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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS00002
         (719 letters)

Database: spombe 
           5004 sequences; 2,362,478 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SPBC32H8.12c |act1|cps8|actin |Schizosaccharomyces pombe|chr 2||...   163   2e-41
SPAC11H11.06 |arp2|SPAC22F8.01|ARP2/3 actin-organizing complex s...   107   2e-24
SPBC1347.12 |||actin-like protein Arp1 |Schizosaccharomyces pomb...   101   1e-22
SPAC630.03 |arp3|act2|actin-like protein Arp3|Schizosaccharomyce...    84   2e-17
SPBC365.10 |||actin-like protein Arp5 |Schizosaccharomyces pombe...    54   3e-08
SPAC1071.06 |arp9||SWI/SNF and RSC complex subunit Arp9|Schizosa...    53   4e-08
SPBP23A10.08 |alp5|arp4|actin-like protein Arp4|Schizosaccharomy...    52   8e-08
SPCC550.12 |arp6||actin-like protein Arp6|Schizosaccharomyces po...    49   6e-07
SPAC23D3.09 |arp42|arp4|SWI/SNF and RSC complex subunit Arp42|Sc...    45   1e-05
SPAC664.02c |||actin-like protein Arp8 |Schizosaccharomyces pomb...    36   0.008
SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual    32   0.072
SPAPB18E9.04c |||sequence orphan|Schizosaccharomyces pombe|chr 1...    31   0.13 
SPCC18.03 |||shuttle craft like transcriptional regulator|Schizo...    29   0.51 
SPBC30B4.04c |sol1||SWI/SNF complex subunit Sol1|Schizosaccharom...    29   0.67 
SPBC947.01 |||AAA family ATPase, unknown biological role|Schizos...    28   1.2  
SPCC757.09c |rnc1||RNA-binding protein that suppresses calcineur...    27   2.7  
SPBC21D10.12 |hob1||BAR adaptor protein Hob1|Schizosaccharomyces...    27   2.7  
SPCC736.02 |||sequence orphan|Schizosaccharomyces pombe|chr 3|||...    27   3.6  
SPAC6G10.10c |||human hmmtag2 homolog|Schizosaccharomyces pombe|...    26   4.7  
SPBC28F2.12 |rpb1||DNA-directed RNA polymerase II large subunit|...    26   4.7  
SPBC3D6.11c |slx8||ubiquitin-protein ligase E3 Slx8 |Schizosacch...    26   4.7  
SPAC22H10.07 |scd2|ral3|scaffold protein Scd2|Schizosaccharomyce...    26   4.7  
SPAC9G1.06c |cyk3||cytokinesis protein Cyk3|Schizosaccharomyces ...    26   4.7  
SPCC962.01 ||SPCP31B10.09|C2 domain protein|Schizosaccharomyces ...    26   6.2  
SPAC1A6.07 |||sequence orphan|Schizosaccharomyces pombe|chr 1|||...    26   6.2  
SPBC1271.02 |stt3||oligosaccharyltransferase subunit Stt3|Schizo...    26   6.2  
SPCC1020.01c |pma2|SPCC1393.01|P-type proton ATPase Pma2 |Schizo...    25   8.2  
SPBC530.14c |dsk1||SR protein-specific kinase Dsk1|Schizosacchar...    25   8.2  
SPBC8D2.20c |sec31||COPII-coated vesicle component Sec31 |Schizo...    25   8.2  

>SPBC32H8.12c |act1|cps8|actin |Schizosaccharomyces pombe|chr
           2|||Manual
          Length = 375

 Score =  163 bits (397), Expect = 2e-41
 Identities = 77/84 (91%), Positives = 81/84 (96%)
 Frame = +2

Query: 2   ANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPH 181
           +NREKMTQI+FETFN PA YVAIQAVLSLYASGRTTGIVLDSGDGV+HTVPIYEGYALPH
Sbjct: 114 SNREKMTQIIFETFNAPAFYVAIQAVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPH 173

Query: 182 AILRLDLAGRDLTDYLMKILTERG 253
           AI+RLDLAGRDLTDYLMKIL ERG
Sbjct: 174 AIMRLDLAGRDLTDYLMKILMERG 197



 Score =  153 bits (372), Expect = 2e-38
 Identities = 73/84 (86%), Positives = 77/84 (91%)
 Frame = +1

Query: 256 SFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVITIGNERFRCP 435
           +F+TTAEREIVRDIKEKLCYVALDFEQE+ TAA SSSLEKSYELPDGQVITIGNERFR P
Sbjct: 199 TFSTTAEREIVRDIKEKLCYVALDFEQELQTAAQSSSLEKSYELPDGQVITIGNERFRAP 258

Query: 436 EALFQPSFLGMEACGIHETTYNSI 507
           EALFQPS LG+E  GIHE TYNSI
Sbjct: 259 EALFQPSALGLENAGIHEATYNSI 282



 Score = 95.9 bits (228), Expect = 5e-21
 Identities = 47/69 (68%), Positives = 54/69 (78%), Gaps = 1/69 (1%)
 Frame = +3

Query: 510 KCDVDIRKDLYANTVLSGGTTCTLE-SPTVCKRNHSSRPSTMKIKIIAPPERKYSVWIGG 686
           KCDVDIRKDLY N V+SGGTT     +  + K   +  PS+MK+KI+APPERKYSVWIGG
Sbjct: 284 KCDVDIRKDLYGNVVMSGGTTMYPGIADRMQKEIQALAPSSMKVKIVAPPERKYSVWIGG 343

Query: 687 SILASLSTF 713
           SILASLSTF
Sbjct: 344 SILASLSTF 352


>SPAC11H11.06 |arp2|SPAC22F8.01|ARP2/3 actin-organizing complex
           subunit Arp2|Schizosaccharomyces pombe|chr 1|||Manual
          Length = 390

 Score =  107 bits (257), Expect = 2e-24
 Identities = 49/84 (58%), Positives = 63/84 (75%)
 Frame = +2

Query: 2   ANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPH 181
           ANREKM + MFE +    +YVAIQAVLSLYA G ++G+V+DSGDGV+H VP+YE   L H
Sbjct: 114 ANREKMCETMFERYGFGGVYVAIQAVLSLYAQGLSSGVVVDSGDGVTHIVPVYESVVLNH 173

Query: 182 AILRLDLAGRDLTDYLMKILTERG 253
            + RLD+AGRD T YL+ +L  +G
Sbjct: 174 LVGRLDVAGRDATRYLISLLLRKG 197



 Score = 90.6 bits (215), Expect = 2e-19
 Identities = 40/91 (43%), Positives = 62/91 (68%)
 Frame = +1

Query: 244 RARLSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVITIGNER 423
           R   +F  TA+ E VR++KEKLCYV+ D E +   +  ++ L ++Y LPDG+VI +G+ER
Sbjct: 195 RKGYAFNRTADFETVREMKEKLCYVSYDLELDHKLSEETTVLMRNYTLPDGRVIKVGSER 254

Query: 424 FRCPEALFQPSFLGMEACGIHETTYNSIRSA 516
           + CPE LFQP  +G E  G+ E  +++I++A
Sbjct: 255 YECPECLFQPHLVGSEQPGLSEFIFDTIQAA 285



 Score = 41.9 bits (94), Expect = 9e-05
 Identities = 28/78 (35%), Positives = 42/78 (53%), Gaps = 12/78 (15%)
 Frame = +3

Query: 507 QKCDVDIRKDLYANTVLSGGTTCTLESPTVCKRN----------HS--SRPSTMKIKIIA 650
           Q  DVDIRK LY   VLSGG++     P+  ++           H   +R    K+KI  
Sbjct: 283 QAADVDIRKYLYRAIVLSGGSSMYAGLPSRLEKEIKQLWFERVLHGDPARLPNFKVKIED 342

Query: 651 PPERKYSVWIGGSILASL 704
            P R+++V+IGG++LA +
Sbjct: 343 APRRRHAVFIGGAVLADI 360


>SPBC1347.12 |||actin-like protein Arp1 |Schizosaccharomyces
           pombe|chr 2|||Manual
          Length = 379

 Score =  101 bits (241), Expect = 1e-22
 Identities = 43/83 (51%), Positives = 64/83 (77%)
 Frame = +2

Query: 5   NREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHA 184
           N+EK+ +  +ET N PA+  ++Q VL+LYAS RTTGIVL+ GDG++H+VPIY+G+++P A
Sbjct: 120 NKEKIAEYFYETLNVPALSFSLQPVLALYASARTTGIVLECGDGLTHSVPIYDGFSIPSA 179

Query: 185 ILRLDLAGRDLTDYLMKILTERG 253
           I + ++ GRD+TDYL   L + G
Sbjct: 180 IQQEEIGGRDVTDYLQLQLRKSG 202



 Score = 85.4 bits (202), Expect = 7e-18
 Identities = 39/81 (48%), Positives = 51/81 (62%)
 Frame = +1

Query: 265 TTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVITIGNERFRCPEAL 444
           ++AE+EIVR+IKEK CYVA DF  E+ +         +Y+LPD Q IT+G E F  PE L
Sbjct: 207 SSAEKEIVREIKEKCCYVASDFRSEIESWTEHKPQIHTYQLPDNQTITLGTECFSAPEVL 266

Query: 445 FQPSFLGMEACGIHETTYNSI 507
           F P  +G EA G+H   + SI
Sbjct: 267 FNPEMMGSEASGLHIQLFKSI 287



 Score = 58.4 bits (135), Expect = 1e-09
 Identities = 30/67 (44%), Positives = 40/67 (59%), Gaps = 1/67 (1%)
 Frame = +3

Query: 516 DVDIRKDLYANTVLSGGTTCTLE-SPTVCKRNHSSRPSTMKIKIIAPPERKYSVWIGGSI 692
           D+D+R  LY+N VLSGG+T              +      ++KI A PER ++ W+GGSI
Sbjct: 291 DIDLRSTLYSNIVLSGGSTLLRGFGERFISELRAISGKKNQVKIYASPERMHNAWLGGSI 350

Query: 693 LASLSTF 713
           LASLSTF
Sbjct: 351 LASLSTF 357


>SPAC630.03 |arp3|act2|actin-like protein Arp3|Schizosaccharomyces
           pombe|chr 1|||Manual
          Length = 427

 Score = 83.8 bits (198), Expect = 2e-17
 Identities = 41/90 (45%), Positives = 60/90 (66%), Gaps = 8/90 (8%)
 Frame = +2

Query: 5   NREKMTQIMFETFNTPAMYVAIQAVLSLYASGRT--------TGIVLDSGDGVSHTVPIY 160
           NRE   +IMFE+FN   +Y+A+QAVL+L AS  +        TG V+DSGDGV+H +P+ 
Sbjct: 138 NRENTAEIMFESFNCAGLYIAVQAVLALAASWTSSKVTDRSLTGTVVDSGDGVTHIIPVA 197

Query: 161 EGYALPHAILRLDLAGRDLTDYLMKILTER 250
           EGY +  +I  + LAGRD+T ++  +L +R
Sbjct: 198 EGYVIGSSIKTMPLAGRDVTYFVQSLLRDR 227



 Score = 36.7 bits (81), Expect = 0.003
 Identities = 26/84 (30%), Positives = 39/84 (46%), Gaps = 15/84 (17%)
 Frame = +3

Query: 507 QKCDVDIRKDLYANTVLSGGTTCTLE---------SPTVCKRNHSS------RPSTMKIK 641
           Q   +D+RK LY N VLSGG+T                V +R H S      +   + + 
Sbjct: 316 QSSPIDVRKGLYKNIVLSGGSTLFKNFGNRLQRDLKRIVDERIHRSEMLSGAKSGGVDVN 375

Query: 642 IIAPPERKYSVWIGGSILASLSTF 713
           +I+   ++ +VW GGS+LA    F
Sbjct: 376 VISHKRQRNAVWFGGSLLAQTPEF 399



 Score = 29.5 bits (63), Expect = 0.51
 Identities = 21/57 (36%), Positives = 26/57 (45%), Gaps = 4/57 (7%)
 Frame = +1

Query: 295 IKEKLCYVALDFEQEMATAASSSS--LEKSYELPDGQVITI--GNERFRCPEALFQP 453
           IKE+ CYV  D  +E +         L+ + E   G   TI  G ERF  PE  F P
Sbjct: 240 IKEECCYVCPDIVKEFSRFDREPDRYLKYASESITGHSTTIDVGFERFLAPEIFFNP 296


>SPBC365.10 |||actin-like protein Arp5 |Schizosaccharomyces
           pombe|chr 2|||Manual
          Length = 721

 Score = 53.6 bits (123), Expect = 3e-08
 Identities = 24/79 (30%), Positives = 44/79 (55%), Gaps = 2/79 (2%)
 Frame = +2

Query: 8   REKMTQIMFETFNTPAMYVAIQAVLSLYASGR--TTGIVLDSGDGVSHTVPIYEGYALPH 181
           R  MT+++FE +N P++   I  + S Y + +  ++GIVL+ G+  SH +P+  G  +  
Sbjct: 131 RSTMTELLFELYNAPSVAYGIDGLFSFYHNTKPSSSGIVLNLGNAASHVIPVLNGERILS 190

Query: 182 AILRLDLAGRDLTDYLMKI 238
              R+   G   + YL+K+
Sbjct: 191 EAKRISWGGSQSSSYLLKL 209



 Score = 29.1 bits (62), Expect = 0.67
 Identities = 11/24 (45%), Positives = 16/24 (66%)
 Frame = +1

Query: 418 ERFRCPEALFQPSFLGMEACGIHE 489
           E+ R PE +F PS +G++  GI E
Sbjct: 594 EQIRVPEVIFSPSIVGIDQAGILE 617


>SPAC1071.06 |arp9||SWI/SNF and RSC complex subunit
           Arp9|Schizosaccharomyces pombe|chr 1|||Manual
          Length = 523

 Score = 53.2 bits (122), Expect = 4e-08
 Identities = 28/81 (34%), Positives = 42/81 (51%)
 Frame = +2

Query: 5   NREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHA 184
           +RE  TQ  FE    P   +A + ++ LYA G   G+V+D G   +   PI +G  +  A
Sbjct: 161 DRELATQFFFEECQVPGFTIAYEPLMGLYAIGILHGLVIDIGYEKTDITPILDGQIIFTA 220

Query: 185 ILRLDLAGRDLTDYLMKILTE 247
             +L L GR +T +L  +L E
Sbjct: 221 TQQLPLGGRYMTQHLQNLLRE 241


>SPBP23A10.08 |alp5|arp4|actin-like protein Arp4|Schizosaccharomyces
           pombe|chr 2|||Manual
          Length = 433

 Score = 52.0 bits (119), Expect = 8e-08
 Identities = 27/88 (30%), Positives = 43/88 (48%)
 Frame = +2

Query: 5   NREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHA 184
           NR K  + MFE+   PA Y+A Q   + +ASG+ T  ++D G   S    IY+G+ L   
Sbjct: 113 NRVKTLETMFESLRCPATYLAKQETCAAFASGKGTACLVDIGAERSSVSAIYDGFVLQKG 172

Query: 185 ILRLDLAGRDLTDYLMKILTERGSRSLP 268
                 +G  + D L + L ++    +P
Sbjct: 173 YQVQHFSGNAINDILAQTLRDKNFEVMP 200



 Score = 48.8 bits (111), Expect = 8e-07
 Identities = 30/73 (41%), Positives = 46/73 (63%), Gaps = 5/73 (6%)
 Frame = +3

Query: 510 KCDVDIRKDLYANTVLSGGTTCTLESPTVCKRNHSSR--PSTMKIKIIAPP---ERKYSV 674
           +CDVDIR  L  N ++ GGT+  ++  ++  +N  S+  P + ++KI A     ER Y+ 
Sbjct: 337 ECDVDIRASLLNNVIVCGGTSL-MQGFSLRLQNELSKLYPGS-RLKIHASGHVVERSYAS 394

Query: 675 WIGGSILASLSTF 713
           W+GGSIL+SL TF
Sbjct: 395 WLGGSILSSLGTF 407



 Score = 33.1 bits (72), Expect = 0.041
 Identities = 13/35 (37%), Positives = 21/35 (60%)
 Frame = +1

Query: 349 AASSSSLEKSYELPDGQVITIGNERFRCPEALFQP 453
           ++ ++  E  +E PDG  +  G ER++ PE LF P
Sbjct: 254 SSETTIAESEFEFPDGSRMMFGAERYQIPEHLFVP 288


>SPCC550.12 |arp6||actin-like protein Arp6|Schizosaccharomyces
           pombe|chr 3|||Manual
          Length = 401

 Score = 49.2 bits (112), Expect = 6e-07
 Identities = 34/98 (34%), Positives = 46/98 (46%), Gaps = 20/98 (20%)
 Frame = +1

Query: 274 EREIVRDIKEKLCYVALDFEQEMATAASS--SSLEKSYELPD------------------ 393
           E  IV +IKE +CYV+ +F+++M        S LE  Y LPD                  
Sbjct: 211 ETYIVNEIKESVCYVSQNFKEDMEICHEKPRSKLEICYALPDYSTGKHGYIVRDINQKIE 270

Query: 394 GQVITIGNERFRCPEALFQPSFLGMEACGIHETTYNSI 507
            QV+ + NERF  PE LF PS + +   GI E    S+
Sbjct: 271 QQVLNLSNERFMIPELLFSPSDIEIREAGIPEAVMQSV 308



 Score = 38.7 bits (86), Expect = 8e-04
 Identities = 15/46 (32%), Positives = 30/46 (65%)
 Frame = +2

Query: 113 IVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTER 250
           +V+DSG   +H +P+ +      A+ R+D+ G+ LT+YL ++++ R
Sbjct: 159 LVIDSGYSFTHIIPVIDFSVQEQAVKRVDVGGKLLTNYLKEVISYR 204


>SPAC23D3.09 |arp42|arp4|SWI/SNF and RSC complex subunit
           Arp42|Schizosaccharomyces pombe|chr 1|||Manual
          Length = 430

 Score = 45.2 bits (102), Expect = 1e-05
 Identities = 32/93 (34%), Positives = 44/93 (47%), Gaps = 9/93 (9%)
 Frame = +1

Query: 256 SFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVITIGNERFRCP 435
           S+    +R ++ + KE +  V LD   + A A+S +   K +E PDG     G ERFR  
Sbjct: 243 SYEIFQKRRVIEEWKESVLDV-LDTPFDEAKASSRNP--KPFEFPDGVTHKFGQERFRIS 299

Query: 436 EALFQPSFLGMEAC---------GIHETTYNSI 507
           E LF PSF    +          G+HE  Y SI
Sbjct: 300 EILFNPSFSASRSAETTPPQGSVGLHELVYQSI 332



 Score = 33.9 bits (74), Expect = 0.023
 Identities = 22/70 (31%), Positives = 32/70 (45%), Gaps = 3/70 (4%)
 Frame = +3

Query: 513 CDVDIRKDLYANTVLSGGTTCT--LESPTVCKRNHSSRPSTMKIKIIAPPER-KYSVWIG 683
           CD ++R  L  N V++GGT+    L      +    +  S + +           +VW G
Sbjct: 335 CDSELRSPLLNNIVVTGGTSLIPGLSERLQAEVQRLATGSRINVHTAETASATSNAVWFG 394

Query: 684 GSILASLSTF 713
           GSILASL  F
Sbjct: 395 GSILASLDNF 404


>SPAC664.02c |||actin-like protein Arp8 |Schizosaccharomyces
           pombe|chr 1|||Manual
          Length = 620

 Score = 35.5 bits (78), Expect = 0.008
 Identities = 17/77 (22%), Positives = 40/77 (51%)
 Frame = +2

Query: 11  EKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAIL 190
           EK+  I+F   +     +  +++ + + +G +   V+D G   +    + EG  +P++ +
Sbjct: 260 EKILDILFFDLHFGKAAIVQESLCTSFGAGMSAACVVDMGAQKTSISCVEEGVVVPNSRI 319

Query: 191 RLDLAGRDLTDYLMKIL 241
           +++  G D+T   MK+L
Sbjct: 320 KINYGGDDITLLFMKLL 336


>SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual
          Length = 1611

 Score = 32.3 bits (70), Expect = 0.072
 Identities = 17/45 (37%), Positives = 21/45 (46%)
 Frame = +3

Query: 54   PCTSPSKPCSRCTRPVVPPVSCWTPATVSPTPCPSTKDTHSPTPS 188
            P T+P  P    T PV P  S   P+   P P PS++    P PS
Sbjct: 1037 PSTAPPVPIPTSTPPV-PKSSSGAPSAPPPVPAPSSEIPSIPAPS 1080



 Score = 28.3 bits (60), Expect = 1.2
 Identities = 18/51 (35%), Positives = 21/51 (41%), Gaps = 5/51 (9%)
 Frame = +3

Query: 51   PPCTSPSKPCSRCTRPVVPPVSCWTP-----ATVSPTPCPSTKDTHSPTPS 188
            PP  +P  P      P VPP S   P     A + P P P+ K    P PS
Sbjct: 1193 PPSEAPPVPKPSVGVPPVPPPSTAPPVPTPSAGLPPVPVPTAKAPPVPAPS 1243



 Score = 26.6 bits (56), Expect = 3.6
 Identities = 17/48 (35%), Positives = 19/48 (39%), Gaps = 2/48 (4%)
 Frame = +3

Query: 51   PPCTSPSKPCSRCTRP--VVPPVSCWTPATVSPTPCPSTKDTHSPTPS 188
            PP   PS       +P   VPPV    P+   P P PS      P PS
Sbjct: 1092 PPVPKPSVAAPPVPKPSVAVPPVPA--PSGAPPVPKPSVAAPPVPVPS 1137



 Score = 25.8 bits (54), Expect = 6.2
 Identities = 17/48 (35%), Positives = 20/48 (41%), Gaps = 2/48 (4%)
 Frame = +3

Query: 51   PPCTSPSKPCSRCTRPV--VPPVSCWTPATVSPTPCPSTKDTHSPTPS 188
            PP  +PS       +P   VPPV    P+   P P PS      P PS
Sbjct: 1169 PPVPAPSSGIPPVPKPAAGVPPVP--PPSEAPPVPKPSVGVPPVPPPS 1214


>SPAPB18E9.04c |||sequence orphan|Schizosaccharomyces pombe|chr
           1|||Manual
          Length = 800

 Score = 31.5 bits (68), Expect = 0.13
 Identities = 20/55 (36%), Positives = 25/55 (45%), Gaps = 1/55 (1%)
 Frame = +3

Query: 27  SCSKHSTRPPCTSPSKPCSRCTRPVVPPVS-CWTPATVSPTPCPSTKDTHSPTPS 188
           SC+  ++ PP T  S   S    P VPP S   T   + PT   ST    SP P+
Sbjct: 171 SCTTSTSIPP-TGGSSSLSTPITPTVPPTSTSSTSIPIPPTSTSSTDTNSSPLPT 224



 Score = 30.3 bits (65), Expect = 0.29
 Identities = 19/55 (34%), Positives = 25/55 (45%), Gaps = 1/55 (1%)
 Frame = +3

Query: 27  SCSKHSTRPPCTSPSKPCSRCTRPVVPPVS-CWTPATVSPTPCPSTKDTHSPTPS 188
           SC+  ++ PP T  S   S    P VPP S   T   + PT   ST    +P P+
Sbjct: 114 SCTTSTSIPP-TGGSSSLSTPITPTVPPTSTSSTSIPIPPTSTSSTDTNSNPLPT 167



 Score = 27.9 bits (59), Expect = 1.5
 Identities = 19/55 (34%), Positives = 24/55 (43%), Gaps = 1/55 (1%)
 Frame = +3

Query: 27  SCSKHSTRPPCTSPSKPCSRCTRPVVPPVS-CWTPATVSPTPCPSTKDTHSPTPS 188
           SC+  ++ P  T  S   S    P VPP S   T   + PT   ST    SP P+
Sbjct: 228 SCTTSTSIP--TGGSSSLSTPITPTVPPTSTSSTSIPIPPTSTSSTDTNSSPLPT 280



 Score = 27.9 bits (59), Expect = 1.5
 Identities = 17/56 (30%), Positives = 25/56 (44%)
 Frame = +3

Query: 21  PRSCSKHSTRPPCTSPSKPCSRCTRPVVPPVSCWTPATVSPTPCPSTKDTHSPTPS 188
           P S S  ST PP  S S   +  +  +    SC T  ++ PT   +T  T +  P+
Sbjct: 361 PTSTSSTSTPPPPASTSSTGTSSSPLLSTSTSCTTSTSIPPTGNSTTPVTPTVPPT 416



 Score = 27.9 bits (59), Expect = 1.5
 Identities = 19/54 (35%), Positives = 27/54 (50%), Gaps = 1/54 (1%)
 Frame = +3

Query: 27  SCSKHSTRPPCTSPSKPCSRCTRPVVPPVSCWTPATVSPTPC-PSTKDTHSPTP 185
           SC+  ++ PP  + + P +    P VPP S  TP T   T C  ST   ++ TP
Sbjct: 392 SCTTSTSIPPTGNSTTPVT----PTVPPTSSSTPLTT--TNCTTSTSVPYTSTP 439



 Score = 26.6 bits (56), Expect = 3.6
 Identities = 17/56 (30%), Positives = 24/56 (42%)
 Frame = +3

Query: 21  PRSCSKHSTRPPCTSPSKPCSRCTRPVVPPVSCWTPATVSPTPCPSTKDTHSPTPS 188
           P S S  ST PP  S S   +  +       SC T  ++ PT   +T  T +  P+
Sbjct: 307 PTSTSSTSTPPPPASTSSTGTSSSPLPSTSTSCTTSTSIPPTGNSTTPVTPTVPPT 362



 Score = 25.8 bits (54), Expect = 6.2
 Identities = 18/56 (32%), Positives = 21/56 (37%), Gaps = 1/56 (1%)
 Frame = +3

Query: 21  PRSCSKHSTRP-PCTSPSKPCSRCTRPVVPPVSCWTPATVSPTPCPSTKDTHSPTP 185
           P S S   T   P  S S  C+  T   +PP    T       P  ST  T +P P
Sbjct: 319 PASTSSTGTSSSPLPSTSTSCTTSTS--IPPTGNSTTPVTPTVPPTSTSSTSTPPP 372


>SPCC18.03 |||shuttle craft like transcriptional
           regulator|Schizosaccharomyces pombe|chr 3|||Manual
          Length = 1077

 Score = 29.5 bits (63), Expect = 0.51
 Identities = 13/35 (37%), Positives = 16/35 (45%)
 Frame = +3

Query: 75  PCSRCTRPVVPPVSCWTPATVSPTPCPSTKDTHSP 179
           PC+     + PPV+C TP    P  C   K  H P
Sbjct: 621 PCTCGRTRLYPPVACGTPIPDCPYLCVLPKSCHHP 655


>SPBC30B4.04c |sol1||SWI/SNF complex subunit
           Sol1|Schizosaccharomyces pombe|chr 2|||Manual
          Length = 865

 Score = 29.1 bits (62), Expect = 0.67
 Identities = 22/68 (32%), Positives = 33/68 (48%)
 Frame = +2

Query: 251 GSRSLPPPSGKSFVTSRRSCATSLLTSSRKWPPLHPAAPSRSLTNFPTVRSSLSETKDSV 430
           GS     PS  +F  +R S A     SS +  P +P+AP+R     PTV++S S      
Sbjct: 325 GSLHSKSPS-PAFTANRFSPAAPTTVSSERNAPPYPSAPTRPTP--PTVQTSSSAAPVDS 381

Query: 431 AQRLSSNP 454
           A+ ++  P
Sbjct: 382 AEPVAYQP 389


>SPBC947.01 |||AAA family ATPase, unknown biological
           role|Schizosaccharomyces pombe|chr 2|||Manual
          Length = 660

 Score = 28.3 bits (60), Expect = 1.2
 Identities = 21/66 (31%), Positives = 32/66 (48%), Gaps = 2/66 (3%)
 Frame = +2

Query: 260 SLPPPSGKSFVTSRRSCATSLLTSSR--KWPPLHPAAPSRSLTNFPTVRSSLSETKDSVA 433
           S P  S  S V+S    A S L  S+  + PPL P  P  S  +  +  ++ S++  + A
Sbjct: 148 SPPSTSTSSIVSSSYGDAPSYLAPSKPNRSPPLKPEDPFASFNSSASAIAAASKSAAASA 207

Query: 434 QRLSSN 451
             LSS+
Sbjct: 208 SALSSD 213


>SPCC757.09c |rnc1||RNA-binding protein that suppresses calcineurin
           deletion Rnc1|Schizosaccharomyces pombe|chr 3|||Manual
          Length = 398

 Score = 27.1 bits (57), Expect = 2.7
 Identities = 13/29 (44%), Positives = 16/29 (55%)
 Frame = +3

Query: 75  PCSRCTRPVVPPVSCWTPATVSPTPCPST 161
           P SR T+P+    S  +P  VSP   PST
Sbjct: 262 PVSRLTQPLPSLASTASPQQVSPPAAPST 290


>SPBC21D10.12 |hob1||BAR adaptor protein Hob1|Schizosaccharomyces
           pombe|chr 2|||Manual
          Length = 466

 Score = 27.1 bits (57), Expect = 2.7
 Identities = 12/36 (33%), Positives = 15/36 (41%)
 Frame = +3

Query: 51  PPCTSPSKPCSRCTRPVVPPVSCWTPATVSPTPCPS 158
           PP   P    +  T PV  PV+    A   P P P+
Sbjct: 367 PPPVMPQPAAAAVTTPVAAPVAAAAAAVPVPPPAPA 402


>SPCC736.02 |||sequence orphan|Schizosaccharomyces pombe|chr
           3|||Manual
          Length = 286

 Score = 26.6 bits (56), Expect = 3.6
 Identities = 27/92 (29%), Positives = 42/92 (45%), Gaps = 7/92 (7%)
 Frame = +1

Query: 202 SRSRPHRLP--HEDPHRARLSFTTT-AEREIVRDIKEKLC--YVALDFEQEMATAASSSS 366
           SRS  HRL   +  P    + FT +   + I+  I+  L   Y  L    ++     S  
Sbjct: 61  SRSLRHRLSLRNNTPIFMPIDFTLSMVPKSIILSIQRGLLRRYFTLQILTKIDELVISGF 120

Query: 367 LEKS--YELPDGQVITIGNERFRCPEALFQPS 456
           ++KS   ++ DG+VI  G+E F     LF P+
Sbjct: 121 VKKSPNEDIKDGRVIHAGHEGFIPKRILFLPN 152


>SPAC6G10.10c |||human hmmtag2 homolog|Schizosaccharomyces pombe|chr
           1|||Manual
          Length = 194

 Score = 26.2 bits (55), Expect = 4.7
 Identities = 18/51 (35%), Positives = 21/51 (41%)
 Frame = +1

Query: 91  RVRSYHRYRAGLRRRCLPHRAHLRRIRTPPRHPASGLSRSRPHRLPHEDPH 243
           R RS HR+  G  RR  P+R HL R     RH  +     R  R      H
Sbjct: 142 RTRSNHRH--GSHRRHEPYRTHLSRHH---RHSTTNYHSKRDDRYERRREH 187


>SPBC28F2.12 |rpb1||DNA-directed RNA polymerase II large
            subunit|Schizosaccharomyces pombe|chr 2|||Manual
          Length = 1752

 Score = 26.2 bits (55), Expect = 4.7
 Identities = 18/61 (29%), Positives = 27/61 (44%), Gaps = 1/61 (1%)
 Frame = +3

Query: 3    PTERR*PRSCSKHSTRPPCTSPSKPCSRCTRPVVPPVS-CWTPATVSPTPCPSTKDTHSP 179
            PT      +   +S   P  SP+ P    T P   P S  ++P + S +P   T  ++SP
Sbjct: 1580 PTSPSYSPTSPSYSPTSPSYSPTSPSYSATSPSYSPTSPSYSPTSPSYSP---TSPSYSP 1636

Query: 180  T 182
            T
Sbjct: 1637 T 1637


>SPBC3D6.11c |slx8||ubiquitin-protein ligase E3 Slx8
           |Schizosaccharomyces pombe|chr 2|||Manual
          Length = 269

 Score = 26.2 bits (55), Expect = 4.7
 Identities = 16/61 (26%), Positives = 26/61 (42%), Gaps = 2/61 (3%)
 Frame = +2

Query: 353 HPAAPSRSLTNFPTVRSSLSETKDSV--AQRLSSNPRSWVWKLAASTRPHITPSEVRRGH 526
           HPA+   SLTN  ++ +  +   D +      S +PR    K      P  T +E+ +  
Sbjct: 131 HPASVENSLTNVNSIHAQPTTISDMIDLTDETSYDPRK--QKFEQGKNPSTTNAEIEKEE 188

Query: 527 P 529
           P
Sbjct: 189 P 189


>SPAC22H10.07 |scd2|ral3|scaffold protein Scd2|Schizosaccharomyces
           pombe|chr 1|||Manual
          Length = 536

 Score = 26.2 bits (55), Expect = 4.7
 Identities = 15/36 (41%), Positives = 18/36 (50%)
 Frame = -1

Query: 689 RSTDPYGVLPLWRSNDLNLHCRWARAVIPFAYGRRF 582
           R T+   VLPL   +DL   C     V+ FA  RRF
Sbjct: 501 RDTNANKVLPLNNVDDLRKACSQESGVLLFAERRRF 536


>SPAC9G1.06c |cyk3||cytokinesis protein Cyk3|Schizosaccharomyces
           pombe|chr 1|||Manual
          Length = 886

 Score = 26.2 bits (55), Expect = 4.7
 Identities = 22/70 (31%), Positives = 32/70 (45%), Gaps = 6/70 (8%)
 Frame = +2

Query: 263 LPPPSGKSFVTSRRSCATSLLTSSRKWPPLHPA-AP---SRSLTNFPTVRSSLSETKDSV 430
           +PP  G + +TSR     S   SS+    L P  +P   SR ++  P++ SS+    D  
Sbjct: 233 VPPAHGSTSMTSRSKLDDSTDNSSKPRTSLQPGESPMKSSRDISRKPSMASSVLSPSDYF 292

Query: 431 AQ--RLSSNP 454
            Q  R  S P
Sbjct: 293 PQHRRFQSAP 302


>SPCC962.01 ||SPCP31B10.09|C2 domain protein|Schizosaccharomyces
           pombe|chr 3|||Manual
          Length = 1429

 Score = 25.8 bits (54), Expect = 6.2
 Identities = 21/75 (28%), Positives = 35/75 (46%)
 Frame = +2

Query: 236 ILTERGSRSLPPPSGKSFVTSRRSCATSLLTSSRKWPPLHPAAPSRSLTNFPTVRSSLSE 415
           +++ER S S    +G +    + S  ++  TS  + PP    + + SL N P  RSS  E
Sbjct: 19  VVSERASSS--GVNGTNGGMKQVSPVSTARTSIARRPPSTVGSQTGSLVNAPPKRSSGIE 76

Query: 416 TKDSVAQRLSSNPRS 460
             D V     + P++
Sbjct: 77  RFDHVTGTAENRPQT 91


>SPAC1A6.07 |||sequence orphan|Schizosaccharomyces pombe|chr
           1|||Manual
          Length = 636

 Score = 25.8 bits (54), Expect = 6.2
 Identities = 17/62 (27%), Positives = 27/62 (43%)
 Frame = +2

Query: 344 PPLHPAAPSRSLTNFPTVRSSLSETKDSVAQRLSSNPRSWVWKLAASTRPHITPSEVRRG 523
           PP+   +PS SL   P    S +  + S   R ++  +S + K +    P  T S  R+ 
Sbjct: 217 PPIEEYSPSVSLPTSPVAEESYNNVQRSSTVRNNTTQKSVLKKPSRKMSPAYT-SSYRQN 275

Query: 524 HP 529
            P
Sbjct: 276 SP 277


>SPBC1271.02 |stt3||oligosaccharyltransferase subunit
           Stt3|Schizosaccharomyces pombe|chr 2|||Manual
          Length = 752

 Score = 25.8 bits (54), Expect = 6.2
 Identities = 13/40 (32%), Positives = 18/40 (45%)
 Frame = +1

Query: 187 PASGLSRSRPHRLPHEDPHRARLSFTTTAEREIVRDIKEK 306
           P  G  R+R  +LP +DP    +    T    +VR  K K
Sbjct: 677 PNQGYDRARNQKLPSKDPQLFTIEEAFTTVHHLVRLYKVK 716


>SPCC1020.01c |pma2|SPCC1393.01|P-type proton ATPase Pma2
           |Schizosaccharomyces pombe|chr 3|||Manual
          Length = 1010

 Score = 25.4 bits (53), Expect = 8.2
 Identities = 16/37 (43%), Positives = 22/37 (59%)
 Frame = -3

Query: 408 SDDLTVGKFVRLLEGAAGCSGGHFLLEVKSDVAQLLL 298
           +D   VG+   L+ GAAG S GHF  EV + +  +LL
Sbjct: 350 ADSTFVGRAASLV-GAAGQSQGHF-TEVLNGIGTILL 384


>SPBC530.14c |dsk1||SR protein-specific kinase
           Dsk1|Schizosaccharomyces pombe|chr 2|||Manual
          Length = 544

 Score = 25.4 bits (53), Expect = 8.2
 Identities = 15/55 (27%), Positives = 32/55 (58%), Gaps = 1/55 (1%)
 Frame = +2

Query: 299 RRSCATSLLTSSRKWPPLHPAAPSRS-LTNFPTVRSSLSETKDSVAQRLSSNPRS 460
           R++ A +   +S+    + P++P  S L+ FP++  ++SE     +Q+ +S+P S
Sbjct: 276 RKTFAKNPTKNSKPAGQVIPSSPFTSTLSRFPSLEGAVSEISLRDSQKHNSHPNS 330


>SPBC8D2.20c |sec31||COPII-coated vesicle component Sec31
            |Schizosaccharomyces pombe|chr 2|||Manual
          Length = 1224

 Score = 25.4 bits (53), Expect = 8.2
 Identities = 18/50 (36%), Positives = 21/50 (42%), Gaps = 3/50 (6%)
 Frame = +3

Query: 69   SKPCSRCTRPVVPPVSCWT---PATVSPTPCPSTKDTHSPTPSCVWT*PV 209
            S+  S  T P  PP +  T   PA  SP P    +  H PT S     PV
Sbjct: 899  SRTSSVSTLPPPPPTASMTASAPAIASPPPPKVGETYHPPTASGTRVPPV 948


  Database: spombe
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 2,362,478
  Number of sequences in database:  5004
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,304,499
Number of Sequences: 5004
Number of extensions: 73603
Number of successful extensions: 359
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 290
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 344
length of database: 2,362,478
effective HSP length: 71
effective length of database: 2,007,194
effective search space used: 337208592
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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