VTVVLRFSVSKRNIINNVSRNNCREVL 90
           + V+ R+  +K  I+  + +NN +EVL
Sbjct: 263 IKVITRYENAKGRIVEGIPKNNLKEVL 289


>SPAC10F6.13c |||aspartate aminotransferase |Schizosaccharomyces
           pombe|chr 1|||Manual
          Length = 409

 Score = 25.4 bits (53), Expect = 9.5
 Identities = 9/20 (45%), Positives = 13/20 (65%)
 Frame = +3

Query: 282 WQHLLQQLSVASFIFLSPIQ 341
           W H+ QQ+ + SF  L+P Q
Sbjct: 347 WDHITQQIGMFSFTGLTPAQ 366


  Database: spombe
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 2,362,478
  Number of sequences in database:  5004
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,288,330
Number of Sequences: 5004
Number of extensions: 68681
Number of successful extensions: 206
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 187
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 206
length of database: 2,362,478
effective HSP length: 72
effective length of database: 2,002,190
effective search space used: 390427050
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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