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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP01_F_C22
         (531 letters)

Database: spombe 
           5004 sequences; 2,362,478 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SPCC1259.01c |rps1802|rps18-2, SPCC825.06c|40S ribosomal protein...   208   3e-55
SPBC16D10.11c |rps1801|rps18-1|40S ribosomal protein S18|Schizos...   208   3e-55
SPCC1795.07 |||mitochondrial ribosomal protein subunit S37 |Schi...    34   0.015
SPBC12C2.08 |dnm1||dynamin Dnm1|Schizosaccharomyces pombe|chr 2|...    28   1.00 
SPAC227.07c |pab1||protein phosphatase regulatory subunit Pab1|S...    26   3.0  
SPAC23E2.03c |ste7||meiotic suppressor protein Ste7|Schizosaccha...    26   4.0  
SPAC1F3.10c |oct1||mitochondrial intermediate peptidase Oct1 |Sc...    25   5.3  
SPBC1734.03 ||SPBC337.19|dihydropteroatesynthase/2-amino-4-hydro...    25   5.3  
SPCC825.05c |||splicing coactivator SRRM1 |Schizosaccharomyces p...    25   5.3  
SPCC417.07c |mto1|mbo1, mod20|MT organizer Mto1|Schizosaccharomy...    25   7.0  
SPBC18E5.14c |||sequence orphan|Schizosaccharomyces pombe|chr 2|...    25   7.0  
SPAC19G12.15c |tpp1||trehalose-6-phosphate phosphatase Tpp1|Schi...    25   9.3  

>SPCC1259.01c |rps1802|rps18-2, SPCC825.06c|40S ribosomal protein
           S18|Schizosaccharomyces pombe|chr 3|||Manual
          Length = 152

 Score =  208 bits (509), Expect = 3e-55
 Identities = 96/129 (74%), Positives = 111/129 (86%)
 Frame = +2

Query: 62  DKFQHILRIMNTNIDGKRKVMFAMTAIKGVGRRYSNIVLKKADIDLDKRAGECTEEEVEK 241
           D FQHILR++NTN+DGK KVMFAMT IKGVGRRY+NIV KKADID+ KRAGE T EE+E+
Sbjct: 7   DNFQHILRLLNTNVDGKVKVMFAMTQIKGVGRRYANIVCKKADIDMSKRAGELTTEELER 66

Query: 242 IITIMSNPRQYKIPDWFLNRQKDIVDGKYSQLTSSNLDSKLREDLERLKKIRAHRGMRHY 421
           I+TI+ NP Q+KIP WFLNRQKDI DGK  QL ++N+DSKLREDLERLKKI+ HRG+RH 
Sbjct: 67  IVTIIQNPSQFKIPSWFLNRQKDINDGKSFQLLANNVDSKLREDLERLKKIQTHRGLRHA 126

Query: 422 WGLRVRGQH 448
             LRVRGQH
Sbjct: 127 LDLRVRGQH 135


>SPBC16D10.11c |rps1801|rps18-1|40S ribosomal protein
           S18|Schizosaccharomyces pombe|chr 2|||Manual
          Length = 152

 Score =  208 bits (509), Expect = 3e-55
 Identities = 96/129 (74%), Positives = 111/129 (86%)
 Frame = +2

Query: 62  DKFQHILRIMNTNIDGKRKVMFAMTAIKGVGRRYSNIVLKKADIDLDKRAGECTEEEVEK 241
           D FQHILR++NTN+DGK KVMFAMT IKGVGRRY+NIV KKADID+ KRAGE T EE+E+
Sbjct: 7   DNFQHILRLLNTNVDGKVKVMFAMTQIKGVGRRYANIVCKKADIDMSKRAGELTTEELER 66

Query: 242 IITIMSNPRQYKIPDWFLNRQKDIVDGKYSQLTSSNLDSKLREDLERLKKIRAHRGMRHY 421
           I+TI+ NP Q+KIP WFLNRQKDI DGK  QL ++N+DSKLREDLERLKKI+ HRG+RH 
Sbjct: 67  IVTIIQNPSQFKIPSWFLNRQKDINDGKSFQLLANNVDSKLREDLERLKKIQTHRGLRHA 126

Query: 422 WGLRVRGQH 448
             LRVRGQH
Sbjct: 127 LDLRVRGQH 135


>SPCC1795.07 |||mitochondrial ribosomal protein subunit S37
           |Schizosaccharomyces pombe|chr 3|||Manual
          Length = 151

 Score = 33.9 bits (74), Expect = 0.015
 Identities = 15/26 (57%), Positives = 18/26 (69%)
 Frame = +2

Query: 371 DLERLKKIRAHRGMRHYWGLRVRGQH 448
           D+ RL  IR +RGMRH  GL V GQ+
Sbjct: 76  DISRLVNIRCYRGMRHVNGLPVNGQN 101


>SPBC12C2.08 |dnm1||dynamin Dnm1|Schizosaccharomyces pombe|chr
           2|||Manual
          Length = 781

 Score = 27.9 bits (59), Expect = 1.00
 Identities = 9/18 (50%), Positives = 13/18 (72%)
 Frame = -2

Query: 110 CHRCSYS*YEEYVEICHF 57
           CH+C    YEE ++ICH+
Sbjct: 458 CHQCVELVYEELMKICHY 475


>SPAC227.07c |pab1||protein phosphatase regulatory subunit
           Pab1|Schizosaccharomyces pombe|chr 1|||Manual
          Length = 463

 Score = 26.2 bits (55), Expect = 3.0
 Identities = 10/37 (27%), Positives = 20/37 (54%)
 Frame = -3

Query: 256 HDSDNFFNLFFCAFASTLVKINVGFFENNVGVPPANT 146
           +++D  F+ F C F+     +  G + NN G+ P ++
Sbjct: 336 YENDCIFDKFECTFSGDDKHVLSGSYSNNFGIYPTDS 372


>SPAC23E2.03c |ste7||meiotic suppressor protein
           Ste7|Schizosaccharomyces pombe|chr 1|||Manual
          Length = 569

 Score = 25.8 bits (54), Expect = 4.0
 Identities = 12/34 (35%), Positives = 18/34 (52%)
 Frame = -2

Query: 374 NLHGVLNPSWRRSAGCIYHQQYPFAYLGTSLVSY 273
           N H  ++PS R S+  +Y    P  Y  ++ VSY
Sbjct: 495 NNHCAVSPSRRSSSNALYLATLPMGYERSNSVSY 528


>SPAC1F3.10c |oct1||mitochondrial intermediate peptidase Oct1
           |Schizosaccharomyces pombe|chr 1|||Manual
          Length = 762

 Score = 25.4 bits (53), Expect = 5.3
 Identities = 12/31 (38%), Positives = 19/31 (61%)
 Frame = +2

Query: 107 GKRKVMFAMTAIKGVGRRYSNIVLKKADIDL 199
           GK+KV+     I  + R+YSN+  +KA+  L
Sbjct: 10  GKKKVIGNRQCILSLYRKYSNVQSRKAEDQL 40


>SPBC1734.03 ||SPBC337.19|dihydropteroatesynthase/2-amino-4-hydroxy-
           6-
           hydroxymethyldihydropteridinediphosphokinase/dihydroneop
           terinaldolase|Schizosaccharomyces pombe|chr 2|||Manual
          Length = 686

 Score = 25.4 bits (53), Expect = 5.3
 Identities = 11/23 (47%), Positives = 14/23 (60%)
 Frame = -3

Query: 100 VRIHDTKNMLKFVILVKFLTNVP 32
           VR+HDTK M K V +   +  VP
Sbjct: 664 VRVHDTKEMSKVVGMANAIRYVP 686


>SPCC825.05c |||splicing coactivator SRRM1 |Schizosaccharomyces
           pombe|chr 3|||Manual
          Length = 301

 Score = 25.4 bits (53), Expect = 5.3
 Identities = 19/67 (28%), Positives = 31/67 (46%)
 Frame = +2

Query: 197 LDKRAGECTEEEVEKIITIMSNPRQYKIPDWFLNRQKDIVDGKYSQLTSSNLDSKLREDL 376
           L+  A   TEE    II+   N  QY IP+ F+  +K+ +     +  +S  +SK   D 
Sbjct: 105 LESNATAFTEELWSLIISASQN--QYGIPEKFILEKKEEISKLKDRTEASKEESKTVTDH 162

Query: 377 ERLKKIR 397
              ++ R
Sbjct: 163 SNRRESR 169


>SPCC417.07c |mto1|mbo1, mod20|MT organizer Mto1|Schizosaccharomyces
            pombe|chr 3|||Manual
          Length = 1115

 Score = 25.0 bits (52), Expect = 7.0
 Identities = 22/89 (24%), Positives = 44/89 (49%), Gaps = 1/89 (1%)
 Frame = +2

Query: 176  LKKADIDLDKRAGECTEEEVEKIITIMSNPRQYKIPDWFLNRQKDIVDGKYSQLTSSNLD 355
            L+K D  L+ R+   ++  +E+ + ++       IP+     ++  +D +  +L  ++ D
Sbjct: 974  LRKLDGVLEARSKRLSQ--LEERVKLLGAGSTSSIPNSPRASKRVSLDSEDKKLVPASPD 1031

Query: 356  -SKLREDLERLKKIRAHRGMRHYWGLRVR 439
             S ++  +  LK  R   GM H W LR+R
Sbjct: 1032 KSAVQRGITALK--RDAEGMSHIWQLRLR 1058


>SPBC18E5.14c |||sequence orphan|Schizosaccharomyces pombe|chr
           2|||Manual
          Length = 127

 Score = 25.0 bits (52), Expect = 7.0
 Identities = 12/40 (30%), Positives = 22/40 (55%)
 Frame = -1

Query: 273 YCLGFDMIVIIFSTSSSVHSPARLSRSMSAFLRTMLEYLR 154
           YC  F  +  +   +  V+SP  ++  M+ F+R +L YL+
Sbjct: 58  YCANFIALFRVIFGTIFVYSPDGITPFMTDFVRWILIYLK 97


>SPAC19G12.15c |tpp1||trehalose-6-phosphate phosphatase
           Tpp1|Schizosaccharomyces pombe|chr 1|||Manual
          Length = 817

 Score = 24.6 bits (51), Expect = 9.3
 Identities = 15/48 (31%), Positives = 20/48 (41%)
 Frame = +1

Query: 340 LLQLGFKTP*RFGEAQEDSRSQRDATLLGPSCAWSAH*DYWQERKNCW 483
           L  L FK+       + D   +R AT +  S  W A+  YWQ     W
Sbjct: 43  LRHLPFKSSINEETREWDLSGRRGATTMYSSMNWLANSTYWQTTLVGW 90


  Database: spombe
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 2,362,478
  Number of sequences in database:  5004
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,188,550
Number of Sequences: 5004
Number of extensions: 45078
Number of successful extensions: 126
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 122
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 126
length of database: 2,362,478
effective HSP length: 68
effective length of database: 2,022,206
effective search space used: 218398248
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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